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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8006H03.3
        

               
Conread position:
               
128-487
               

               
Cow position:
               
chr15:24797963-24797616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
144-509
               

               
Cow position:
               
chr15:21832582-21832207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr15:11987556-11987190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 191
               

               
Conread position:
               
145-487
               

               
Cow position:
               
chr15:51427966-51427628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
145-509
               

               
Cow position:
               
chr15:23798670-23798306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
146-509
               

               
Cow position:
               
chr15:8006839-8007199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
146-509
               

               
Cow position:
               
chr15:20487341-20486995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
147-423
               

               
Cow position:
               
chr15:26158737-26158465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
147-507
               

               
Cow position:
               
chr15:5726192-5726540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
147-509
               

               
Cow position:
               
chr15:23180306-23180655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
149-470
               

               
Cow position:
               
chr15:29541739-29542059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
149-486
               

               
Cow position:
               
chr15:33693511-33693168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
149-509
               

               
Cow position:
               
chr15:30981815-30982142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr15:2931710-2931451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 182
               

               
Conread position:
               
150-499
               

               
Cow position:
               
chr15:19807857-19807510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
150-507
               

               
Cow position:
               
chr15:17196014-17196357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
150-507
               

               
Cow position:
               
chr15:18671585-18671237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
152-487
               

               
Cow position:
               
chr15:12785292-12785619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
152-509
               

               
Cow position:
               
chr15:795151-794799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
152-509
               

               
Cow position:
               
chr15:10231877-10231524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
256, 37
               

               
Conread position:
               
154-507
               

               
Cow position:
               
chr15:41125691-41125355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
155-509
               

               
Cow position:
               
chr15:38837612-38837964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr15:39474065-39473894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
157-393
               

               
Cow position:
               
chr15:44671469-44671231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr15:47844217-47843961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
157-507
               

               
Cow position:
               
chr15:20314352-20314704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
159-459
               

               
Cow position:
               
chr15:14987868-14988157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr15:8665734-8665404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
159-502
               

               
Cow position:
               
chr15:32324335-32323996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
160-349
               

               
Cow position:
               
chr15:48818927-48819105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
160-509
               

               
Cow position:
               
chr15:43914226-43913870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 138
               

               
Conread position:
               
162-321
               

               
Cow position:
               
chr15:41049582-41049424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:16261205-16261531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:20422891-20422561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
263, 40
               

               
Conread position:
               
163-430
               

               
Cow position:
               
chr15:47773605-47773351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
189, 84
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr15:40798541-40798211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
164-509
               

               
Cow position:
               
chr15:33642971-33643307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
164-547
               

               
Cow position:
               
chr15:29027005-29026628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
165-470
               

               
Cow position:
               
chr15:50552655-50552350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
166-305
               

               
Cow position:
               
chr15:13513412-13513554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
166-345
               

               
Cow position:
               
chr15:27975994-27975815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr15:41475948-41475745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
166-447
               

               
Cow position:
               
chr15:13395425-13395706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
166-467
               

               
Cow position:
               
chr15:19942477-19942775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
166-480
               

               
Cow position:
               
chr15:52316940-52317246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
166-481
               

               
Cow position:
               
chr15:6233142-6232826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr15:21366310-21366007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
166-484
               

               
Cow position:
               
chr15:38652723-38652407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr15:47990886-47990553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
166-504
               

               
Cow position:
               
chr15:1857606-1857940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
166-504
               

               
Cow position:
               
chr15:39326620-39326299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr15:20391397-20391061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:10088199-10088537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:10246115-10245788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:17233066-17233411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:20081654-20081974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:22532130-22532455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 161
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:30471099-30470752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr15:43827892-43827556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
166-510
               

               
Cow position:
               
chr15:44377150-44377494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
166-521
               

               
Cow position:
               
chr15:30047674-30047315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
166-521
               

               
Cow position:
               
chr15:51307788-51307452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 13
               

               
Conread position:
               
166-526
               

               
Cow position:
               
chr15:35839217-35838853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
166-747
               

               
Cow position:
               
chr15:24616447-24617053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
167-321
               

               
Cow position:
               
chr15:20566798-20566953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
168-307
               

               
Cow position:
               
chr15:17471809-17471948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
168-316
               

               
Cow position:
               
chr15:47920265-47920117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
168-509
               

               
Cow position:
               
chr15:31857470-31857806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr15:22938884-22938552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
170-406
               

               
Cow position:
               
chr15:26851340-26851109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
170-486
               

               
Cow position:
               
chr15:40379093-40379406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
171-360
               

               
Cow position:
               
chr15:8331317-8331131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
171-463
               

               
Cow position:
               
chr15:13432367-13432665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
171-470
               

               
Cow position:
               
chr15:23572804-23572506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
171-487
               

               
Cow position:
               
chr15:6905424-6905730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
171-513
               

               
Cow position:
               
chr15:24967686-24968009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr15:2378329-2378468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr15:14969404-14969576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
172-449
               

               
Cow position:
               
chr15:32234426-32234173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
172-474
               

               
Cow position:
               
chr15:30316674-30316382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
269, 19
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr15:43674062-43673742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr15:7456601-7456913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr15:22939440-22939109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 155
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr15:36435088-36435422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr15:23275415-23275752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
172-516
               

               
Cow position:
               
chr15:16657352-16657717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 253
               

               
Conread position:
               
173-304
               

               
Cow position:
               
chr15:11635304-11635433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
173-321
               

               
Cow position:
               
chr15:26380860-26380706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
173-346
               

               
Cow position:
               
chr15:5710299-5710459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr15:40000813-40000979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
173-407
               

               
Cow position:
               
chr15:31495331-31495106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
173-487
               

               
Cow position:
               
chr15:31929011-31928703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
173-504
               

               
Cow position:
               
chr15:19771022-19771346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr15:662577-662251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr15:6227289-6226972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr15:11658696-11658351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr15:25667338-25667005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr15:34139876-34140195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
173-536
               

               
Cow position:
               
chr15:20534566-20534208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
173-546
               

               
Cow position:
               
chr15:14505325-14505677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
173-547
               

               
Cow position:
               
chr15:8427899-8428267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
174-367
               

               
Cow position:
               
chr15:44089277-44089087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
174-472
               

               
Cow position:
               
chr15:36846299-36845993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
174-484
               

               
Cow position:
               
chr15:38935292-38935600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr15:2968222-2968554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr15:26896811-26896497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
175-297
               

               
Cow position:
               
chr15:141167-141045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
175-313
               

               
Cow position:
               
chr15:49959426-49959561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
175-321
               

               
Cow position:
               
chr15:10199219-10199368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
175-322
               

               
Cow position:
               
chr15:17371429-17371579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr15:22444100-22443886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
175-393
               

               
Cow position:
               
chr15:19002394-19002172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
175-402
               

               
Cow position:
               
chr15:9879491-9879264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
175-470
               

               
Cow position:
               
chr15:36391558-36391853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr15:20370565-20370239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr15:21941961-21941629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr15:23697015-23696693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
176-290
               

               
Cow position:
               
chr15:23085263-23085375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-299
               

               
Cow position:
               
chr15:16492344-16492471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
176-306
               

               
Cow position:
               
chr15:51558294-51558425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
176-310
               

               
Cow position:
               
chr15:1500720-1500855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
176-310
               

               
Cow position:
               
chr15:1508246-1508381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
176-315
               

               
Cow position:
               
chr15:9128777-9128639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr15:27656991-27657142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr15:49230423-49230279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr15:53006045-53005901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
176-346
               

               
Cow position:
               
chr15:840257-840091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
176-347
               

               
Cow position:
               
chr15:26849642-26849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr15:13846675-13846509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr15:28099001-28099196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
176-375
               

               
Cow position:
               
chr15:41534542-41534736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
176-399
               

               
Cow position:
               
chr15:26529786-26530000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr15:11909057-11908840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
176-404
               

               
Cow position:
               
chr15:19554036-19553806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
176-409
               

               
Cow position:
               
chr15:15025055-15025287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
176-447
               

               
Cow position:
               
chr15:36952309-36952044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
176-447
               

               
Cow position:
               
chr15:38827425-38827169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
252, 13
               

               
Conread position:
               
176-448
               

               
Cow position:
               
chr15:49483514-49483784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 103
               

               
Conread position:
               
176-467
               

               
Cow position:
               
chr15:41528076-41527802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
176-470
               

               
Cow position:
               
chr15:29686452-29686731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
240, 9
               

               
Conread position:
               
176-471
               

               
Cow position:
               
chr15:43114830-43114542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr15:5409004-5408723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
176-484
               

               
Cow position:
               
chr15:4919180-4918874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
176-498
               

               
Cow position:
               
chr15:22930462-22930138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr15:17100814-17100493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr15:19402895-19403198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr15:36259707-36259386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr15:46563587-46563275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:286362-286696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:1502803-1503122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:1722951-1722633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:2380255-2380574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:4295650-4295982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:9648799-9648487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
246, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:11996138-11995808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:12304529-12304859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:12722974-12723305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:14870645-14870960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
230, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:17084096-17084426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:18017817-18018141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:22531563-22531874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:26919379-26919060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:28823922-28823601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:29810015-29810332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:30986396-30986068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
230, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:36773791-36773480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
273, 34
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:42142763-42143074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
313, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:43031136-43030807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:43626354-43626686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:44051591-44051284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
176-510
               

               
Cow position:
               
chr15:16112284-16112620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
176-516
               

               
Cow position:
               
chr15:44658256-44658581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
176-519
               

               
Cow position:
               
chr15:5717609-5717939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 16
               

               
Conread position:
               
176-545
               

               
Cow position:
               
chr15:50322501-50322844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr15:53716325-53716650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
178-504
               

               
Cow position:
               
chr15:16603721-16604035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr15:3700393-3700069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr15:4138024-4138351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
179-401
               

               
Cow position:
               
chr15:26442107-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
179-493
               

               
Cow position:
               
chr15:47042750-47042431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
179-509
               

               
Cow position:
               
chr15:5729849-5730158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
180-310
               

               
Cow position:
               
chr15:258438-258569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
181-485
               

               
Cow position:
               
chr15:9465567-9465871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
188-508
               

               
Cow position:
               
chr15:14576230-14576551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
189-320
               

               
Cow position:
               
chr15:18941935-18942067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
189-321
               

               
Cow position:
               
chr15:40844720-40844582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
189-346
               

               
Cow position:
               
chr15:18704032-18703878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
189-358
               

               
Cow position:
               
chr15:12913598-12913429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
189-367
               

               
Cow position:
               
chr15:16230130-16230300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
189-374
               

               
Cow position:
               
chr15:43715231-43715412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
189-376
               

               
Cow position:
               
chr15:36422519-36422699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
189-380
               

               
Cow position:
               
chr15:34223768-34223957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr15:50332876-50333090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 144
               

               
Conread position:
               
189-407
               

               
Cow position:
               
chr15:49131960-49132176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
189-415
               

               
Cow position:
               
chr15:21903506-21903285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
189-420
               

               
Cow position:
               
chr15:6037545-6037326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
189-428
               

               
Cow position:
               
chr15:40835016-40835251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
189-430
               

               
Cow position:
               
chr15:36388200-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
189-443
               

               
Cow position:
               
chr15:20047503-20047722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
189-445
               

               
Cow position:
               
chr15:49784380-49784131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr15:3695538-3695790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
189-469
               

               
Cow position:
               
chr15:25349875-25350143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
189-470
               

               
Cow position:
               
chr15:39286510-39286234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
189-472
               

               
Cow position:
               
chr15:16476850-16476556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
189-478
               

               
Cow position:
               
chr15:10442610-10442316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 149
               

               
Conread position:
               
189-482
               

               
Cow position:
               
chr15:31042783-31043058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
189-487
               

               
Cow position:
               
chr15:37381530-37381817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
189-488
               

               
Cow position:
               
chr15:19950387-19950670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
212, 36
               

               
Conread position:
               
189-498
               

               
Cow position:
               
chr15:5158272-5158581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
189-499
               

               
Cow position:
               
chr15:35425891-35425606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
189-506
               

               
Cow position:
               
chr15:22553640-22553328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr15:21822026-21821709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr15:33178525-33178209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
189-508
               

               
Cow position:
               
chr15:608044-608363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
189-508
               

               
Cow position:
               
chr15:34896662-34896979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
189-508
               

               
Cow position:
               
chr15:47821734-47822025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:225902-225588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:1330208-1329885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:4179038-4178719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
230, 133
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:4418501-4418183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:5535678-5535975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:11011692-11011387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:16543537-16543240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:16667597-16667285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 68
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:16822851-16823155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 15
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:20459410-20459082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 141
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:20472643-20472331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:21420848-21421161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:24994610-24994303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:25208858-25208551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:30001597-30001903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:35641913-35642238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:36887740-36888041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:39405643-39405949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:39598146-39598460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:45584623-45584939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 171
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr15:49922036-49922358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
189-514
               

               
Cow position:
               
chr15:21893681-21894003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
189-517
               

               
Cow position:
               
chr15:20390809-20390475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
189-547
               

               
Cow position:
               
chr15:31137564-31137212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
189-550
               

               
Cow position:
               
chr15:49273863-49274209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
189-561
               

               
Cow position:
               
chr15:85345-84982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
189-575
               

               
Cow position:
               
chr15:26079445-26079083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
190-297
               

               
Cow position:
               
chr15:48014940-48015047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-377
               

               
Cow position:
               
chr15:12059486-12059657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr15:13669946-13669759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr15:10049412-10049198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
190-463
               

               
Cow position:
               
chr15:21803763-21803489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
190-479
               

               
Cow position:
               
chr15:5719903-5719621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
190-484
               

               
Cow position:
               
chr15:25906820-25907110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
190-504
               

               
Cow position:
               
chr15:5420980-5420672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
190-506
               

               
Cow position:
               
chr15:17337274-17337573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr15:915949-915630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr15:33306022-33306325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 28
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr15:40957480-40957793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr15:4485050-4485359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr15:8579235-8578908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr15:27900603-27900291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
308, 133
               

               
Conread position:
               
190-518
               

               
Cow position:
               
chr15:1297648-1297964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
304, 15
               

               
Conread position:
               
191-321
               

               
Cow position:
               
chr15:5691005-5691139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
191-370
               

               
Cow position:
               
chr15:14964257-14964086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
191-372
               

               
Cow position:
               
chr15:4735723-4735554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr15:27063614-27063405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
191-459
               

               
Cow position:
               
chr15:41056306-41056037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
191-504
               

               
Cow position:
               
chr15:53037059-53036755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
191-506
               

               
Cow position:
               
chr15:6969890-6970197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
191-509
               

               
Cow position:
               
chr15:27973303-27972997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
298, 61
               

               
Conread position:
               
192-310
               

               
Cow position:
               
chr15:14572584-14572701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
192-354
               

               
Cow position:
               
chr15:46284012-46283852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr15:10880977-10880768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
192-418
               

               
Cow position:
               
chr15:921656-921876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr15:244686-244940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
192-464
               

               
Cow position:
               
chr15:20723078-20722816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
192-481
               

               
Cow position:
               
chr15:14888733-14888451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 66
               

               
Conread position:
               
192-509
               

               
Cow position:
               
chr15:8353945-8354261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
192-510
               

               
Cow position:
               
chr15:9622084-9622408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr15:38820607-38820803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
195-509
               

               
Cow position:
               
chr15:52482922-52482612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
195-509
               

               
Cow position:
               
chr15:53163927-53164237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
199-376
               

               
Cow position:
               
chr15:48326316-48326144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
199-482
               

               
Cow position:
               
chr15:21583016-21582732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:1804422-1804114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:5235080-5234786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
294, 25
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:17762819-17763125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:24982268-24981975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:26903104-26903414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:36353580-36353886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr15:36621311-36621635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
199-512
               

               
Cow position:
               
chr15:38883053-38883372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
199-520
               

               
Cow position:
               
chr15:34284499-34284184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr15:7956165-7955968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
201-476
               

               
Cow position:
               
chr15:49950577-49950842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
192, 48
               

               
Conread position:
               
201-509
               

               
Cow position:
               
chr15:2953220-2952911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
201-509
               

               
Cow position:
               
chr15:38806592-38806281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
202-321
               

               
Cow position:
               
chr15:53503740-53503858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr15:40015091-40014834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
203-349
               

               
Cow position:
               
chr15:33897741-33897884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
203-410
               

               
Cow position:
               
chr15:864095-864298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
203-487
               

               
Cow position:
               
chr15:11559440-11559160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
203-508
               

               
Cow position:
               
chr15:11560603-11560295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
203-509
               

               
Cow position:
               
chr15:25585177-25584875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
203-509
               

               
Cow position:
               
chr15:33284791-33285099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
204-510
               

               
Cow position:
               
chr15:7308242-7307934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
206-509
               

               
Cow position:
               
chr15:28924840-28924545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
207-509
               

               
Cow position:
               
chr15:21907862-21908153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
208-321
               

               
Cow position:
               
chr15:848564-848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr15:4694667-4694901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
208-465
               

               
Cow position:
               
chr15:28038708-28038949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr15:16928173-16927887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
209-509
               

               
Cow position:
               
chr15:1083452-1083158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
209-509
               

               
Cow position:
               
chr15:26912152-26911861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
210-447
               

               
Cow position:
               
chr15:52809645-52809427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr15:32226944-32226701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
187, 47
               

               
Conread position:
               
212-487
               

               
Cow position:
               
chr15:36793573-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
216-453
               

               
Cow position:
               
chr15:12203474-12203712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
216-474
               

               
Cow position:
               
chr15:32977910-32977663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
217-407
               

               
Cow position:
               
chr15:11912622-11912441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr15:9106970-9107254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
282, 39
               

               
Conread position:
               
230-541
               

               
Cow position:
               
chr15:5929844-5930146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
232-392
               

               
Cow position:
               
chr15:22787782-22787939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr15:37204996-37205262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
237-509
               

               
Cow position:
               
chr15:16307376-16307630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
238-374
               

               
Cow position:
               
chr15:24953566-24953438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr15:50660578-50660782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
239-509
               

               
Cow position:
               
chr15:275610-275861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr15:17353692-17353430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr15:19186656-19186401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
228, 83
               

               
Conread position:
               
242-436
               

               
Cow position:
               
chr15:31024952-31025136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
242-449
               

               
Cow position:
               
chr15:14281504-14281708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
243-396
               

               
Cow position:
               
chr15:18776791-18776644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
244-378
               

               
Cow position:
               
chr15:15992681-15992554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
244-407
               

               
Cow position:
               
chr15:27016286-27016132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-443
               

               
Cow position:
               
chr15:25650449-25650269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-447
               

               
Cow position:
               
chr15:44280063-44280256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
244-487
               

               
Cow position:
               
chr15:23780106-23779876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
244-498
               

               
Cow position:
               
chr15:5683111-5683347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
244-506
               

               
Cow position:
               
chr15:21820950-21821203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
244-507
               

               
Cow position:
               
chr15:29604739-29604500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:10335715-10335974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:12655954-12655697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:13554315-13554572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
239, 20
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:16583729-16583488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:39621299-39621562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
230, 79
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:42789187-42788933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 78
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr15:49257825-49258080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
244-512
               

               
Cow position:
               
chr15:26573341-26573599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
245, 36
               

               
Conread position:
               
244-512
               

               
Cow position:
               
chr15:50302143-50302403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
244-516
               

               
Cow position:
               
chr15:39316881-39316611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
165, 78
               

               
Conread position:
               
244-536
               

               
Cow position:
               
chr15:2141342-2141058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
244-543
               

               
Cow position:
               
chr15:22871575-22871855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
245, 62
               

               
Conread position:
               
244-548
               

               
Cow position:
               
chr15:10608342-10608052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
245-398
               

               
Cow position:
               
chr15:2389656-2389806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
245-453
               

               
Cow position:
               
chr15:26718958-26718759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
175, 77
               

               
Conread position:
               
245-457
               

               
Cow position:
               
chr15:14176537-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
245-469
               

               
Cow position:
               
chr15:31175755-31175978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
245-505
               

               
Cow position:
               
chr15:10457051-10456799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
245-506
               

               
Cow position:
               
chr15:25386401-25386657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
246-396
               

               
Cow position:
               
chr15:39520131-39520275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-447
               

               
Cow position:
               
chr15:6272924-6272732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr15:10563542-10563316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr15:51898189-51898448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
247-410
               

               
Cow position:
               
chr15:23719519-23719364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
247-442
               

               
Cow position:
               
chr15:40594543-40594351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
247-453
               

               
Cow position:
               
chr15:5657798-5658001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr15:6530884-6530631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr15:33976731-33976471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
247-580
               

               
Cow position:
               
chr15:29330970-29331295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 75
               

               
Conread position:
               
249-393
               

               
Cow position:
               
chr15:18587704-18587571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
249-410
               

               
Cow position:
               
chr15:14261291-14261138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
249-454
               

               
Cow position:
               
chr15:9497534-9497337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
249-481
               

               
Cow position:
               
chr15:35441112-35440886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
249-487
               

               
Cow position:
               
chr15:35945496-35945723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
249-499
               

               
Cow position:
               
chr15:35205186-35204942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr15:36782363-36782110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr15:39599412-39599659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
250-455
               

               
Cow position:
               
chr15:30794947-30795147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
150, 72
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr15:41087934-41087707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
250-484
               

               
Cow position:
               
chr15:12615-12843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
250-487
               

               
Cow position:
               
chr15:21166457-21166221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
250-487
               

               
Cow position:
               
chr15:48711087-48710858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
250-507
               

               
Cow position:
               
chr15:52611270-52611525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr15:12870896-12870646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
250, 71
               

               
Conread position:
               
252-453
               

               
Cow position:
               
chr15:78543-78735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
252-509
               

               
Cow position:
               
chr15:22136659-22136900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
230, 73
               

               
Conread position:
               
253-463
               

               
Cow position:
               
chr15:16908403-16908603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
254-506
               

               
Cow position:
               
chr15:41000098-40999854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
170, 10
               

               
Conread position:
               
254-543
               

               
Cow position:
               
chr15:21389192-21388919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
246, 13
               

               
Conread position:
               
255-447
               

               
Cow position:
               
chr15:22442306-22442117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr15:9781443-9781684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
256-487
               

               
Cow position:
               
chr15:41418856-41418636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr15:2145165-2144913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr15:34207214-34206971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr15:23598342-23598094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr15:46868740-46868494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
257-532
               

               
Cow position:
               
chr15:28258483-28258214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
259-443
               

               
Cow position:
               
chr15:39090273-39090444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
259-446
               

               
Cow position:
               
chr15:44237393-44237573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
259-452
               

               
Cow position:
               
chr15:37284429-37284616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
259-508
               

               
Cow position:
               
chr15:9971002-9970759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 64
               

               
Conread position:
               
260-541
               

               
Cow position:
               
chr15:45322763-45323035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
262-482
               

               
Cow position:
               
chr15:15573856-15573641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
262-484
               

               
Cow position:
               
chr15:10660576-10660359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
262-509
               

               
Cow position:
               
chr15:43599168-43599403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
264-509
               

               
Cow position:
               
chr15:6586751-6586499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
264-509
               

               
Cow position:
               
chr15:17870303-17870068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
265-439
               

               
Cow position:
               
chr15:34751074-34751233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
265-446
               

               
Cow position:
               
chr15:40415657-40415484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
265-508
               

               
Cow position:
               
chr15:29340043-29340280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
141, 63
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr15:41620208-41619969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr15:44640878-44641114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr15:20351815-20352047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
267-509
               

               
Cow position:
               
chr15:4093949-4093715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
268-484
               

               
Cow position:
               
chr15:47843266-47843056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr15:6905062-6905279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
269-509
               

               
Cow position:
               
chr15:13387063-13387297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
269-592
               

               
Cow position:
               
chr15:26404269-26404574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
269, 54
               

               
Conread position:
               
273-509
               

               
Cow position:
               
chr15:26117514-26117728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
275-507
               

               
Cow position:
               
chr15:24128023-24128241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
275-592
               

               
Cow position:
               
chr15:4534903-4535212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
277-480
               

               
Cow position:
               
chr15:35417631-35417439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
278-487
               

               
Cow position:
               
chr15:3726119-3726318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
278-509
               

               
Cow position:
               
chr15:16639772-16639998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
280-509
               

               
Cow position:
               
chr15:23568130-23567903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
173, 43
               

               
Conread position:
               
281-508
               

               
Cow position:
               
chr15:41360952-41360747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
291-509
               

               
Cow position:
               
chr15:13515374-13515586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
292-496
               

               
Cow position:
               
chr15:12359043-12359240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
295-508
               

               
Cow position:
               
chr15:23768245-23768046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
194, 28
               

               
Conread position:
               
297-571
               

               
Cow position:
               
chr15:23114848-23115119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
318-508
               

               
Cow position:
               
chr15:9871385-9871197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
324-509
               

               
Cow position:
               
chr15:23702814-23702992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr15:19119573-19119386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr15:15880966-15881149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr15:24045060-24044881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr15:38877264-38877089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr15:47280099-47279922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
335-509
               

               
Cow position:
               
chr15:53045833-53045661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
337-509
               

               
Cow position:
               
chr15:38103837-38103674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
341-508
               

               
Cow position:
               
chr15:24305430-24305265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
341-509
               

               
Cow position:
               
chr15:34104309-34104489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 167
               

               
Conread position:
               
346-508
               

               
Cow position:
               
chr15:23905877-23905716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
350-547
               

               
Cow position:
               
chr15:40009595-40009397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
356-509
               

               
Cow position:
               
chr15:11646425-11646270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
356-509
               

               
Cow position:
               
chr15:15708047-15707893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
364-512
               

               
Cow position:
               
chr15:36725103-36724959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
371-509
               

               
Cow position:
               
chr15:23487086-23486951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 42
               
Show alignments to all cow chromosomes.