Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8004A17.3 |
| Conread position: | 4-137 |
| Cow position: | chrX:34626572-34626707 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 46-212 |
| Cow position: | chrX:38741074-38740904 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 66 |
| Conread position: | 46-214 |
| Cow position: | chrX:3450860-3451037 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 46-214 |
| Cow position: | chrX:29145438-29145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 46-218 |
| Cow position: | chrX:33159004-33158824 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 55-204 |
| Cow position: | chrX:27529535-27529383 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 55-205 |
| Cow position: | chrX:38129307-38129467 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 55-215 |
| Cow position: | chrX:25179632-25179471 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 55-216 |
| Cow position: | chrX:16893533-16893363 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 55-218 |
| Cow position: | chrX:36874155-36873987 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 55-223 |
| Cow position: | chrX:35981624-35981454 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 55-251 |
| Cow position: | chrX:37251412-37251219 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 92 |
| Conread position: | 56-212 |
| Cow position: | chrX:832238-832075 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 71-214 |
| Cow position: | chrX:33008530-33008383 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.