Cow genome map

Conread name: Ss1.1-Pig4-TMW8006F06.5

Conread position: 446-807
Cow position: chr22:8872581-8872221 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 568-808
Cow position: chr22:44356176-44356425 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 16

Conread position: 580-882
Cow position: chr22:294625-294899 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 296, 80

Conread position: 586-875
Cow position: chr22:36582469-36582733 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 662-800
Cow position: chr22:45107911-45108047 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 886-1005
Cow position: chr22:36541127-36541250 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 887-994
Cow position: chr22:18808083-18808190 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 887-994
Cow position: chr22:18811764-18811871 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 887-1008
Cow position: chr22:6202317-6202440 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 888-1008
Cow position: chr22:13696776-13696896 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 891-994
Cow position: chr22:6339796-6339693 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-987
Cow position: chr22:36784855-36784761 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 892-992
Cow position: chr22:10907064-10907164 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-993
Cow position: chr22:8339558-8339457 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:518237-518338 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 892-994
Cow position: chr22:1517901-1518001 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 892-994
Cow position: chr22:3275216-3275318 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:3433822-3433924 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:3806764-3806662 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 44

Conread position: 892-994
Cow position: chr22:4290667-4290769 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:5315383-5315278 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 892-994
Cow position: chr22:5452793-5452691 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:9269340-9269240 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 892-994
Cow position: chr22:9728832-9728934 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:12225755-12225857 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:15308822-15308924 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:15868494-15868393 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 892-994
Cow position: chr22:17325355-17325457 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 61

Conread position: 892-994
Cow position: chr22:18603670-18603772 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:19140564-19140665 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 892-994
Cow position: chr22:19600660-19600762 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:19822332-19822230 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:22107184-22107082 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:22607299-22607197 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:23868114-23868012 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:28785260-28785159 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 892-994
Cow position: chr22:29397225-29397123 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:31315684-31315583 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 892-994
Cow position: chr22:31331731-31331833 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:32209752-32209646 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 892-994
Cow position: chr22:33951811-33951911 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 892-994
Cow position: chr22:34171591-34171489 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:36785513-36785615 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:36858395-36858497 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:37290701-37290803 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:39465400-39465502 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:42500221-42500323 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:42994314-42994212 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:44381317-44381419 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:44461505-44461407 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 892-994
Cow position: chr22:46568948-46569050 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr22:46581754-46581856 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr22:43235978-43235875 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr22:697072-696957 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr22:13209522-13209408 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 892-1007
Cow position: chr22:25336292-25336177 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 63

Conread position: 892-1011
Cow position: chr22:2040468-2040349 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1012
Cow position: chr22:44925185-44925306 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 893-994
Cow position: chr22:557562-557663 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 893-994
Cow position: chr22:12728521-12728622 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 893-994
Cow position: chr22:46587136-46587035 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1004
Cow position: chr22:31645230-31645119 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1007
Cow position: chr22:11036628-11036514 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr22:1310783-1310898 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1008
Cow position: chr22:13775639-13775523 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 893-1008
Cow position: chr22:18191648-18191532 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 894-994
Cow position: chr22:21592562-21592462 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 894-994
Cow position: chr22:26105000-26105100 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 894-1008
Cow position: chr22:34931940-34932054 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 895-994
Cow position: chr22:24817623-24817723 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 895-1008
Cow position: chr22:46440179-46440292 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 897-994
Cow position: chr22:36186756-36186660 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 897-1003
Cow position: chr22:22862726-22862621 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 897-1008
Cow position: chr22:533229-533119 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 897-1008
Cow position: chr22:9371494-9371383 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 35

Conread position: 897-1008
Cow position: chr22:15497144-15497033 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr22:30918226-30918115 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr22:35904066-35904176 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 897-1008
Cow position: chr22:40589527-40589416 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1009
Cow position: chr22:46524808-46524696 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 898-1009
Cow position: chr22:5929718-5929828 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 898-1009
Cow position: chr22:12869320-12869433 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 898-1011
Cow position: chr22:11988571-11988684 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 903-994
Cow position: chr22:3011870-3011779 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 910-994
Cow position: chr22:28556817-28556733 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.