Cow genome map
Conread name: | Ss1.1-Pig4-TMW8006F06.5 |
Conread position: | 474-881 |
Cow position: | chr5:57977672-57978051 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 273 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 107, 95 |
Conread position: | 886-1008 |
Cow position: | chr5:34191904-34191779 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 887-994 |
Cow position: | chr5:30582312-30582204 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 887-1008 |
Cow position: | chr5:14905072-14905196 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 890-1008 |
Cow position: | chr5:28016022-28015905 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 892-981 |
Cow position: | chr5:47342845-47342756 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 77 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr5:10921816-10921716 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 87 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr5:14636607-14636707 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 89 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr5:20108056-20108156 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 84 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr5:24298984-24298884 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 91 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr5:55631035-55630935 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 87 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-993 |
Cow position: | chr5:710180-710281 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 83 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:1338950-1339053 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 88 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 892-994 |
Cow position: | chr5:2917435-2917333 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 92 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:3501157-3501259 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 92 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:4963409-4963511 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:5859937-5859835 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:6151861-6151963 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 95 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:7276803-7276702 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 892-994 |
Cow position: | chr5:7396219-7396118 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 892-994 |
Cow position: | chr5:10853859-10853961 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 89 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:12921369-12921267 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 89 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:19978943-19979045 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:21189192-21189090 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:23957355-23957457 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:24101621-24101519 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:25912704-25912602 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:29256240-29256342 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:29742586-29742688 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:32954298-32954196 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:34683389-34683491 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:36370021-36370123 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:37380058-37379956 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:37609971-37610073 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:37735347-37735245 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:41066996-41066894 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:44482575-44482473 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:44709411-44709513 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:46676584-46676482 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:46735305-46735407 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:46779487-46779385 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:47560590-47560692 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:48805480-48805581 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 892-994 |
Cow position: | chr5:49117380-49117483 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 88 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 892-994 |
Cow position: | chr5:49521681-49521579 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 95 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:54786137-54786239 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:58243825-58243927 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:64779036-64779138 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr5:73485928-73486030 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr5:412739-412841 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 89 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 892-995 |
Cow position: | chr5:3789199-3789096 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 93 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr5:9235434-9235537 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr5:15761398-15761501 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr5:54927948-54928051 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr5:54930276-54930379 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1007 |
Cow position: | chr5:11632014-11632129 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1007 |
Cow position: | chr5:46667045-46666930 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1007 |
Cow position: | chr5:57928375-57928490 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 90 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1008 |
Cow position: | chr5:7141140-7141255 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 892-1008 |
Cow position: | chr5:12679611-12679727 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1008 |
Cow position: | chr5:63312546-63312662 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1009 |
Cow position: | chr5:16127015-16126898 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1011 |
Cow position: | chr5:30844800-30844681 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 92 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1011 |
Cow position: | chr5:39936057-39935938 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-992 |
Cow position: | chr5:6840251-6840350 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 84 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-994 |
Cow position: | chr5:10066580-10066681 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-994 |
Cow position: | chr5:58004206-58004106 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 893-1004 |
Cow position: | chr5:41411468-41411579 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1007 |
Cow position: | chr5:2699203-2699317 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 894-994 |
Cow position: | chr5:32755475-32755575 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 90 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 894-995 |
Cow position: | chr5:58770901-58771001 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 90 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 895-1008 |
Cow position: | chr5:35446647-35446760 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 896-1007 |
Cow position: | chr5:15454744-15454633 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-994 |
Cow position: | chr5:41229081-41229178 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 86 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-994 |
Cow position: | chr5:52829812-52829911 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 897-1007 |
Cow position: | chr5:54125066-54124957 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:6031950-6031839 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:6986519-6986630 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 94 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:17027044-17026933 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:41952108-41952219 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:47872140-47872251 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:48055812-48055698 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 897-1008 |
Cow position: | chr5:67654293-67654183 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 897-1009 |
Cow position: | chr5:34526364-34526251 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 76, 55 |
Conread position: | 897-1009 |
Cow position: | chr5:49565543-49565432 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 897-1011 |
Cow position: | chr5:46796655-46796543 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 905-1011 |
Cow position: | chr5:48574856-48574962 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 86 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 906-994 |
Cow position: | chr5:8178065-8177977 (view UCSC Genome Browser custom track) |
Alignm length: | 89 |
Alignm identity: | 79 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.