Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 130-258
Cow position: chr15:20352169-20352037 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 130-258
Cow position: chr15:30316254-30316385 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 131-258
Cow position: chr15:25208432-25208561 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 113
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 9

Conread position: 135-258
Cow position: chr15:21908264-21908143 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 135-258
Cow position: chr15:38683544-38683419 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 78

Conread position: 137-256
Cow position: chr15:30047208-30047333 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-248
Cow position: chr15:51427496-51427605 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 79

Conread position: 138-256
Cow position: chr15:5658489-5658369 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 17

Conread position: 138-256
Cow position: chr15:6586386-6586507 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 138-256
Cow position: chr15:11658238-11658359 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 109
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr15:20472219-20472339 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 138-256
Cow position: chr15:31202333-31202210 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-257
Cow position: chr15:7430308-7430186 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 138-257
Cow position: chr15:32979707-32979829 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-257
Cow position: chr15:33662821-33662700 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 108

Conread position: 138-257
Cow position: chr15:36435537-36435415 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr15:794686-794809 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:3699955-3700078 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr15:4485471-4485349 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 57

Conread position: 138-258
Cow position: chr15:6530516-6530641 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:8382613-8382733 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 138-258
Cow position: chr15:8665255-8665374 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 67

Conread position: 138-258
Cow position: chr15:9062267-9062390 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:12785763-12785640 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:13387410-13387287 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:16307743-16307620 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:18720641-18720518 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr15:20390371-20390494 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr15:22532568-22532445 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:22751778-22751659 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 76

Conread position: 138-258
Cow position: chr15:23767938-23768055 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 73

Conread position: 138-258
Cow position: chr15:25584762-25584885 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:25666896-25667015 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 88

Conread position: 138-258
Cow position: chr15:27123223-27123346 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr15:31283695-31283572 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr15:31857919-31857796 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:33303660-33303539 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 45

Conread position: 138-258
Cow position: chr15:36787635-36787512 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:37381958-37381835 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:38883483-38883360 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr15:41583237-41583118 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 82

Conread position: 138-258
Cow position: chr15:45245223-45245339 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 138-258
Cow position: chr15:45479334-45479214 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 85

Conread position: 138-258
Cow position: chr15:50957468-50957589 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 98

Conread position: 138-260
Cow position: chr15:18206184-18206306 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 82

Conread position: 138-261
Cow position: chr15:23798192-23798319 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 139-256
Cow position: chr15:6905867-6905747 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 139-256
Cow position: chr15:43030696-43030815 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 139-258
Cow position: chr15:241173-241051 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 139-258
Cow position: chr15:1329773-1329895 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 139-258
Cow position: chr15:22168384-22168266 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 76

Conread position: 139-258
Cow position: chr15:44810865-44810743 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 140-247
Cow position: chr15:36354840-36354730 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 140-255
Cow position: chr15:47042312-47042430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 140-256
Cow position: chr15:14505751-14505635 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 51

Conread position: 140-256
Cow position: chr15:25365982-25365862 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr15:10450577-10450698 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr15:14871071-14870950 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr15:17084537-17084416 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr15:22137007-22136890 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 78

Conread position: 140-258
Cow position: chr15:26158292-26158409 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 70

Conread position: 141-242
Cow position: chr15:26922655-26922757 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 76

Conread position: 141-256
Cow position: chr15:1083055-1083166 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 141-257
Cow position: chr15:143907-144025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 105

Conread position: 141-258
Cow position: chr15:6970310-6970190 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 81

Conread position: 141-258
Cow position: chr15:9871086-9871206 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 141-258
Cow position: chr15:21832100-21832217 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 85

Conread position: 141-258
Cow position: chr15:23332557-23332673 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 73

Conread position: 141-258
Cow position: chr15:26896387-26896507 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr15:29861685-29861566 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 141-258
Cow position: chr15:30002014-30001893 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 141-258
Cow position: chr15:36422980-36422861 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 14

Conread position: 141-258
Cow position: chr15:39406059-39405939 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr15:47105361-47105241 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 142-257
Cow position: chr15:16476421-16476540 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 142-258
Cow position: chr15:17196468-17196349 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 142-258
Cow position: chr15:21523113-21522995 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 59

Conread position: 142-258
Cow position: chr15:23703096-23702982 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 94

Conread position: 142-258
Cow position: chr15:33243481-33243361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr15:40423326-40423445 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 142-267
Cow position: chr15:23905362-23905487 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 58

Conread position: 143-258
Cow position: chr15:15881257-15881139 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 143-258
Cow position: chr15:36391994-36391875 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 151-258
Cow position: chr15:10456696-10456805 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 50

Conread position: 151-258
Cow position: chr15:12359563-12359453 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 153-256
Cow position: chr15:43673596-43673701 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 59

Show alignments to all cow chromosomes.