Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003L14.3
        

               Conread position:
               133-484
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               133-518
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               297, 161
               

               Conread position:
               133-520
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               133-645
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               133-741
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               133-741
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               367, 349
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 207
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               134-669
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               135-485
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               135-539
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               135-735
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               371
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               135-775
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               137-669
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               137-735
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               137-735
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               137-743
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               137-768
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               138-378
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               138-400
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               138-457
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               138-457
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               138-521
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               138-530
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               138-539
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               138-660
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               138-732
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               138-745
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               138-748
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               368
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               285, 271
               

               Conread position:
               139-412
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               139-741
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               368
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               140-660
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               315
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               141-445
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               141-459
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               141-622
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               141-733
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               346
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               141-780
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               145-780
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 90
               

               Conread position:
               146-744
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               357
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 423
               

               Conread position:
               171-524
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               171-743
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 156
               

               Conread position:
               171-780
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 75
               

               Conread position:
               171-780
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 160
               

               Conread position:
               174-707
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               166, 108
               

               Conread position:
               174-776
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 68
               

               Conread position:
               179-679
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               297, 22
               

               Conread position:
               179-740
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 146
               

               Conread position:
               180-764
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 26
               

               Conread position:
               180-776
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               373
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               180-776
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 145
               

               Conread position:
               190-706
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 378
               

               Conread position:
               191-735
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 27
               

               Conread position:
               192-485
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               196-741
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               198-780
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 137
               

               Conread position:
               199-741
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               200-535
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               103, 109
               

               Conread position:
               200-780
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               201-677
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               201-768
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 546
               

               Conread position:
               204-780
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 214
               

               Conread position:
               204-780
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 220
               

               Conread position:
               225-540
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               256, 264
               

               Conread position:
               271-687
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               280-630
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               282-780
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               270, 192
               

               Conread position:
               285-489
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               285-776
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               308-780
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 260
               

               Conread position:
               320-738
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               359-780
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               360-745
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               431-738
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 144
               

               Conread position:
               463-780
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 112
               
Show alignments to all cow chromosomes.