Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 130-258
Cow position: chr21:17643155-17643022 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 131-258
Cow position: chr21:9028439-9028569 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 136-258
Cow position: chr21:14125869-14125993 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 98

Conread position: 137-258
Cow position: chr21:18842413-18842289 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-248
Cow position: chr21:11173793-11173906 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 138-256
Cow position: chr21:4795048-4795170 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 87

Conread position: 138-256
Cow position: chr21:18845189-18845072 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 35

Conread position: 138-256
Cow position: chr21:40133981-40134103 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 138-256
Cow position: chr21:41198585-41198464 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-257
Cow position: chr21:42465655-42465777 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:802468-802350 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 63

Conread position: 138-258
Cow position: chr21:2679378-2679501 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:2785951-2785831 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 138-258
Cow position: chr21:4080180-4080301 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 17

Conread position: 138-258
Cow position: chr21:7716965-7716842 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:8549503-8549624 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 109

Conread position: 138-258
Cow position: chr21:9278198-9278321 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:9416068-9416191 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:9990340-9990461 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:11877210-11877328 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 138-258
Cow position: chr21:12616965-12617082 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 77

Conread position: 138-258
Cow position: chr21:13488345-13488467 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 98

Conread position: 138-258
Cow position: chr21:13489468-13489590 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 88

Conread position: 138-258
Cow position: chr21:14464403-14464524 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 16

Conread position: 138-258
Cow position: chr21:17511602-17511722 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 56

Conread position: 138-258
Cow position: chr21:19196342-19196218 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 138-258
Cow position: chr21:19258652-19258774 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 82

Conread position: 138-258
Cow position: chr21:19363638-19363518 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 96

Conread position: 138-258
Cow position: chr21:20162361-20162483 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 138-258
Cow position: chr21:22718955-22718834 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 96

Conread position: 138-258
Cow position: chr21:23586702-23586825 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 138-258
Cow position: chr21:24222712-24222593 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr21:28027629-28027749 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 85

Conread position: 138-258
Cow position: chr21:28029223-28029346 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:28190854-28190977 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr21:28599597-28599721 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:28626067-28626185 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 138-258
Cow position: chr21:28993800-28993677 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:29002336-29002213 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr21:33350568-33350691 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:33562841-33562958 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 61

Conread position: 138-258
Cow position: chr21:33982984-33982860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 138-258
Cow position: chr21:35897308-35897427 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 83

Conread position: 138-258
Cow position: chr21:36819387-36819268 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr21:37479782-37479904 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 91

Conread position: 138-258
Cow position: chr21:38900599-38900723 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 138-258
Cow position: chr21:40589657-40589534 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:40786496-40786619 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:40899162-40899285 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:41155687-41155808 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 19

Conread position: 138-258
Cow position: chr21:41974553-41974430 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:42348852-42348729 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr21:42384331-42384454 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:42540394-42540271 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr21:42913920-42913799 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 80

Conread position: 138-258
Cow position: chr21:44671579-44671702 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:45330782-45330659 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr21:49145273-49145154 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 138-260
Cow position: chr21:4279458-4279583 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-261
Cow position: chr21:15445253-15445130 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 96

Conread position: 138-261
Cow position: chr21:30231877-30231750 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 139-256
Cow position: chr21:17218788-17218672 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 139-258
Cow position: chr21:5153444-5153562 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 76

Conread position: 139-258
Cow position: chr21:42500859-42500982 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 140-253
Cow position: chr21:31691306-31691422 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 140-258
Cow position: chr21:3361187-3361067 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 105

Conread position: 140-258
Cow position: chr21:24858139-24858260 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 140-258
Cow position: chr21:25536824-25536942 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 140-258
Cow position: chr21:28919797-28919677 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr21:33210026-33210147 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr21:33263677-33263794 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 54

Conread position: 140-261
Cow position: chr21:18568822-18568701 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 93

Conread position: 141-258
Cow position: chr21:393850-393970 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr21:11706923-11706803 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 141-258
Cow position: chr21:18494794-18494914 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 141-258
Cow position: chr21:18828481-18828361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr21:27863691-27863571 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr21:29069500-29069384 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 74

Conread position: 141-258
Cow position: chr21:29484812-29484924 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 82

Conread position: 141-258
Cow position: chr21:30990440-30990325 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 60

Conread position: 141-258
Cow position: chr21:36297307-36297435 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 142-247
Cow position: chr21:7132633-7132525 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr21:426619-426738 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr21:725062-724941 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr21:28443548-28443429 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 142-258
Cow position: chr21:42135794-42135675 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 142-258
Cow position: chr21:48251200-48251081 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 143-257
Cow position: chr21:23322253-23322136 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 143-258
Cow position: chr21:13409992-13409874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 143-258
Cow position: chr21:43357430-43357316 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 143-260
Cow position: chr21:12961071-12960952 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 11

Conread position: 144-254
Cow position: chr21:23311113-23311003 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 144-257
Cow position: chr21:4998655-4998542 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 71

Conread position: 144-258
Cow position: chr21:28211028-28211146 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 150-258
Cow position: chr21:47760613-47760724 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 152-258
Cow position: chr21:32297671-32297562 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.