Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006F06.5 |
| Conread position: | 887-988 |
| Cow position: | chr17:2078663-2078561 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 887-1008 |
| Cow position: | chr17:16118438-16118557 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 892-983 |
| Cow position: | chr17:27978123-27978032 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-992 |
| Cow position: | chr17:14899734-14899635 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:731479-731579 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:4063352-4063250 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:5638877-5638979 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:5672505-5672607 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:6071547-6071445 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:6262868-6262766 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:8222717-8222615 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:11785896-11785794 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:14029333-14029435 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:14240081-14239979 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:15328293-15328191 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:15438805-15438703 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:15853746-15853640 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:16855085-16855185 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:18100062-18100164 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:18123923-18124025 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:21770692-21770590 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:22106623-22106725 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:23053145-23053043 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:24026971-24027073 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:24785202-24785100 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:40810763-40810661 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:43231156-43231258 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr17:44641458-44641560 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-995 |
| Cow position: | chr17:147934-147830 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr17:452864-452749 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr17:1706432-1706317 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr17:1708718-1708833 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr17:1711886-1712001 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr17:16870255-16870370 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1008 |
| Cow position: | chr17:23338037-23338155 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 893-994 |
| Cow position: | chr17:18721867-18721968 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 893-995 |
| Cow position: | chr17:15229022-15229123 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 893-1008 |
| Cow position: | chr17:1569203-1569320 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 894-994 |
| Cow position: | chr17:1311752-1311852 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 894-994 |
| Cow position: | chr17:14242839-14242740 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 894-994 |
| Cow position: | chr17:21766907-21766807 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 896-1008 |
| Cow position: | chr17:29079387-29079277 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 897-992 |
| Cow position: | chr17:13930905-13930810 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-994 |
| Cow position: | chr17:30440-30343 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-994 |
| Cow position: | chr17:18200745-18200648 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-994 |
| Cow position: | chr17:29824954-29825051 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-994 |
| Cow position: | chr17:29950221-29950125 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 897-1008 |
| Cow position: | chr17:4210936-4210825 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-1008 |
| Cow position: | chr17:20215098-20214987 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 898-993 |
| Cow position: | chr17:16464089-16463994 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.