Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 130-258
Cow position: chr18:3044154-3044283 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 29

Conread position: 131-258
Cow position: chr18:8105218-8105097 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 131-258
Cow position: chr18:10904571-10904698 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 59

Conread position: 132-258
Cow position: chr18:19761422-19761549 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 106

Conread position: 138-247
Cow position: chr18:20998888-20998776 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-254
Cow position: chr18:8967728-8967845 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 98

Conread position: 138-256
Cow position: chr18:4316037-4316157 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 65

Conread position: 138-256
Cow position: chr18:4490144-4490023 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 138-256
Cow position: chr18:15881127-15881011 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 138-256
Cow position: chr18:16227291-16227412 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-256
Cow position: chr18:20864713-20864834 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr18:23447352-23447235 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 80

Conread position: 138-256
Cow position: chr18:48290708-48290590 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 68

Conread position: 138-256
Cow position: chr18:48407519-48407640 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 138-256
Cow position: chr18:51691738-51691617 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 138-257
Cow position: chr18:3027635-3027514 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 138-257
Cow position: chr18:3180150-3180268 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 80

Conread position: 138-257
Cow position: chr18:5486981-5487098 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 63

Conread position: 138-258
Cow position: chr18:2592443-2592320 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:6275546-6275669 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr18:6290514-6290636 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr18:6309810-6309932 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 95

Conread position: 138-258
Cow position: chr18:7076493-7076618 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 138-258
Cow position: chr18:7649724-7649846 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 61

Conread position: 138-258
Cow position: chr18:9365642-9365765 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:11680450-11680573 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:11811709-11811825 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 86

Conread position: 138-258
Cow position: chr18:13359792-13359913 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:14048443-14048563 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 55

Conread position: 138-258
Cow position: chr18:14586746-14586623 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 17

Conread position: 138-258
Cow position: chr18:18976814-18976937 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:22121152-22121032 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 74

Conread position: 138-258
Cow position: chr18:28101356-28101480 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 109
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:31082590-31082478 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:32873313-32873442 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr18:34527372-34527250 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 88

Conread position: 138-258
Cow position: chr18:35827685-35827560 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:38985417-38985540 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:39115414-39115291 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr18:39709620-39709740 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 85

Conread position: 138-258
Cow position: chr18:43065239-43065363 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr18:44484028-44483906 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 24

Conread position: 138-258
Cow position: chr18:47868185-47868308 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr18:48453423-48453543 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 95

Conread position: 138-258
Cow position: chr18:49161726-49161603 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:49200370-49200493 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr18:51712979-51712856 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-261
Cow position: chr18:17004980-17005106 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 138-262
Cow position: chr18:45104716-45104588 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 17

Conread position: 138-263
Cow position: chr18:7359464-7359593 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 139-248
Cow position: chr18:24834861-24834749 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 139-256
Cow position: chr18:23766685-23766566 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 32

Conread position: 139-258
Cow position: chr18:2569532-2569653 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 104

Conread position: 139-258
Cow position: chr18:5578033-5578155 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 139-258
Cow position: chr18:11322320-11322445 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 139-258
Cow position: chr18:28658183-28658060 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 139-258
Cow position: chr18:30794165-30794283 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 79

Conread position: 139-258
Cow position: chr18:52637797-52637675 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 140-256
Cow position: chr18:19619680-19619799 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 140-256
Cow position: chr18:41270822-41270942 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 140-256
Cow position: chr18:55782690-55782571 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr18:19645907-19646026 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 93

Conread position: 140-258
Cow position: chr18:43640491-43640609 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 8

Conread position: 140-258
Cow position: chr18:46727328-46727449 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 141-255
Cow position: chr18:1144461-1144344 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 141-257
Cow position: chr18:2270771-2270652 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 141-257
Cow position: chr18:22790342-22790224 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 106

Conread position: 141-258
Cow position: chr18:4182458-4182339 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 42

Conread position: 141-258
Cow position: chr18:10954207-10954327 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 141-258
Cow position: chr18:11671542-11671662 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr18:16417964-16417846 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 107

Conread position: 141-258
Cow position: chr18:21768360-21768479 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 100

Conread position: 141-258
Cow position: chr18:29065640-29065525 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 29

Conread position: 141-258
Cow position: chr18:29356897-29356778 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 82

Conread position: 141-258
Cow position: chr18:35535553-35535434 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 67

Conread position: 141-258
Cow position: chr18:37703112-37702995 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 85

Conread position: 141-258
Cow position: chr18:43823220-43823100 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr18:51211914-51212035 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 141-258
Cow position: chr18:51595308-51595188 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr18:55552698-55552818 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr18:9974592-9974475 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 74

Conread position: 142-258
Cow position: chr18:11691678-11691559 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr18:13293243-13293359 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 96

Conread position: 142-258
Cow position: chr18:33407344-33407464 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 143-256
Cow position: chr18:38670377-38670263 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 86

Conread position: 143-258
Cow position: chr18:4625630-4625748 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 143-258
Cow position: chr18:11183676-11183794 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 144-258
Cow position: chr18:44262358-44262474 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 104

Conread position: 150-258
Cow position: chr18:10977466-10977358 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 151-256
Cow position: chr18:5991240-5991348 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 151-258
Cow position: chr18:24734860-24734970 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 151-258
Cow position: chr18:26938726-26938834 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 57

Conread position: 151-258
Cow position: chr18:56183680-56183790 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 156-258
Cow position: chr18:42479838-42479739 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 162-255
Cow position: chr18:33882902-33882808 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.