Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8004A17.3
        

               Conread position:
               45-214
               

               Cow position:
               chr9:15223835-15223658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               46-205
               

               Cow position:
               chr9:21499691-21499529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               55-214
               

               Cow position:
               chr9:5478730-5478887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               125, 94
               

               Conread position:
               55-218
               

               Cow position:
               chr9:6590125-6590296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               56-214
               

               Cow position:
               chr9:44609854-44610014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               56-217
               

               Cow position:
               chr9:10160317-10160154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 145
               

               Conread position:
               61-214
               

               Cow position:
               chr9:6126891-6126738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               119, 94
               
Show alignments to all cow chromosomes.