Cow genome map
Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
Conread position: | 133-484 |
Cow position: | chr25:33305782-33305434 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 225 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 40, 23 |
Conread position: | 133-518 |
Cow position: | chr25:34447542-34447916 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 238 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 297, 161 |
Conread position: | 133-520 |
Cow position: | chr25:23420483-23420870 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 264 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 40, 23 |
Conread position: | 133-645 |
Cow position: | chr25:34447374-34447880 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 331 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 36, 18 |
Conread position: | 133-741 |
Cow position: | chr25:34769856-34769247 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 133-741 |
Cow position: | chr25:36800815-36801412 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 367, 349 |
Conread position: | 133-780 |
Cow position: | chr25:33298579-33299227 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 207 |
Conread position: | 133-780 |
Cow position: | chr25:33298999-33299647 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 39 |
Conread position: | 133-780 |
Cow position: | chr25:34770108-34769460 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 134-669 |
Cow position: | chr25:23420316-23420851 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 14 |
Conread position: | 135-485 |
Cow position: | chr25:22235847-22236197 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 221 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 31, 21 |
Conread position: | 135-539 |
Cow position: | chr25:33127820-33128224 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 256 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 32, 21 |
Conread position: | 135-735 |
Cow position: | chr25:36801393-36801990 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 371 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 36, 16 |
Conread position: | 135-775 |
Cow position: | chr25:33157371-33156731 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 15 |
Conread position: | 137-669 |
Cow position: | chr25:33144869-33145399 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 316 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 137-735 |
Cow position: | chr25:33298751-33299350 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 19 |
Conread position: | 137-735 |
Cow position: | chr25:36800735-36801334 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 35 |
Conread position: | 137-743 |
Cow position: | chr25:33157453-33156845 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 21 |
Conread position: | 137-768 |
Cow position: | chr25:34447042-34447674 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 21 |
Conread position: | 137-780 |
Cow position: | chr25:33299171-33299815 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 14 |
Conread position: | 137-780 |
Cow position: | chr25:34769936-34769292 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 15 |
Conread position: | 138-378 |
Cow position: | chr25:33127991-33128231 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 164 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 26, 12 |
Conread position: | 138-400 |
Cow position: | chr25:366746-367008 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 177 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 138-457 |
Cow position: | chr25:22236018-22236337 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 206 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 138-457 |
Cow position: | chr25:33299508-33299827 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 207 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 18 |
Conread position: | 138-521 |
Cow position: | chr25:33305298-33304918 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 240 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 138-530 |
Cow position: | chr25:33127739-33128131 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 22 |
Conread position: | 138-539 |
Cow position: | chr25:346469-346869 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 251 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 138-660 |
Cow position: | chr25:34769767-34769244 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 14 |
Conread position: | 138-732 |
Cow position: | chr25:34447211-34447799 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 138-745 |
Cow position: | chr25:34732587-34731978 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 356 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 138-748 |
Cow position: | chr25:326518-327135 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 368 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 285, 271 |
Conread position: | 139-412 |
Cow position: | chr25:414753-414485 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 182 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 33, 21 |
Conread position: | 139-741 |
Cow position: | chr25:34713888-34714491 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 368 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 140-660 |
Cow position: | chr25:34713973-34714494 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 315 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 32, 10 |
Conread position: | 141-445 |
Cow position: | chr25:23420575-23420879 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 202 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 16, 31 |
Conread position: | 141-459 |
Cow position: | chr25:326947-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 207 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 141-622 |
Cow position: | chr25:33144957-33145436 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 299 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 23, 9 |
Conread position: | 141-733 |
Cow position: | chr25:34762853-34763443 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 346 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 141-780 |
Cow position: | chr25:33298671-33299311 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 22 |
Conread position: | 145-780 |
Cow position: | chr25:36801246-36801871 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 90 |
Conread position: | 146-744 |
Cow position: | chr25:34713810-34714411 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 357 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 23, 423 |
Conread position: | 171-524 |
Cow position: | chr25:18642201-18641845 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 218 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 171-743 |
Cow position: | chr25:34446992-34447566 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 156 |
Conread position: | 171-780 |
Cow position: | chr25:23420200-23420795 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 75 |
Conread position: | 171-780 |
Cow position: | chr25:33157503-33156893 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 160 |
Conread position: | 174-707 |
Cow position: | chr25:34433497-34434025 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 324 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 166, 108 |
Conread position: | 174-776 |
Cow position: | chr25:34770151-34769548 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 68 |
Conread position: | 179-679 |
Cow position: | chr25:33305340-33304845 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 320 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 297, 22 |
Conread position: | 179-740 |
Cow position: | chr25:33299297-33299855 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 146 |
Conread position: | 180-764 |
Cow position: | chr25:33305421-33304844 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 26 |
Conread position: | 180-776 |
Cow position: | chr25:33306318-33305726 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 373 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 127, 36 |
Conread position: | 180-776 |
Cow position: | chr25:36800526-36801123 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 145 |
Conread position: | 190-706 |
Cow position: | chr25:33127707-33128224 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 348, 378 |
Conread position: | 191-735 |
Cow position: | chr25:33305972-33305434 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 27 |
Conread position: | 192-485 |
Cow position: | chr25:326488-326781 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 185 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 196-741 |
Cow position: | chr25:33144844-33145387 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 46 |
Conread position: | 198-780 |
Cow position: | chr25:36801372-36801955 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 137 |
Conread position: | 199-741 |
Cow position: | chr25:33306050-33305513 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 338 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 6, 105 |
Conread position: | 200-535 |
Cow position: | chr25:346447-346782 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 211 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 103, 109 |
Conread position: | 200-780 |
Cow position: | chr25:34446937-34447518 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 124 |
Conread position: | 201-677 |
Cow position: | chr25:22235829-22236306 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 290 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 49, 41 |
Conread position: | 201-768 |
Cow position: | chr25:33298479-33299047 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 340, 546 |
Conread position: | 204-780 |
Cow position: | chr25:33298566-33299143 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 214 |
Conread position: | 204-780 |
Cow position: | chr25:36800634-36801211 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 220 |
Conread position: | 225-540 |
Cow position: | chr25:326947-327262 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 200 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 256, 264 |
Conread position: | 271-687 |
Cow position: | chr25:34732621-34732205 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 252 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 7 |
Conread position: | 280-630 |
Cow position: | chr25:346443-346794 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 223 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 24, 29 |
Conread position: | 282-780 |
Cow position: | chr25:33144846-33145342 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 306 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 270, 192 |
Conread position: | 285-489 |
Cow position: | chr25:34433020-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 134 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 285-776 |
Cow position: | chr25:36800463-36800955 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 301 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 51, 27 |
Conread position: | 308-780 |
Cow position: | chr25:33127741-33128214 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 260 |
Conread position: | 320-738 |
Cow position: | chr25:326448-326867 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 252 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 15 |
Conread position: | 359-780 |
Cow position: | chr25:34446928-34447350 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 252 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 58, 65 |
Conread position: | 360-745 |
Cow position: | chr25:33298470-33298857 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 255 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 41, 76 |
Conread position: | 431-738 |
Cow position: | chr25:18642193-18641882 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 197 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 113, 144 |
Conread position: | 463-780 |
Cow position: | chr25:33127728-33128046 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 203 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 85, 112 |
Show alignments to all cow chromosomes.