Cow genome map

Conread name: Ss1.1-Pig4-TMW8006F06.5

Conread position: 356-673
Cow position: chr16:28156795-28156462 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 166

Conread position: 444-816
Cow position: chr16:10770108-10769741 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 236
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 61

Conread position: 840-1009
Cow position: chr16:39416337-39416506 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 887-994
Cow position: chr16:12535481-12535588 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 887-1008
Cow position: chr16:1958262-1958386 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 892-992
Cow position: chr16:1734191-1734091 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-993
Cow position: chr16:3148578-3148679 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-993
Cow position: chr16:40293718-40293819 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-993
Cow position: chr16:53612255-53612156 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 892-994
Cow position: chr16:193483-193586 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 892-994
Cow position: chr16:417347-417245 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:658413-658311 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:839733-839634 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 892-994
Cow position: chr16:1563936-1564035 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 892-994
Cow position: chr16:2408442-2408544 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:2480696-2480794 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 892-994
Cow position: chr16:2724772-2724874 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:3769558-3769660 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:5435277-5435175 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 94
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:5488222-5488120 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:7467065-7466963 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:7674009-7674110 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 892-994
Cow position: chr16:8813650-8813752 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:10440691-10440589 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:11633392-11633494 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:12160828-12160930 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:14352229-14352331 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:14662656-14662758 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:15187520-15187418 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:15349695-15349797 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:15494910-15494808 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:15570221-15570119 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:15979926-15980028 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:18975320-18975219 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 892-994
Cow position: chr16:19081504-19081402 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:21018011-21017909 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:22799252-22799354 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:23249517-23249619 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:23533547-23533647 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 892-994
Cow position: chr16:23985765-23985662 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 94
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 892-994
Cow position: chr16:24240948-24241050 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:24621245-24621347 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:25344430-25344328 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:25444330-25444228 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:25455008-25455111 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 892-994
Cow position: chr16:26388713-26388815 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:26666156-26666054 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:27730929-27731031 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:28206659-28206761 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:29049884-29049782 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:34532746-34532644 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:37053490-37053388 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:37446246-37446348 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:37478408-37478510 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:41515584-41515482 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:42210948-42210846 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:43894810-43894912 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:44256671-44256773 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:46102165-46102266 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 892-994
Cow position: chr16:47403834-47403732 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:48411087-48410985 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:52526685-52526583 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr16:54479658-54479556 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr16:4426543-4426440 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr16:4461859-4461962 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr16:7022353-7022250 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr16:27593370-27593473 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr16:41033752-41033650 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 892-995
Cow position: chr16:41164319-41164422 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr16:30052401-30052286 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr16:15179134-15179018 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr16:15804758-15804642 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr16:27710749-27710863 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 892-1008
Cow position: chr16:45608867-45608751 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1009
Cow position: chr16:8482168-8482283 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 893-994
Cow position: chr16:28468672-28468773 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1003
Cow position: chr16:25088059-25087949 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1006
Cow position: chr16:37455026-37455139 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1007
Cow position: chr16:20204455-20204340 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 893-1007
Cow position: chr16:51087235-51087121 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr16:12244590-12244705 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr16:23364462-23364575 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 893-1008
Cow position: chr16:50712988-50713103 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 895-988
Cow position: chr16:25453077-25453170 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 895-995
Cow position: chr16:7155049-7154949 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 897-994
Cow position: chr16:40981-40885 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 897-994
Cow position: chr16:37486809-37486906 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr16:15256022-15256134 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 897-1008
Cow position: chr16:26672097-26672208 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr16:32326311-32326200 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr16:37925528-37925639 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1009
Cow position: chr16:43770704-43770816 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 898-994
Cow position: chr16:43562949-43563045 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 899-1008
Cow position: chr16:19887466-19887357 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.