Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
| Conread position: | 133-366 |
| Cow position: | chr8:46817153-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 118, 110 |
| Conread position: | 133-705 |
| Cow position: | chr8:48406942-48406369 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 133-742 |
| Cow position: | chr8:46816733-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 133-780 |
| Cow position: | chr8:46815890-46816541 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 385 |
| Conread position: | 133-780 |
| Cow position: | chr8:46816481-46817129 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 192 |
| Conread position: | 133-780 |
| Cow position: | chr8:46816565-46817213 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 198 |
| Conread position: | 133-780 |
| Cow position: | chr8:46816649-46817297 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 133-780 |
| Cow position: | chr8:55580838-55581486 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 133-780 |
| Cow position: | chr8:55580922-55581570 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 135-522 |
| Cow position: | chr8:46816987-46817374 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 135-780 |
| Cow position: | chr8:48407276-48406630 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 136-540 |
| Cow position: | chr8:55581261-55581665 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 136-780 |
| Cow position: | chr8:48407107-48406462 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 120 |
| Conread position: | 137-482 |
| Cow position: | chr8:48406602-48406257 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 137-522 |
| Cow position: | chr8:48406686-48406301 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 137-546 |
| Cow position: | chr8:55581346-55581756 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 137-687 |
| Cow position: | chr8:46816821-46817372 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 137-739 |
| Cow position: | chr8:45201374-45201977 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 137-741 |
| Cow position: | chr8:45201290-45201895 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 137-780 |
| Cow position: | chr8:45200954-45201598 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 137-780 |
| Cow position: | chr8:45201206-45201850 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 137-780 |
| Cow position: | chr8:46816065-46816709 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 137-780 |
| Cow position: | chr8:46816149-46816793 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 427 |
| Conread position: | 137-780 |
| Cow position: | chr8:46816401-46817045 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 378 |
| Conread position: | 137-780 |
| Cow position: | chr8:48407022-48406378 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 396 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 137-780 |
| Cow position: | chr8:48407526-48406882 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 137-780 |
| Cow position: | chr8:55581010-55581654 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 138-780 |
| Cow position: | chr8:48407609-48406966 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 139-780 |
| Cow position: | chr8:45201040-45201682 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 141-408 |
| Cow position: | chr8:55581434-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 162, 169 |
| Conread position: | 141-677 |
| Cow position: | chr8:45201462-45201999 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 156-747 |
| Cow position: | chr8:48407337-48406746 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 14 |
| Conread position: | 179-647 |
| Cow position: | chr8:48406728-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 191-780 |
| Cow position: | chr8:46815864-46816457 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 222 |
| Conread position: | 199-780 |
| Cow position: | chr8:48407630-48407050 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 23 |
| Conread position: | 204-780 |
| Cow position: | chr8:45200937-45201514 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 308-492 |
| Cow position: | chr8:6958057-6957873 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-776 |
| Cow position: | chr8:48407646-48407222 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 181, 192 |
Show alignments to all cow chromosomes.