Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006F06.5 |
| Conread position: | 356-879 |
| Cow position: | chr28:10292024-10291526 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 886-994 |
| Cow position: | chr28:600994-601105 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 889-1008 |
| Cow position: | chr28:5770203-5770088 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 892-992 |
| Cow position: | chr28:1811784-1811883 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 892-992 |
| Cow position: | chr28:17391614-17391514 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:444589-444487 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:482527-482629 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:785848-785746 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:1164710-1164811 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:1214649-1214751 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:1508057-1507955 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:1956550-1956448 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:2644896-2644794 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:3188850-3188952 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:3627194-3627092 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:5111540-5111642 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:5211303-5211201 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:5748525-5748627 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:5940667-5940565 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:6046977-6046875 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:6478400-6478298 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:6535617-6535719 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:7005208-7005106 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:7744284-7744182 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:7888831-7888933 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:7907364-7907466 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:9182050-9181948 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:9288212-9288314 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:10772264-10772162 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:12650411-12650309 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:13463144-13463042 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:15032897-15032999 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:16181549-16181447 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:17663768-17663870 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:18516964-18517066 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:20935231-20935333 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:20967488-20967590 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:21768112-21768214 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:21896463-21896361 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:22255017-22255119 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:23310155-23310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:24886041-24885939 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:29036471-29036573 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:29823367-29823265 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:30098059-30097957 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:30533879-30533981 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:32786246-32786347 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:33255502-33255400 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:33639751-33639649 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:34583105-34583003 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:34597425-34597323 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-994 |
| Cow position: | chr28:34730913-34730811 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-995 |
| Cow position: | chr28:331719-331822 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-995 |
| Cow position: | chr28:2088755-2088652 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-995 |
| Cow position: | chr28:6959410-6959307 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1003 |
| Cow position: | chr28:14666327-14666215 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr28:1025153-1025269 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 892-1007 |
| Cow position: | chr28:24592053-24591938 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1008 |
| Cow position: | chr28:16543648-16543764 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 892-1008 |
| Cow position: | chr28:34649550-34649435 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 893-1006 |
| Cow position: | chr28:13522865-13522752 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 893-1008 |
| Cow position: | chr28:23839200-23839085 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 893-1008 |
| Cow position: | chr28:26923450-26923565 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 894-988 |
| Cow position: | chr28:5569543-5569451 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 894-994 |
| Cow position: | chr28:26419822-26419921 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 897-994 |
| Cow position: | chr28:7685760-7685857 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-1004 |
| Cow position: | chr28:1197303-1197196 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-1008 |
| Cow position: | chr28:5816820-5816709 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 897-1009 |
| Cow position: | chr28:5791335-5791445 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 898-994 |
| Cow position: | chr28:12155016-12154920 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 899-1008 |
| Cow position: | chr28:16041480-16041589 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 107 |
| Conread position: | 899-1009 |
| Cow position: | chr28:11502042-11502152 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-995 |
| Cow position: | chr28:6230522-6230614 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 910-1009 |
| Cow position: | chr28:12936247-12936346 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.