Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 129-257
Cow position: chr12:20283625-20283751 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 86

Conread position: 131-258
Cow position: chr12:9143111-9143240 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 9

Conread position: 133-258
Cow position: chr12:17702517-17702386 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 135-256
Cow position: chr12:37770597-37770717 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 11

Conread position: 137-256
Cow position: chr12:30662227-30662108 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 82

Conread position: 138-249
Cow position: chr12:10895824-10895712 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 74

Conread position: 138-256
Cow position: chr12:19502696-19502575 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr12:25805386-25805269 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 82

Conread position: 138-256
Cow position: chr12:34007023-34007144 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr12:36954651-36954534 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 77

Conread position: 138-257
Cow position: chr12:14132020-14131898 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 138-257
Cow position: chr12:25529754-25529876 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-257
Cow position: chr12:31060259-31060137 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr12:3076899-3076776 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:3950627-3950504 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:4008559-4008434 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:5134863-5134987 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:5905781-5905898 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 63

Conread position: 138-258
Cow position: chr12:6241033-6241156 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:7108912-7109031 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 80

Conread position: 138-258
Cow position: chr12:8869159-8869034 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 90

Conread position: 138-258
Cow position: chr12:12017600-12017721 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 79

Conread position: 138-258
Cow position: chr12:12178645-12178765 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 95

Conread position: 138-258
Cow position: chr12:12976462-12976334 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:15358052-15358175 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr12:15429876-15429752 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:17007921-17008048 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:18388558-18388439 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 80

Conread position: 138-258
Cow position: chr12:18937111-18937234 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:19420208-19420093 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr12:19508848-19508725 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr12:20326495-20326617 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 17

Conread position: 138-258
Cow position: chr12:25561094-25561215 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 85

Conread position: 138-258
Cow position: chr12:26782605-26782728 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:26869072-26868952 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 18

Conread position: 138-258
Cow position: chr12:29969299-29969423 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 138-258
Cow position: chr12:30170391-30170511 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 100

Conread position: 138-258
Cow position: chr12:30605432-30605309 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr12:36501229-36501107 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 96

Conread position: 138-258
Cow position: chr12:38036778-38036901 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr12:40307420-40307541 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 83

Conread position: 138-258
Cow position: chr12:44014116-44013993 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr12:45160788-45160664 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr12:48437180-48437057 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 139-256
Cow position: chr12:18020578-18020699 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 139-258
Cow position: chr12:3055862-3055984 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 139-258
Cow position: chr12:3880531-3880409 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 139-258
Cow position: chr12:27055333-27055453 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 139-258
Cow position: chr12:30745438-30745559 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 75

Conread position: 140-256
Cow position: chr12:45820631-45820518 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 141-256
Cow position: chr12:19039885-19039770 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 58

Conread position: 141-257
Cow position: chr12:27803323-27803204 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr12:18123413-18123529 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 77

Conread position: 141-258
Cow position: chr12:18421200-18421080 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 106
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr12:22047196-22047316 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 141-258
Cow position: chr12:23154740-23154621 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 76

Conread position: 141-258
Cow position: chr12:30590503-30590623 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 141-258
Cow position: chr12:30728512-30728392 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr12:35771305-35771185 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 141-258
Cow position: chr12:36118697-36118817 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 141-258
Cow position: chr12:39465305-39465425 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 141-258
Cow position: chr12:39486156-39486276 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr12:42167372-42167491 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 107

Conread position: 142-258
Cow position: chr12:10028624-10028743 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 142-258
Cow position: chr12:31841165-31841284 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 151-258
Cow position: chr12:28804730-28804840 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 153-257
Cow position: chr12:4182957-4182849 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 169-258
Cow position: chr12:19372348-19372259 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.