Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
| Conread position: | 132-636 |
| Cow position: | chr3:77351058-77350565 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 133-458 |
| Cow position: | chr3:62721889-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 133-585 |
| Cow position: | chr3:68045953-68046407 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 109 |
| Conread position: | 133-743 |
| Cow position: | chr3:62722309-62721697 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 133-747 |
| Cow position: | chr3:62742378-62742989 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 133-780 |
| Cow position: | chr3:62722225-62721577 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 135-408 |
| Cow position: | chr3:68027446-68027719 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 136-568 |
| Cow position: | chr3:68027279-68027712 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 137-540 |
| Cow position: | chr3:62743033-62743431 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 138-661 |
| Cow position: | chr3:68027197-68027721 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 337 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 138-705 |
| Cow position: | chr3:68045790-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 138-741 |
| Cow position: | chr3:68027113-68027717 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 139-741 |
| Cow position: | chr3:77351302-77350707 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 377 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 106 |
| Conread position: | 172-745 |
| Cow position: | chr3:68026979-68027554 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 359 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 172-780 |
| Cow position: | chr3:68045572-68046181 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 158 |
| Conread position: | 174-780 |
| Cow position: | chr3:62742252-62742853 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 101 |
| Conread position: | 179-741 |
| Cow position: | chr3:68045747-68046310 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 180-457 |
| Cow position: | chr3:62743155-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-741 |
| Cow position: | chr3:62742346-62742899 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 187-780 |
| Cow position: | chr3:68027078-68027672 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 204-780 |
| Cow position: | chr3:62722322-62721745 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 136 |
| Conread position: | 221-669 |
| Cow position: | chr3:62743033-62743476 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 287-776 |
| Cow position: | chr3:62722323-62721833 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
Show alignments to all cow chromosomes.