Cow genome map
Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
Conread position: | 1-119 |
Cow position: | chr7:42878684-42878566 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 92 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-741 |
Cow position: | chr7:8324620-8325358 (view UCSC Genome Browser custom track) |
Alignm length: | 759 |
Alignm identity: | 464 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 60, 40 |
Conread position: | 133-458 |
Cow position: | chr7:42878588-42878263 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 133-660 |
Cow position: | chr7:8278032-8278558 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 332 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 23, 40 |
Conread position: | 135-741 |
Cow position: | chr7:3179883-3180490 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 110 |
Conread position: | 135-741 |
Cow position: | chr7:3180135-3180742 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 24 |
Conread position: | 135-780 |
Cow position: | chr7:42878922-42878276 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 403, 429 |
Conread position: | 135-780 |
Cow position: | chr7:42879006-42878360 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 30 |
Conread position: | 136-780 |
Cow position: | chr7:1014790-1015435 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 136-780 |
Cow position: | chr7:42879173-42878528 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 113 |
Conread position: | 137-624 |
Cow position: | chr7:3180389-3180876 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 304 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 137-698 |
Cow position: | chr7:42878836-42878274 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 105 |
Conread position: | 137-780 |
Cow position: | chr7:1014377-1015015 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 137-780 |
Cow position: | chr7:1439490-1440134 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 98 |
Conread position: | 137-780 |
Cow position: | chr7:3179969-3180613 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 137-780 |
Cow position: | chr7:42879424-42878780 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 15 |
Conread position: | 138-490 |
Cow position: | chr7:8325762-8326114 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 225 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 22, 42 |
Conread position: | 138-490 |
Cow position: | chr7:18390435-18390787 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 232 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 138-654 |
Cow position: | chr7:18390267-18390784 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 333 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 138-707 |
Cow position: | chr7:3180306-3180875 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 19 |
Conread position: | 138-741 |
Cow position: | chr7:8277281-8277885 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 359 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 41, 19 |
Conread position: | 138-741 |
Cow position: | chr7:8325258-8325862 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 379 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 22, 14 |
Conread position: | 138-780 |
Cow position: | chr7:1014462-1015099 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 398 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 139-741 |
Cow position: | chr7:8243408-8244009 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 358 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 35 |
Conread position: | 140-776 |
Cow position: | chr7:42879253-42878616 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 190 |
Conread position: | 141-530 |
Cow position: | chr7:1015047-1015436 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 263 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 31, 15 |
Conread position: | 141-741 |
Cow position: | chr7:18390186-18390787 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 30 |
Conread position: | 141-780 |
Cow position: | chr7:3179721-3180361 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 145-490 |
Cow position: | chr7:11600824-11600478 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 222 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 171-780 |
Cow position: | chr7:3180255-3180864 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 71 |
Conread position: | 176-747 |
Cow position: | chr7:1439700-1440269 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 60 |
Conread position: | 178-660 |
Cow position: | chr7:8243280-8243762 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 293 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 74, 87 |
Conread position: | 178-741 |
Cow position: | chr7:8325550-8326114 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 353 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 170, 157 |
Conread position: | 179-735 |
Cow position: | chr7:11601209-11600652 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 346 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 73, 63 |
Conread position: | 179-736 |
Cow position: | chr7:8243029-8243586 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 326 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 359, 351 |
Conread position: | 179-741 |
Cow position: | chr7:8242861-8243423 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 328 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 70, 86 |
Conread position: | 179-741 |
Cow position: | chr7:8277574-8278137 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 343 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 179-741 |
Cow position: | chr7:8277658-8278221 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 340 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 333, 324 |
Conread position: | 179-747 |
Cow position: | chr7:8277742-8278311 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 352 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 77, 63 |
Conread position: | 179-780 |
Cow position: | chr7:1014335-1014931 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 67 |
Conread position: | 179-780 |
Cow position: | chr7:1439448-1440050 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 140 |
Conread position: | 180-467 |
Cow position: | chr7:1015170-1015457 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 197 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 180-761 |
Cow position: | chr7:11600956-11600377 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 365 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 70, 61 |
Conread position: | 180-780 |
Cow position: | chr7:1014750-1015351 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 75 |
Conread position: | 180-780 |
Cow position: | chr7:8325048-8325649 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 360 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 336, 314 |
Conread position: | 187-745 |
Cow position: | chr7:18390148-18390708 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 122 |
Conread position: | 187-780 |
Cow position: | chr7:11601117-11600523 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 55 |
Conread position: | 188-780 |
Cow position: | chr7:1014260-1014847 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 373 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 80, 62 |
Conread position: | 192-780 |
Cow position: | chr7:8243126-8243714 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 344 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 61, 71 |
Conread position: | 198-780 |
Cow position: | chr7:42879277-42878696 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 9 |
Conread position: | 207-741 |
Cow position: | chr7:8242805-8243340 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 328 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 43, 56 |
Conread position: | 223-780 |
Cow position: | chr7:18390016-18390574 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 339 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 76, 87 |
Conread position: | 261-747 |
Cow position: | chr7:1438225-1438712 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 304 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 146, 154 |
Conread position: | 273-747 |
Cow position: | chr7:8277584-8278059 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 292 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 237, 274 |
Conread position: | 275-493 |
Cow position: | chr7:11434497-11434279 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 35, 31 |
Conread position: | 345-741 |
Cow position: | chr7:1439446-1439845 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 254 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 192, 142 |
Conread position: | 384-780 |
Cow position: | chr7:3179712-3180109 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 258 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 168, 363 |
Conread position: | 430-780 |
Cow position: | chr7:1439447-1439800 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 232 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 111, 159 |
Conread position: | 450-741 |
Cow position: | chr7:11601273-11600982 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 183 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 94, 42 |
Show alignments to all cow chromosomes.