Cow genome map

Conread name: Ss1.1-Pig4-TMW8003L14.3

Conread position: 1-119
Cow position: chr7:42878684-42878566 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-741
Cow position: chr7:8324620-8325358 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 464
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 40

Conread position: 133-458
Cow position: chr7:42878588-42878263 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 23

Conread position: 133-660
Cow position: chr7:8278032-8278558 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 332
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 40

Conread position: 135-741
Cow position: chr7:3179883-3180490 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 135-741
Cow position: chr7:3180135-3180742 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 135-780
Cow position: chr7:42878922-42878276 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 429

Conread position: 135-780
Cow position: chr7:42879006-42878360 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 136-780
Cow position: chr7:1014790-1015435 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 136-780
Cow position: chr7:42879173-42878528 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 113

Conread position: 137-624
Cow position: chr7:3180389-3180876 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 304
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 14

Conread position: 137-698
Cow position: chr7:42878836-42878274 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 105

Conread position: 137-780
Cow position: chr7:1014377-1015015 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 137-780
Cow position: chr7:1439490-1440134 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 98

Conread position: 137-780
Cow position: chr7:3179969-3180613 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 137-780
Cow position: chr7:42879424-42878780 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 138-490
Cow position: chr7:8325762-8326114 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 42

Conread position: 138-490
Cow position: chr7:18390435-18390787 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 18

Conread position: 138-654
Cow position: chr7:18390267-18390784 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 333
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 22

Conread position: 138-707
Cow position: chr7:3180306-3180875 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 138-741
Cow position: chr7:8277281-8277885 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 359
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 19

Conread position: 138-741
Cow position: chr7:8325258-8325862 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 379
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 14

Conread position: 138-780
Cow position: chr7:1014462-1015099 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 398
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 18

Conread position: 139-741
Cow position: chr7:8243408-8244009 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 358
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 35

Conread position: 140-776
Cow position: chr7:42879253-42878616 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 190

Conread position: 141-530
Cow position: chr7:1015047-1015436 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 15

Conread position: 141-741
Cow position: chr7:18390186-18390787 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 141-780
Cow position: chr7:3179721-3180361 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 145-490
Cow position: chr7:11600824-11600478 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 13

Conread position: 171-780
Cow position: chr7:3180255-3180864 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 71

Conread position: 176-747
Cow position: chr7:1439700-1440269 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 60

Conread position: 178-660
Cow position: chr7:8243280-8243762 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 293
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 87

Conread position: 178-741
Cow position: chr7:8325550-8326114 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 353
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 170, 157

Conread position: 179-735
Cow position: chr7:11601209-11600652 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 346
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 63

Conread position: 179-736
Cow position: chr7:8243029-8243586 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 326
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 359, 351

Conread position: 179-741
Cow position: chr7:8242861-8243423 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 328
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 86

Conread position: 179-741
Cow position: chr7:8277574-8278137 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 343
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 18

Conread position: 179-741
Cow position: chr7:8277658-8278221 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 340
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 333, 324

Conread position: 179-747
Cow position: chr7:8277742-8278311 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 352
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 63

Conread position: 179-780
Cow position: chr7:1014335-1014931 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 67

Conread position: 179-780
Cow position: chr7:1439448-1440050 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 140

Conread position: 180-467
Cow position: chr7:1015170-1015457 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 55

Conread position: 180-761
Cow position: chr7:11600956-11600377 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 365
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 70, 61

Conread position: 180-780
Cow position: chr7:1014750-1015351 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 75

Conread position: 180-780
Cow position: chr7:8325048-8325649 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 360
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 336, 314

Conread position: 187-745
Cow position: chr7:18390148-18390708 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 122

Conread position: 187-780
Cow position: chr7:11601117-11600523 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 188-780
Cow position: chr7:1014260-1014847 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 373
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 62

Conread position: 192-780
Cow position: chr7:8243126-8243714 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 344
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 71

Conread position: 198-780
Cow position: chr7:42879277-42878696 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 9

Conread position: 207-741
Cow position: chr7:8242805-8243340 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 328
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 56

Conread position: 223-780
Cow position: chr7:18390016-18390574 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 339
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 87

Conread position: 261-747
Cow position: chr7:1438225-1438712 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 304
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 146, 154

Conread position: 273-747
Cow position: chr7:8277584-8278059 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 292
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 237, 274

Conread position: 275-493
Cow position: chr7:11434497-11434279 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 31

Conread position: 345-741
Cow position: chr7:1439446-1439845 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 192, 142

Conread position: 384-780
Cow position: chr7:3179712-3180109 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 168, 363

Conread position: 430-780
Cow position: chr7:1439447-1439800 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 111, 159

Conread position: 450-741
Cow position: chr7:11601273-11600982 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 183
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 42

Show alignments to all cow chromosomes.