Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 128-258
Cow position: chr14:32452546-32452414 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 12

Conread position: 132-258
Cow position: chr14:17397318-17397443 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 86

Conread position: 134-258
Cow position: chr14:6233978-6234105 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 90

Conread position: 135-258
Cow position: chr14:25362630-25362506 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 135-258
Cow position: chr14:25378207-25378333 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 135-258
Cow position: chr14:29632598-29632725 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 136-258
Cow position: chr14:17841004-17841128 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 66

Conread position: 136-258
Cow position: chr14:22982167-22982042 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 137-258
Cow position: chr14:5501870-5501994 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 137-258
Cow position: chr14:20640342-20640466 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 138-239
Cow position: chr14:23080241-23080342 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 61

Conread position: 138-244
Cow position: chr14:12559204-12559313 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-247
Cow position: chr14:18811838-18811952 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-249
Cow position: chr14:34199561-34199674 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 138-249
Cow position: chr14:41325155-41325270 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 138-253
Cow position: chr14:17238644-17238526 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 96

Conread position: 138-255
Cow position: chr14:28795957-28795837 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 138-256
Cow position: chr14:38168964-38168845 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 112

Conread position: 138-256
Cow position: chr14:38295995-38296115 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 114

Conread position: 138-256
Cow position: chr14:48427357-48427236 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-257
Cow position: chr14:33791470-33791348 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 138-257
Cow position: chr14:37727170-37727292 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr14:106294-106417 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:4731582-4731459 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr14:7558151-7558270 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 90

Conread position: 138-258
Cow position: chr14:8848529-8848406 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr14:8964824-8964701 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:8989313-8989437 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 138-258
Cow position: chr14:9901451-9901332 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 77

Conread position: 138-258
Cow position: chr14:11507962-11508085 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr14:15518096-15518217 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 138-258
Cow position: chr14:18345450-18345573 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 20

Conread position: 138-258
Cow position: chr14:18904327-18904450 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:19207145-19207022 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 84

Conread position: 138-258
Cow position: chr14:19996599-19996480 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 77

Conread position: 138-258
Cow position: chr14:20712401-20712526 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:20932899-20932776 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr14:21357833-21357712 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 91

Conread position: 138-258
Cow position: chr14:22989315-22989195 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 84

Conread position: 138-258
Cow position: chr14:23154603-23154726 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr14:24894041-24893918 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr14:24922387-24922264 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:25779375-25779252 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:26442057-26442181 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr14:26620900-26620778 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 90

Conread position: 138-258
Cow position: chr14:26654797-26654917 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 95

Conread position: 138-258
Cow position: chr14:27791811-27791688 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr14:27848481-27848359 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 87

Conread position: 138-258
Cow position: chr14:28090691-28090814 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr14:32470909-32470787 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 88

Conread position: 138-258
Cow position: chr14:33326114-33326231 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 23

Conread position: 138-258
Cow position: chr14:35544234-35544357 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr14:36437203-36437325 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 81

Conread position: 138-258
Cow position: chr14:39779034-39778911 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:40034251-40034134 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 77

Conread position: 138-258
Cow position: chr14:42154680-42154803 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:43249866-43249743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr14:47672602-47672724 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 48

Conread position: 138-260
Cow position: chr14:39926472-39926354 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 68

Conread position: 138-261
Cow position: chr14:7317117-7316991 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 139-258
Cow position: chr14:19129791-19129672 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 94

Conread position: 139-258
Cow position: chr14:19513097-19513215 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 79

Conread position: 140-247
Cow position: chr14:20736808-20736698 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 98
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 140-257
Cow position: chr14:2037658-2037773 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 60

Conread position: 140-258
Cow position: chr14:16237226-16237345 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 94

Conread position: 140-258
Cow position: chr14:19189318-19189197 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 140-258
Cow position: chr14:19633461-19633340 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr14:24417162-24417045 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 140-258
Cow position: chr14:27845883-27845762 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr14:36554873-36554994 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 140-258
Cow position: chr14:37131937-37131816 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr14:41211135-41211014 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 141-254
Cow position: chr14:16342162-16342278 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 141-258
Cow position: chr14:8784454-8784343 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 141-258
Cow position: chr14:12856874-12856758 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 78

Conread position: 141-258
Cow position: chr14:18484963-18485083 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr14:21284908-21284788 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr14:23682542-23682424 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 94

Conread position: 141-258
Cow position: chr14:24581202-24581085 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 91

Conread position: 141-258
Cow position: chr14:24796145-24796266 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 141-258
Cow position: chr14:36709401-36709281 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 141-258
Cow position: chr14:39769952-39770072 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 142-235
Cow position: chr14:25682222-25682126 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 142-256
Cow position: chr14:19222158-19222045 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 39

Conread position: 142-258
Cow position: chr14:28304509-28304628 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 41

Conread position: 142-258
Cow position: chr14:28987969-28987853 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 49

Conread position: 142-258
Cow position: chr14:35018479-35018594 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 76

Conread position: 142-258
Cow position: chr14:42918367-42918250 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 75

Conread position: 142-258
Cow position: chr14:47609310-47609429 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr14:48689807-48689687 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 142-260
Cow position: chr14:46489978-46490099 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 82

Conread position: 143-258
Cow position: chr14:14419763-14419645 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 143-258
Cow position: chr14:41128169-41128054 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 90

Conread position: 147-258
Cow position: chr14:20666749-20666863 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 149-258
Cow position: chr14:19372613-19372502 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 66

Conread position: 151-258
Cow position: chr14:11043222-11043332 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 152-258
Cow position: chr14:15054719-15054828 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 165-258
Cow position: chr14:1645938-1646031 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.