Cow genome map
Conread name: | Ss1.1-Pig4-TMW8006F06.5 |
Conread position: | 551-875 |
Cow position: | chr9:1979370-1979066 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 221 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 30, 24 |
Conread position: | 850-1009 |
Cow position: | chr9:26081238-26081394 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 39, 14 |
Conread position: | 886-994 |
Cow position: | chr9:2173580-2173472 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 887-994 |
Cow position: | chr9:42868825-42868932 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-983 |
Cow position: | chr9:5007012-5006921 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 78 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-991 |
Cow position: | chr9:17302934-17303033 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 90 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr9:2495702-2495802 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 85 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-992 |
Cow position: | chr9:31810616-31810516 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 87 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-993 |
Cow position: | chr9:10939763-10939662 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 88 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-993 |
Cow position: | chr9:34059594-34059695 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 91 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:1991513-1991613 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 892-994 |
Cow position: | chr9:3545866-3545764 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 89 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:5627858-5627756 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:7005780-7005678 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 92 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:7059011-7059113 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:9016113-9016011 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:9021566-9021668 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:10567326-10567429 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 892-994 |
Cow position: | chr9:10857059-10856957 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:12260325-12260427 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:12285668-12285770 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:16178626-16178524 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:17017793-17017691 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:18539702-18539600 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:19156253-19156356 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 90 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 892-994 |
Cow position: | chr9:21412351-21412249 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:22655850-22655749 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 892-994 |
Cow position: | chr9:24918249-24918351 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 89 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:28024858-28024756 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:28658010-28658112 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:28785383-28785279 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 88 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 892-994 |
Cow position: | chr9:30675114-30675012 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 89 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:30737713-30737610 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 892-994 |
Cow position: | chr9:31124115-31124013 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:32972406-32972304 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:37158571-37158673 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 93 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:38633819-38633717 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 92 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:41313002-41313104 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:42570253-42570153 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 892-994 |
Cow position: | chr9:44203041-44203143 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:47005781-47005679 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:47044986-47044884 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:47171091-47170989 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:50003487-50003385 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:55031553-55031452 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 892-994 |
Cow position: | chr9:56176809-56176707 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:59479809-59479911 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 91 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-994 |
Cow position: | chr9:64012190-64012292 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr9:2856883-2856780 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr9:18506785-18506888 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 89 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-995 |
Cow position: | chr9:43225662-43225765 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 892-1008 |
Cow position: | chr9:5525276-5525395 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 892-1008 |
Cow position: | chr9:22319377-22319491 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 892-1008 |
Cow position: | chr9:62669516-62669631 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 893-992 |
Cow position: | chr9:29193530-29193629 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 82 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-994 |
Cow position: | chr9:6252606-6252505 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 88 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-994 |
Cow position: | chr9:6764734-6764835 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 90 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-994 |
Cow position: | chr9:20941510-20941411 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 86 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 893-995 |
Cow position: | chr9:5328313-5328415 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1006 |
Cow position: | chr9:44518632-44518745 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1008 |
Cow position: | chr9:13180959-13180845 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 893-1008 |
Cow position: | chr9:18109739-18109624 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1008 |
Cow position: | chr9:30139570-30139685 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1009 |
Cow position: | chr9:1998257-1998373 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 893-1009 |
Cow position: | chr9:26575875-26575761 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 894-994 |
Cow position: | chr9:3756794-3756894 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 87 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 894-1008 |
Cow position: | chr9:23044497-23044386 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 894-1008 |
Cow position: | chr9:28774205-28774319 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 896-1008 |
Cow position: | chr9:13472528-13472638 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 896-1008 |
Cow position: | chr9:59196892-59196780 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-991 |
Cow position: | chr9:30401317-30401223 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 81 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-993 |
Cow position: | chr9:27038142-27038046 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 87 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1002 |
Cow position: | chr9:62443941-62444046 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 88 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1006 |
Cow position: | chr9:21461510-21461401 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 93 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 897-1009 |
Cow position: | chr9:26055080-26054968 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 899-994 |
Cow position: | chr9:10325976-10325882 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 82 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 900-1008 |
Cow position: | chr9:3388770-3388878 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 903-1008 |
Cow position: | chr9:11505008-11504903 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 85 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.