Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8004A17.3 |
| Conread position: | 4-205 |
| Cow position: | chr11:67774730-67774514 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 7-214 |
| Cow position: | chr11:39530711-39530501 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 46-202 |
| Cow position: | chr11:6604867-6604705 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 46-205 |
| Cow position: | chr11:19703285-19703120 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 46-205 |
| Cow position: | chr11:36901407-36901578 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 46-214 |
| Cow position: | chr11:881573-881744 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 46-214 |
| Cow position: | chr11:5252422-5252598 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 46-215 |
| Cow position: | chr11:5144434-5144609 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 46-219 |
| Cow position: | chr11:5187604-5187424 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 46-220 |
| Cow position: | chr11:37398960-37399133 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 52-205 |
| Cow position: | chr11:37330050-37329893 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 137 |
| Conread position: | 52-215 |
| Cow position: | chr11:37356276-37356443 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 55-214 |
| Cow position: | chr11:39234680-39234517 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 55-214 |
| Cow position: | chr11:39242925-39242762 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 55-214 |
| Cow position: | chr11:41483341-41483498 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 113, 92 |
| Conread position: | 55-228 |
| Cow position: | chr11:85953378-85953209 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 56-205 |
| Cow position: | chr11:51842384-51842538 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 56-220 |
| Cow position: | chr11:9806501-9806663 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 44 |
Show alignments to all cow chromosomes.