Cow genome map

Conread name: Ss1.1-Pig4-TMW8005D07.5

Conread position: 131-258
Cow position: chr25:7329295-7329427 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 135-258
Cow position: chr25:9642111-9642236 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 92

Conread position: 135-258
Cow position: chr25:19478447-19478571 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 136-256
Cow position: chr25:20023635-20023512 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 138-237
Cow position: chr25:33664136-33664034 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-243
Cow position: chr25:14809070-14809179 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 58

Conread position: 138-247
Cow position: chr25:12174745-12174633 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-252
Cow position: chr25:33457466-33457583 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 138-252
Cow position: chr25:33687136-33687020 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 112

Conread position: 138-253
Cow position: chr25:22203930-22203811 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 138-254
Cow position: chr25:16691276-16691395 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr25:3992550-3992671 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 138-256
Cow position: chr25:6003231-6003110 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr25:18988136-18988257 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr25:20211326-20211201 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-256
Cow position: chr25:25051624-25051504 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 101

Conread position: 138-257
Cow position: chr25:9961418-9961295 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 138-257
Cow position: chr25:10330634-10330520 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 138-257
Cow position: chr25:10643550-10643428 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:1735556-1735433 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:3145606-3145723 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr25:4547960-4547837 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr25:5847046-5846924 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 17

Conread position: 138-258
Cow position: chr25:7800896-7801019 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:8918518-8918392 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:10137858-10137977 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 72

Conread position: 138-258
Cow position: chr25:11585278-11585401 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:11830136-11830021 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 63

Conread position: 138-258
Cow position: chr25:12117226-12117109 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 138-258
Cow position: chr25:13720778-13720660 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 52

Conread position: 138-258
Cow position: chr25:14191536-14191413 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr25:14791512-14791633 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 72

Conread position: 138-258
Cow position: chr25:15714641-15714764 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr25:16319372-16319251 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 85

Conread position: 138-258
Cow position: chr25:16922034-16921911 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 138-258
Cow position: chr25:18075429-18075551 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 138-258
Cow position: chr25:18448597-18448720 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr25:19679102-19679225 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 138-258
Cow position: chr25:20348618-20348738 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 84

Conread position: 138-258
Cow position: chr25:21289100-21289223 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr25:23324604-23324481 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 138-258
Cow position: chr25:26238631-26238750 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 82

Conread position: 138-258
Cow position: chr25:27821171-27821294 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 138-258
Cow position: chr25:30319689-30319570 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 80

Conread position: 138-258
Cow position: chr25:31732976-31732854 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 106

Conread position: 138-258
Cow position: chr25:33550266-33550388 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 17

Conread position: 138-258
Cow position: chr25:33959500-33959381 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 138-258
Cow position: chr25:36026767-36026887 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 85

Conread position: 138-258
Cow position: chr25:36037020-36036901 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 79

Conread position: 138-261
Cow position: chr25:17475764-17475635 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 139-258
Cow position: chr25:15694745-15694861 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 71

Conread position: 139-258
Cow position: chr25:20460884-20461006 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 139-261
Cow position: chr25:12817132-12817258 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 140-257
Cow position: chr25:12097604-12097722 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 108

Conread position: 140-258
Cow position: chr25:9842763-9842883 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 41

Conread position: 140-258
Cow position: chr25:12778770-12778649 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 140-258
Cow position: chr25:18935112-18934993 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 82

Conread position: 140-258
Cow position: chr25:21209186-21209065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr25:21895124-21895007 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 78

Conread position: 140-258
Cow position: chr25:24452407-24452289 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 21

Conread position: 140-258
Cow position: chr25:26087277-26087398 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 140-258
Cow position: chr25:36081635-36081756 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 141-256
Cow position: chr25:28188186-28188071 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 92

Conread position: 141-257
Cow position: chr25:11662057-11661938 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:5514769-5514889 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:7581665-7581545 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:12261131-12261014 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 141-258
Cow position: chr25:12293988-12293867 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 141-258
Cow position: chr25:13380853-13380733 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 141-258
Cow position: chr25:14196619-14196739 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:16866994-16867112 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 141-258
Cow position: chr25:20069483-20069603 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:25827225-25827345 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:33691316-33691436 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 141-258
Cow position: chr25:40321530-40321410 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 141-260
Cow position: chr25:30279444-30279323 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 109

Conread position: 142-258
Cow position: chr25:10010958-10010839 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 142-258
Cow position: chr25:13566607-13566726 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr25:20402956-20402837 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr25:21193180-21193061 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 142-258
Cow position: chr25:36746682-36746563 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 142-260
Cow position: chr25:14266740-14266622 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 73

Conread position: 143-258
Cow position: chr25:6474334-6474216 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 143-258
Cow position: chr25:21245842-21245728 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 72

Conread position: 151-258
Cow position: chr25:35902012-35902121 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 47

Conread position: 159-258
Cow position: chr25:12899536-12899636 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 95

Show alignments to all cow chromosomes.