Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8004A17.3
        

               Conread position:
               46-202
               

               Cow position:
               chr5:22847085-22846924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 110
               

               Conread position:
               46-214
               

               Cow position:
               chr5:2187158-2186986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               128, 39
               

               Conread position:
               55-214
               

               Cow position:
               chr5:17044137-17043974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               55-219
               

               Cow position:
               chr5:46862373-46862205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               55-227
               

               Cow position:
               chr5:67964615-67964790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               56-216
               

               Cow position:
               chr5:8763637-8763803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 103
               

               Conread position:
               57-216
               

               Cow position:
               chr5:47997117-47996951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 102
               
Show alignments to all cow chromosomes.