Cow genome map

Conread name: Ss1.1-Pig4-TMW8006F06.5

Conread position: 353-685
Cow position: chr13:43850730-43851077 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 21

Conread position: 883-1008
Cow position: chr13:58740514-58740387 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 58

Conread position: 886-1008
Cow position: chr13:32774410-32774535 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 887-1008
Cow position: chr13:20538610-20538735 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 892-992
Cow position: chr13:30469190-30469289 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 892-992
Cow position: chr13:35686302-35686203 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 892-994
Cow position: chr13:561460-561562 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:644863-644761 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:1591230-1591332 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:2725884-2725986 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:3021559-3021661 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:3556338-3556236 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:3651517-3651619 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:3657424-3657526 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:4486779-4486677 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:4944316-4944214 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 94
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:6360793-6360691 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:6719238-6719340 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:9112701-9112599 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:9301096-9300995 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 892-994
Cow position: chr13:9536927-9537029 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:13902782-13902681 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 892-994
Cow position: chr13:14303058-14303159 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 892-994
Cow position: chr13:14400151-14400253 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:15921531-15921633 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:17921587-17921689 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:18330199-18330301 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:28526383-28526485 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:30243148-30243046 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:30306112-30306010 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:31608513-31608615 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:31725752-31725852 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 892-994
Cow position: chr13:31989800-31989698 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:32716843-32716945 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:32734261-32734362 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 892-994
Cow position: chr13:33523032-33523134 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:34039415-34039517 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 94
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:34322048-34322150 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:34345230-34345128 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:34870886-34870784 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:35760475-35760373 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:38612150-38612048 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:39911331-39911229 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:41337743-41337845 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:53157463-53157565 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr13:58313258-58313156 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr13:19638079-19637976 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr13:25694425-25694322 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr13:61954168-61954066 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 892-1002
Cow position: chr13:32922384-32922494 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr13:8781834-8781719 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr13:18097696-18097811 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr13:31510070-31509958 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 892-1007
Cow position: chr13:32080802-32080687 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr13:50112392-50112277 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr13:3784062-3783946 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr13:20571784-20571900 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr13:23266903-23267019 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr13:24237456-24237342 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 892-1008
Cow position: chr13:30794788-30794904 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr13:34905648-34905764 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1009
Cow position: chr13:19239833-19239716 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1009
Cow position: chr13:47574634-47574749 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 893-992
Cow position: chr13:11254722-11254822 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 893-994
Cow position: chr13:6665203-6665304 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 893-994
Cow position: chr13:43975026-43975127 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 93
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1006
Cow position: chr13:49806137-49806250 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr13:7609070-7608955 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 97

Conread position: 893-1008
Cow position: chr13:9571076-9571191 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr13:11826827-11826942 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr13:14737817-14737702 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr13:20484089-20483974 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1009
Cow position: chr13:11795770-11795891 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 894-994
Cow position: chr13:43120625-43120725 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 894-1008
Cow position: chr13:16249018-16249135 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 897-998
Cow position: chr13:522568-522466 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 897-1008
Cow position: chr13:3314549-3314438 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr13:5622778-5622889 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr13:36347199-36347310 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 898-991
Cow position: chr13:20778540-20778631 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 909-994
Cow position: chr13:15278903-15278988 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.