Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8004A17.3
        

               Conread position:
               4-214
               

               Cow position:
               chr14:15963622-15963405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               38-214
               

               Cow position:
               chr14:35408346-35408167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               128, 157
               

               Conread position:
               46-214
               

               Cow position:
               chr14:5363346-5363522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               46-222
               

               Cow position:
               chr14:8807759-8807939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               55-217
               

               Cow position:
               chr14:9228597-9228429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               55-231
               

               Cow position:
               chr14:31969623-31969808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 100
               

               Conread position:
               56-216
               

               Cow position:
               chr14:44739794-44739959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               56-230
               

               Cow position:
               chr14:20890972-20890795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               65-215
               

               Cow position:
               chr14:26622060-26621902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.