Cow genome map

Conread name: Ss1.1-Pig4-TMW8006F06.5

Conread position: 474-881
Cow position: chr5:57977672-57978051 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 95

Conread position: 886-1008
Cow position: chr5:34191904-34191779 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 887-994
Cow position: chr5:30582312-30582204 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 887-1008
Cow position: chr5:14905072-14905196 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 890-1008
Cow position: chr5:28016022-28015905 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 892-981
Cow position: chr5:47342845-47342756 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-992
Cow position: chr5:10921816-10921716 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-992
Cow position: chr5:14636607-14636707 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-992
Cow position: chr5:20108056-20108156 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-992
Cow position: chr5:24298984-24298884 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-992
Cow position: chr5:55631035-55630935 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-993
Cow position: chr5:710180-710281 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:1338950-1339053 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 892-994
Cow position: chr5:2917435-2917333 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:3501157-3501259 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:4963409-4963511 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:5859937-5859835 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:6151861-6151963 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 95
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:7276803-7276702 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 892-994
Cow position: chr5:7396219-7396118 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 892-994
Cow position: chr5:10853859-10853961 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:12921369-12921267 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:19978943-19979045 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:21189192-21189090 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:23957355-23957457 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:24101621-24101519 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:25912704-25912602 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:29256240-29256342 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:29742586-29742688 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:32954298-32954196 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:34683389-34683491 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:36370021-36370123 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:37380058-37379956 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:37609971-37610073 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:37735347-37735245 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:41066996-41066894 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:44482575-44482473 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:44709411-44709513 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:46676584-46676482 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:46735305-46735407 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:46779487-46779385 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:47560590-47560692 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:48805480-48805581 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 892-994
Cow position: chr5:49117380-49117483 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 892-994
Cow position: chr5:49521681-49521579 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 95
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:54786137-54786239 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:58243825-58243927 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:64779036-64779138 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-994
Cow position: chr5:73485928-73486030 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr5:412739-412841 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 892-995
Cow position: chr5:3789199-3789096 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 93
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr5:9235434-9235537 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr5:15761398-15761501 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr5:54927948-54928051 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-995
Cow position: chr5:54930276-54930379 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr5:11632014-11632129 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr5:46667045-46666930 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1007
Cow position: chr5:57928375-57928490 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr5:7141140-7141255 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 892-1008
Cow position: chr5:12679611-12679727 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1008
Cow position: chr5:63312546-63312662 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1009
Cow position: chr5:16127015-16126898 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1011
Cow position: chr5:30844800-30844681 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 892-1011
Cow position: chr5:39936057-39935938 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 893-992
Cow position: chr5:6840251-6840350 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 893-994
Cow position: chr5:10066580-10066681 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 893-994
Cow position: chr5:58004206-58004106 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 893-1004
Cow position: chr5:41411468-41411579 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 893-1007
Cow position: chr5:2699203-2699317 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 894-994
Cow position: chr5:32755475-32755575 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 894-995
Cow position: chr5:58770901-58771001 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 895-1008
Cow position: chr5:35446647-35446760 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 896-1007
Cow position: chr5:15454744-15454633 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 897-994
Cow position: chr5:41229081-41229178 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 897-994
Cow position: chr5:52829812-52829911 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 897-1007
Cow position: chr5:54125066-54124957 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 897-1008
Cow position: chr5:6031950-6031839 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr5:6986519-6986630 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr5:17027044-17026933 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr5:41952108-41952219 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr5:47872140-47872251 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 897-1008
Cow position: chr5:48055812-48055698 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 897-1008
Cow position: chr5:67654293-67654183 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 897-1009
Cow position: chr5:34526364-34526251 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 55

Conread position: 897-1009
Cow position: chr5:49565543-49565432 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 897-1011
Cow position: chr5:46796655-46796543 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 905-1011
Cow position: chr5:48574856-48574962 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 906-994
Cow position: chr5:8178065-8177977 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.