Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8004A17.3 |
| Conread position: | 7-215 |
| Cow position: | chr17:2134805-2134596 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 45 |
| Conread position: | 17-196 |
| Cow position: | chr17:43730442-43730630 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 46-198 |
| Cow position: | chr17:891637-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 46-214 |
| Cow position: | chr17:1491325-1491501 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 46-214 |
| Cow position: | chr17:4879258-4879433 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 46-214 |
| Cow position: | chr17:15483694-15483523 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 46-214 |
| Cow position: | chr17:21591712-21591539 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 46-223 |
| Cow position: | chr17:6763138-6763326 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 55-213 |
| Cow position: | chr17:38189846-38189688 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 55-214 |
| Cow position: | chr17:1325303-1325466 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 55-214 |
| Cow position: | chr17:11072341-11072506 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 55-214 |
| Cow position: | chr17:25546169-25546002 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 55-216 |
| Cow position: | chr17:1730309-1730477 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 80, 142 |
| Conread position: | 56-216 |
| Cow position: | chr17:24861718-24861885 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 57-204 |
| Cow position: | chr17:17641797-17641644 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 57-214 |
| Cow position: | chr17:11244552-11244716 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 5 |
| Conread position: | 57-216 |
| Cow position: | chr17:21461190-21461357 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.