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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8006H03.3
        

               
Conread position:
               
118-514
               

               
Cow position:
               
chr9:60395278-60394889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
131-509
               

               
Cow position:
               
chr9:31215864-31216246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
134-358
               

               
Cow position:
               
chr9:28315211-28315438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
139-488
               

               
Cow position:
               
chr9:34697508-34697169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
143-472
               

               
Cow position:
               
chr9:58132152-58131843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
143-508
               

               
Cow position:
               
chr9:43757340-43757694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
144-320
               

               
Cow position:
               
chr9:34355980-34355800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
144-323
               

               
Cow position:
               
chr9:58734060-58734238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
144-480
               

               
Cow position:
               
chr9:20466142-20465830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
273, 33
               

               
Conread position:
               
145-468
               

               
Cow position:
               
chr9:38941645-38941315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 192
               

               
Conread position:
               
145-476
               

               
Cow position:
               
chr9:50310963-50310649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
145-509
               

               
Cow position:
               
chr9:55321457-55321795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
248, 31
               

               
Conread position:
               
146-504
               

               
Cow position:
               
chr9:47500402-47500054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
337, 113
               

               
Conread position:
               
146-517
               

               
Cow position:
               
chr9:4263289-4262928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
147-321
               

               
Cow position:
               
chr9:35933012-35932836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr9:2397610-2397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
147-445
               

               
Cow position:
               
chr9:35832813-35832522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
147-509
               

               
Cow position:
               
chr9:10144684-10144318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
148-321
               

               
Cow position:
               
chr9:20828708-20828884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
149-499
               

               
Cow position:
               
chr9:15215892-15215541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 184
               

               
Conread position:
               
150-484
               

               
Cow position:
               
chr9:52513664-52513320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 271
               

               
Conread position:
               
150-498
               

               
Cow position:
               
chr9:52485108-52484774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr9:1729880-1729560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr9:20090865-20091199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
157-348
               

               
Cow position:
               
chr9:14519564-14519382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
160-431
               

               
Cow position:
               
chr9:37138856-37139125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
160-470
               

               
Cow position:
               
chr9:25583645-25583949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
161-316
               

               
Cow position:
               
chr9:45369369-45369219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr9:61301164-61300965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
161-366
               

               
Cow position:
               
chr9:17769136-17769334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr9:62631852-62631653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
162-396
               

               
Cow position:
               
chr9:27345774-27345537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
163-375
               

               
Cow position:
               
chr9:12773511-12773716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
163-382
               

               
Cow position:
               
chr9:43202154-43202367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr9:11098636-11098413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr9:23971078-23970838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr9:39709670-39709916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
163-489
               

               
Cow position:
               
chr9:44396476-44396797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
164-400
               

               
Cow position:
               
chr9:39135803-39135577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
165-281
               

               
Cow position:
               
chr9:35905178-35905062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
165-407
               

               
Cow position:
               
chr9:47214731-47214487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
165-425
               

               
Cow position:
               
chr9:47517016-47517271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
165-484
               

               
Cow position:
               
chr9:37934420-37934104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr9:13169846-13169507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr9:38792834-38793171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
166-288
               

               
Cow position:
               
chr9:61637254-61637372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
166-298
               

               
Cow position:
               
chr9:42608597-42608723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
166-299
               

               
Cow position:
               
chr9:48115090-48115218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
166-310
               

               
Cow position:
               
chr9:41363334-41363200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
166-317
               

               
Cow position:
               
chr9:53120824-53120967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
166-321
               

               
Cow position:
               
chr9:30194831-30194989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
166-321
               

               
Cow position:
               
chr9:34743178-34743023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
166-367
               

               
Cow position:
               
chr9:52257640-52257445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
166-370
               

               
Cow position:
               
chr9:34276394-34276189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr9:19718514-19718315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
166-404
               

               
Cow position:
               
chr9:4241224-4241461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr9:44759106-44758875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr9:12786656-12786415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr9:23956157-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr9:51717772-51717467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
166-468
               

               
Cow position:
               
chr9:41785040-41785337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
166-470
               

               
Cow position:
               
chr9:45728594-45728897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
166-472
               

               
Cow position:
               
chr9:53109070-53109373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr9:34902279-34901978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 165
               

               
Conread position:
               
166-484
               

               
Cow position:
               
chr9:7409597-7409910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
166-484
               

               
Cow position:
               
chr9:26085876-26086194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
166-487
               

               
Cow position:
               
chr9:20815686-20815998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
166-487
               

               
Cow position:
               
chr9:34410574-34410260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
166-497
               

               
Cow position:
               
chr9:42264040-42264354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr9:6839810-6840150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr9:6397966-6397629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
166-504
               

               
Cow position:
               
chr9:45285719-45285377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
166-507
               

               
Cow position:
               
chr9:25546476-25546792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr9:28452350-28452000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr9:32019510-32019173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr9:53762519-53762855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 23
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr9:55256731-55256393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
166-515
               

               
Cow position:
               
chr9:19555207-19555537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
166-521
               

               
Cow position:
               
chr9:32670126-32669778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
166-547
               

               
Cow position:
               
chr9:40303315-40302936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
166-548
               

               
Cow position:
               
chr9:31640506-31640128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
166-565
               

               
Cow position:
               
chr9:8936968-8937356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
167-319
               

               
Cow position:
               
chr9:61847294-61847148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
168-319
               

               
Cow position:
               
chr9:2037258-2037417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
168-367
               

               
Cow position:
               
chr9:40984325-40984523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
168-378
               

               
Cow position:
               
chr9:40603489-40603697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
168-386
               

               
Cow position:
               
chr9:33101283-33101077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
215, 21
               

               
Conread position:
               
168-466
               

               
Cow position:
               
chr9:9358638-9358927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
238, 36
               

               
Conread position:
               
168-481
               

               
Cow position:
               
chr9:1878181-1877878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
168-506
               

               
Cow position:
               
chr9:55117904-55118234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
168-509
               

               
Cow position:
               
chr9:8547631-8547973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
168-510
               

               
Cow position:
               
chr9:56453168-56453487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
168-547
               

               
Cow position:
               
chr9:53139313-53138938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
169-410
               

               
Cow position:
               
chr9:12337723-12337963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
170-321
               

               
Cow position:
               
chr9:41470277-41470120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
170-407
               

               
Cow position:
               
chr9:52519001-52518765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
170-460
               

               
Cow position:
               
chr9:52755028-52754748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
170-503
               

               
Cow position:
               
chr9:56032493-56032176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
170-506
               

               
Cow position:
               
chr9:39011643-39011322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
170-521
               

               
Cow position:
               
chr9:52267938-52267587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
171-322
               

               
Cow position:
               
chr9:51609104-51609254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
171-349
               

               
Cow position:
               
chr9:44625044-44625212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
171-350
               

               
Cow position:
               
chr9:11873470-11873303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
171-463
               

               
Cow position:
               
chr9:46981397-46981119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
171-484
               

               
Cow position:
               
chr9:51566673-51566362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
171-487
               

               
Cow position:
               
chr9:13744109-13743797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
171-498
               

               
Cow position:
               
chr9:8629087-8628776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr9:5357842-5357995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
172-490
               

               
Cow position:
               
chr9:40005303-40005614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr9:12910574-12910245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
173-301
               

               
Cow position:
               
chr9:6634757-6634633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
173-316
               

               
Cow position:
               
chr9:63712921-63713059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr9:34760539-34760364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
173-404
               

               
Cow position:
               
chr9:14738079-14738304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
173-421
               

               
Cow position:
               
chr9:57131324-57131565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
173-422
               

               
Cow position:
               
chr9:22466608-22466845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr9:6954426-6954148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
173-484
               

               
Cow position:
               
chr9:58614324-58614617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
173-487
               

               
Cow position:
               
chr9:11123653-11123347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
173-503
               

               
Cow position:
               
chr9:20901291-20900971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr9:61022446-61022766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:5456344-5456016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 8
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:8919831-8920156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:17872280-17871946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:21460326-21460000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:28772968-28773279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:32676504-32676840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:35028342-35028008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 156
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr9:44709660-44709983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
173-516
               

               
Cow position:
               
chr9:33597800-33598145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
174-321
               

               
Cow position:
               
chr9:22360700-22360842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
174-321
               

               
Cow position:
               
chr9:33248134-33247992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
174-359
               

               
Cow position:
               
chr9:34423446-34423632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr9:32877886-32878075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr9:7543429-7543235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
174-484
               

               
Cow position:
               
chr9:44822496-44822177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr9:20942792-20942451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
175-304
               

               
Cow position:
               
chr9:34399499-34399632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
175-321
               

               
Cow position:
               
chr9:9091281-9091127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
175-321
               

               
Cow position:
               
chr9:26493649-26493787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
175-324
               

               
Cow position:
               
chr9:64302803-64302650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
175-342
               

               
Cow position:
               
chr9:17719102-17719255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
175-346
               

               
Cow position:
               
chr9:44918449-44918283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
175-351
               

               
Cow position:
               
chr9:11380816-11380644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
175-366
               

               
Cow position:
               
chr9:35295522-35295707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
175-375
               

               
Cow position:
               
chr9:12129137-12129333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
175-402
               

               
Cow position:
               
chr9:53390377-53390132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr9:36627951-36628175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
175-432
               

               
Cow position:
               
chr9:63361882-63361635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 13
               

               
Conread position:
               
175-434
               

               
Cow position:
               
chr9:50382489-50382242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
175-438
               

               
Cow position:
               
chr9:59998201-59997946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
175-446
               

               
Cow position:
               
chr9:9686589-9686318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
175-448
               

               
Cow position:
               
chr9:13460579-13460322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
219, 14
               

               
Conread position:
               
175-453
               

               
Cow position:
               
chr9:58452241-58451978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
175-470
               

               
Cow position:
               
chr9:9311686-9311978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
175-470
               

               
Cow position:
               
chr9:20755932-20755637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
175-487
               

               
Cow position:
               
chr9:6189534-6189236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
175-487
               

               
Cow position:
               
chr9:21030131-21030444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
175-493
               

               
Cow position:
               
chr9:6951941-6952248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
183, 14
               

               
Conread position:
               
175-506
               

               
Cow position:
               
chr9:5263333-5263655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
175-506
               

               
Cow position:
               
chr9:50607101-50606794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:5227331-5227010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 14
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:8998180-8998514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:9516919-9516611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
192, 14
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:12280800-12281127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:26279344-26279019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:26477039-26477374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
80, 156
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:28747689-28747366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:45141767-45141445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr9:61302832-61303161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
175-543
               

               
Cow position:
               
chr9:62724371-62724728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
175-557
               

               
Cow position:
               
chr9:1370764-1371135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
176-289
               

               
Cow position:
               
chr9:43876126-43876010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
176-306
               

               
Cow position:
               
chr9:55577541-55577671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
176-309
               

               
Cow position:
               
chr9:21816361-21816497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
176-311
               

               
Cow position:
               
chr9:8066209-8066075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr9:5068667-5068818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr9:6237660-6237516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr9:9494989-9495134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr9:41653739-41653596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr9:57642343-57642484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr9:59586145-59586289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-324
               

               
Cow position:
               
chr9:388360-388212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr9:11447977-11447809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-350
               

               
Cow position:
               
chr9:23840575-23840393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr9:4257147-4256975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr9:32052106-32052293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr9:36401830-36401647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr9:43679949-43680144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
176-375
               

               
Cow position:
               
chr9:22804139-22803945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr9:19771190-19771393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr9:59897426-59897616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
176-379
               

               
Cow position:
               
chr9:58440553-58440341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr9:22447464-22447263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
176-390
               

               
Cow position:
               
chr9:3924285-3924484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
176-391
               

               
Cow position:
               
chr9:36457826-36458043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
176-403
               

               
Cow position:
               
chr9:22440643-22440428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
176-406
               

               
Cow position:
               
chr9:33151579-33151799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr9:5104580-5104345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr9:33347652-33347432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
176-408
               

               
Cow position:
               
chr9:48016819-48017040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
176-410
               

               
Cow position:
               
chr9:44584431-44584652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-421
               

               
Cow position:
               
chr9:52763923-52763688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
176-439
               

               
Cow position:
               
chr9:34024529-34024789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
176-444
               

               
Cow position:
               
chr9:8834301-8834037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
176-446
               

               
Cow position:
               
chr9:37198956-37199218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
176-447
               

               
Cow position:
               
chr9:17840849-17840579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
176-448
               

               
Cow position:
               
chr9:34279229-34278958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-452
               

               
Cow position:
               
chr9:9459819-9460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-467
               

               
Cow position:
               
chr9:40507763-40507489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
176-469
               

               
Cow position:
               
chr9:33584854-33584565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
176-481
               

               
Cow position:
               
chr9:15806096-15805795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-487
               

               
Cow position:
               
chr9:1867301-1867585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
176-495
               

               
Cow position:
               
chr9:8636508-8636812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 13
               

               
Conread position:
               
176-498
               

               
Cow position:
               
chr9:3185957-3186274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
176-503
               

               
Cow position:
               
chr9:22408585-22408897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
176-507
               

               
Cow position:
               
chr9:25556813-25557121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 13
               

               
Conread position:
               
176-507
               

               
Cow position:
               
chr9:33114169-33114501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:1751159-1751492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:3387546-3387849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
313, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:5433475-5433796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
238, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:5500694-5501015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:8901401-8901065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:9403341-9403018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:10118836-10118507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:11168575-11168888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:20579758-20579448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:24887035-24887357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:26345136-26344811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:27279136-27279467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:33219130-33218794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 161
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:51620274-51620595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:55795588-55795914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr9:58979234-58979555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
176-547
               

               
Cow position:
               
chr9:4341326-4340977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
176-549
               

               
Cow position:
               
chr9:48730258-48730631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
176-747
               

               
Cow position:
               
chr9:5327092-5327650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
177-321
               

               
Cow position:
               
chr9:1917813-1917957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
177-373
               

               
Cow position:
               
chr9:34917346-34917163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr9:29339483-29339197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
177-507
               

               
Cow position:
               
chr9:34286629-34286956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr9:11299842-11299533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr9:35128307-35128654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr9:41728091-41728414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
178-323
               

               
Cow position:
               
chr9:34666284-34666424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
180-462
               

               
Cow position:
               
chr9:21387262-21387533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
237, 74
               

               
Conread position:
               
180-501
               

               
Cow position:
               
chr9:7952736-7953049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
181-506
               

               
Cow position:
               
chr9:18380703-18381014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
186-418
               

               
Cow position:
               
chr9:39315703-39315916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
188-385
               

               
Cow position:
               
chr9:34034110-34034291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr9:4629949-4630235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
188-509
               

               
Cow position:
               
chr9:26403635-26403943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
306, 61
               

               
Conread position:
               
188-509
               

               
Cow position:
               
chr9:30402589-30402262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
189-298
               

               
Cow position:
               
chr9:60036468-60036574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
189-321
               

               
Cow position:
               
chr9:53323946-53323806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
189-326
               

               
Cow position:
               
chr9:12268876-12269013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
189-326
               

               
Cow position:
               
chr9:20712679-20712819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
189-349
               

               
Cow position:
               
chr9:16115764-16115608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
189-349
               

               
Cow position:
               
chr9:32773063-32773213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
189-350
               

               
Cow position:
               
chr9:45740303-45740141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
189-367
               

               
Cow position:
               
chr9:24079146-24079320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
189-367
               

               
Cow position:
               
chr9:55807475-55807649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
189-376
               

               
Cow position:
               
chr9:55191280-55191464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
189-378
               

               
Cow position:
               
chr9:42508669-42508861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
189-392
               

               
Cow position:
               
chr9:7611946-7611749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
189-396
               

               
Cow position:
               
chr9:39148923-39149126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr9:13742379-13742573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
189-407
               

               
Cow position:
               
chr9:8992338-8992121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 138
               

               
Conread position:
               
189-435
               

               
Cow position:
               
chr9:7806113-7805879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
189-456
               

               
Cow position:
               
chr9:29819567-29819820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
189-468
               

               
Cow position:
               
chr9:19902933-19903196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
189-481
               

               
Cow position:
               
chr9:9724038-9723753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
189-482
               

               
Cow position:
               
chr9:33822958-33823250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
189-497
               

               
Cow position:
               
chr9:41282853-41283158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
189-498
               

               
Cow position:
               
chr9:52407011-52407313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
189-506
               

               
Cow position:
               
chr9:61738762-61739073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 136
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr9:48627864-48628183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
189-507
               

               
Cow position:
               
chr9:49764486-49764811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:3378603-3378902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:5835991-5836317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:6192616-6192305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:6934240-6933916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:9573161-9573490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:9596109-9595797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:9753561-9753231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:10650447-10650145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
297, 23
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:12226144-12225823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
69, 232
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:17799476-17799787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:22152241-22151925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:22318202-22318504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
163, 60
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:28726888-28726563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:30123771-30124078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:31346790-31347112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:32307393-32307079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:34375086-34374774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:34689764-34689444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:40215088-40215401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:48563919-48564240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:50202395-50202727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
69, 237
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:52638329-52638002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:54681362-54681663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:56065407-56065706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr9:59013497-59013176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
189-521
               

               
Cow position:
               
chr9:63785068-63784756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
189-522
               

               
Cow position:
               
chr9:38624783-38624463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
189-526
               

               
Cow position:
               
chr9:43159596-43159915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
189-543
               

               
Cow position:
               
chr9:41679603-41679934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
189-545
               

               
Cow position:
               
chr9:5441852-5442183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
189-547
               

               
Cow position:
               
chr9:25804669-25805027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
189-571
               

               
Cow position:
               
chr9:41789143-41789503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
349, 17
               

               
Conread position:
               
189-722
               

               
Cow position:
               
chr9:36491063-36490514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 146
               

               
Conread position:
               
190-321
               

               
Cow position:
               
chr9:64310937-64310798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
190-322
               

               
Cow position:
               
chr9:4244267-4244407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
190-367
               

               
Cow position:
               
chr9:1712866-1712688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
190-367
               

               
Cow position:
               
chr9:52998536-52998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
190-374
               

               
Cow position:
               
chr9:26394506-26394325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
190-375
               

               
Cow position:
               
chr9:44944631-44944452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
190-379
               

               
Cow position:
               
chr9:34707468-34707282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
190-391
               

               
Cow position:
               
chr9:22165875-22165671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr9:55529645-55529853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 134
               

               
Conread position:
               
190-447
               

               
Cow position:
               
chr9:25400345-25400101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
218, 53
               

               
Conread position:
               
190-448
               

               
Cow position:
               
chr9:5342404-5342155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
190-498
               

               
Cow position:
               
chr9:22443781-22443482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
190-499
               

               
Cow position:
               
chr9:10010654-10010949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 121
               

               
Conread position:
               
190-503
               

               
Cow position:
               
chr9:50977414-50977099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr9:29185298-29184975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 141
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr9:34958210-34957897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr9:39211453-39211765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 63
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr9:42497670-42497987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr9:52578696-52578374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
191-386
               

               
Cow position:
               
chr9:32793980-32794159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
191-391
               

               
Cow position:
               
chr9:21292564-21292365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
191-410
               

               
Cow position:
               
chr9:42586705-42586496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
191-431
               

               
Cow position:
               
chr9:5110699-5110940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
191-484
               

               
Cow position:
               
chr9:60080736-60081038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
191-506
               

               
Cow position:
               
chr9:64105746-64106062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 132
               

               
Conread position:
               
191-509
               

               
Cow position:
               
chr9:8723638-8723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
191-509
               

               
Cow position:
               
chr9:13670479-13670790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
191-514
               

               
Cow position:
               
chr9:6366832-6367140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 67
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr9:49402492-49402704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
192-436
               

               
Cow position:
               
chr9:33541896-33542141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr9:29195188-29194923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
192-468
               

               
Cow position:
               
chr9:54492982-54493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 132
               

               
Conread position:
               
192-484
               

               
Cow position:
               
chr9:38846497-38846211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
192-487
               

               
Cow position:
               
chr9:31359449-31359736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 134
               

               
Conread position:
               
192-509
               

               
Cow position:
               
chr9:55288045-55287740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
192-509
               

               
Cow position:
               
chr9:63896390-63896693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
193-431
               

               
Cow position:
               
chr9:61351500-61351259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr9:51721042-51720744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 55
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr9:41394804-41394537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
194-495
               

               
Cow position:
               
chr9:55438586-55438281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
194-509
               

               
Cow position:
               
chr9:4512327-4512645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 170
               

               
Conread position:
               
194-509
               

               
Cow position:
               
chr9:29006405-29006720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chr9:9580647-9580378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr9:58369143-58368939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
198-410
               

               
Cow position:
               
chr9:59834822-59835018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
199-473
               

               
Cow position:
               
chr9:46930311-46930580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
199-498
               

               
Cow position:
               
chr9:34283804-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
199-509
               

               
Cow position:
               
chr9:23388829-23388520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
200-423
               

               
Cow position:
               
chr9:24652251-24652476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
201-391
               

               
Cow position:
               
chr9:20637228-20637415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
201-508
               

               
Cow position:
               
chr9:22637952-22638260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
201-509
               

               
Cow position:
               
chr9:20322236-20321947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
202-494
               

               
Cow position:
               
chr9:9551946-9552235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
203-353
               

               
Cow position:
               
chr9:44261645-44261502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
203-476
               

               
Cow position:
               
chr9:3353222-3353475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
247, 103
               

               
Conread position:
               
203-508
               

               
Cow position:
               
chr9:33120036-33119729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
203-509
               

               
Cow position:
               
chr9:647629-647933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
204-509
               

               
Cow position:
               
chr9:57897247-57896962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
204-510
               

               
Cow position:
               
chr9:31079222-31078924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
205-354
               

               
Cow position:
               
chr9:54630170-54630315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
206-509
               

               
Cow position:
               
chr9:64091544-64091842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
207-451
               

               
Cow position:
               
chr9:5164129-5163886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
208-473
               

               
Cow position:
               
chr9:21080430-21080684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
208-509
               

               
Cow position:
               
chr9:6338650-6338956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
208-509
               

               
Cow position:
               
chr9:9815270-9815573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
209-358
               

               
Cow position:
               
chr9:48900979-48900827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
209-509
               

               
Cow position:
               
chr9:20847802-20848089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 50
               

               
Conread position:
               
209-547
               

               
Cow position:
               
chr9:20416653-20416320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
210-547
               

               
Cow position:
               
chr9:13205710-13205375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
211-506
               

               
Cow position:
               
chr9:44832185-44831900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
213-506
               

               
Cow position:
               
chr9:17741076-17740793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr9:3774038-3774321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
216-507
               

               
Cow position:
               
chr9:56011371-56011649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
216-509
               

               
Cow position:
               
chr9:41513505-41513782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
274, 85
               

               
Conread position:
               
217-467
               

               
Cow position:
               
chr9:38645471-38645227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr9:29824906-29825194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
223-564
               

               
Cow position:
               
chr9:6596350-6596024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 93
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr9:45171346-45171106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
227-509
               

               
Cow position:
               
chr9:9416517-9416245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
228-393
               

               
Cow position:
               
chr9:61547587-61547742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
232-509
               

               
Cow position:
               
chr9:9199892-9199626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
232-509
               

               
Cow position:
               
chr9:61997715-61997441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
236-380
               

               
Cow position:
               
chr9:35793570-35793708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
238-372
               

               
Cow position:
               
chr9:53496855-53496731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr9:28947756-28948008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
240-487
               

               
Cow position:
               
chr9:53326851-53326615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
241-446
               

               
Cow position:
               
chr9:23797135-23797331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr9:63745716-63745970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
252, 8
               

               
Conread position:
               
243-509
               

               
Cow position:
               
chr9:3738326-3738064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
243-509
               

               
Cow position:
               
chr9:5077807-5077563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
244-365
               

               
Cow position:
               
chr9:23403719-23403834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-373
               

               
Cow position:
               
chr9:26277732-26277852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
244-399
               

               
Cow position:
               
chr9:59699645-59699497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
244-400
               

               
Cow position:
               
chr9:6293495-6293646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
244-423
               

               
Cow position:
               
chr9:49545463-49545296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-446
               

               
Cow position:
               
chr9:43342232-43342424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-455
               

               
Cow position:
               
chr9:19758622-19758812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
244-466
               

               
Cow position:
               
chr9:64064462-64064246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
244-475
               

               
Cow position:
               
chr9:16137441-16137218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
229, 78
               

               
Conread position:
               
244-487
               

               
Cow position:
               
chr9:35105891-35105655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
244-498
               

               
Cow position:
               
chr9:17411292-17411046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-498
               

               
Cow position:
               
chr9:64559981-64559739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
244-504
               

               
Cow position:
               
chr9:62668151-62668405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
244-506
               

               
Cow position:
               
chr9:11313613-11313355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
244-508
               

               
Cow position:
               
chr9:4268083-4267827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
244-508
               

               
Cow position:
               
chr9:50543526-50543267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:1520838-1520576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
245, 33
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:1938025-1938287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:1972849-1973100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
253, 77
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:8288519-8288775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
251, 75
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:8562723-8562995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 78
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:11319733-11319476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
164, 78
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:21888071-21888327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
245, 79
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:22696124-22696381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
242, 76
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:28354418-28354676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:36445515-36445781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:37677793-37678045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
244-509
               

               
Cow position:
               
chr9:50139186-50139443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
244-510
               

               
Cow position:
               
chr9:31638756-31638482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
245-367
               

               
Cow position:
               
chr9:53045444-53045328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
245-384
               

               
Cow position:
               
chr9:34065648-34065513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
245-443
               

               
Cow position:
               
chr9:53751058-53750863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
245-508
               

               
Cow position:
               
chr9:5245754-5246012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr9:3782272-3782518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
238, 51
               

               
Conread position:
               
246-393
               

               
Cow position:
               
chr9:1733247-1733388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-395
               

               
Cow position:
               
chr9:55354514-55354657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-465
               

               
Cow position:
               
chr9:46664728-46664935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
246-470
               

               
Cow position:
               
chr9:52598818-52598605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-506
               

               
Cow position:
               
chr9:18342634-18342879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr9:9654404-9654154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr9:16300667-16300408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr9:18217196-18216946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
254, 76
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr9:30652806-30652548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr9:31098981-31098828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
247-460
               

               
Cow position:
               
chr9:32982171-32981963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
247-481
               

               
Cow position:
               
chr9:15225392-15225169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr9:33940510-33940751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
247-506
               

               
Cow position:
               
chr9:31814482-31814216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr9:9461750-9461497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr9:50081136-50080888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
253, 73
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr9:51204636-51204878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr9:55075223-55074972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
236, 9
               

               
Conread position:
               
247-558
               

               
Cow position:
               
chr9:40542040-40542325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
243, 43
               

               
Conread position:
               
248-463
               

               
Cow position:
               
chr9:55889720-55889922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr9:19067690-19067889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
249-467
               

               
Cow position:
               
chr9:42478576-42478367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr9:17310654-17310416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
159, 10
               

               
Conread position:
               
249-503
               

               
Cow position:
               
chr9:64050655-64050409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
249-507
               

               
Cow position:
               
chr9:5594408-5594656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
249-507
               

               
Cow position:
               
chr9:56772982-56773235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr9:17518583-17518331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
229, 76
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr9:44467434-44467195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr9:47906373-47906122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 41
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr9:54528420-54528671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
245, 73
               

               
Conread position:
               
249-510
               

               
Cow position:
               
chr9:35167082-35167331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
250, 73
               

               
Conread position:
               
250-462
               

               
Cow position:
               
chr9:28378875-28379080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
250-487
               

               
Cow position:
               
chr9:52839972-52839751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
251-450
               

               
Cow position:
               
chr9:9625103-9624912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
251-463
               

               
Cow position:
               
chr9:26310413-26310620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr9:8337935-8338184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
246, 79
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr9:34468670-34468427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr9:42446074-42445821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr9:64155943-64155702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr9:39758427-39758576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr9:30780027-30780195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
252-446
               

               
Cow position:
               
chr9:54615391-54615205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
252-509
               

               
Cow position:
               
chr9:55084392-55084139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
144, 64
               

               
Conread position:
               
253-461
               

               
Cow position:
               
chr9:28754729-28754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
253-509
               

               
Cow position:
               
chr9:43443714-43443954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
254-484
               

               
Cow position:
               
chr9:3343660-3343876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
220, 69
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr9:45756275-45756510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
163, 10
               

               
Conread position:
               
254-509
               

               
Cow position:
               
chr9:5763719-5763476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
255-421
               

               
Cow position:
               
chr9:52828568-52828727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
255-508
               

               
Cow position:
               
chr9:19713992-19714232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
240, 70
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr9:7634183-7634431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr9:9406141-9405893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr9:9443689-9443439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
255-509
               

               
Cow position:
               
chr9:43870887-43871137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
256-481
               

               
Cow position:
               
chr9:10819915-10819703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
256-508
               

               
Cow position:
               
chr9:62357616-62357372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
256-509
               

               
Cow position:
               
chr9:5219259-5219011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
256-521
               

               
Cow position:
               
chr9:33696949-33697197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
167, 33
               

               
Conread position:
               
258-487
               

               
Cow position:
               
chr9:39681254-39681475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
259-507
               

               
Cow position:
               
chr9:28983099-28983335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
259-509
               

               
Cow position:
               
chr9:32115684-32115450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
259-509
               

               
Cow position:
               
chr9:34309945-34310188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
259-513
               

               
Cow position:
               
chr9:11304159-11303915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
259-516
               

               
Cow position:
               
chr9:62656719-62656960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
220, 63
               

               
Conread position:
               
261-506
               

               
Cow position:
               
chr9:32371833-32371606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr9:49293225-49292988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
263-508
               

               
Cow position:
               
chr9:49416907-49417144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
264-404
               

               
Cow position:
               
chr9:6685820-6685954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
264-509
               

               
Cow position:
               
chr9:5319543-5319787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr9:767227-766995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
265-509
               

               
Cow position:
               
chr9:60027119-60027355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr9:5509649-5509879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr9:46316858-46316628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr9:55532738-55532922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
267-509
               

               
Cow position:
               
chr9:6879703-6879924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
267-748
               

               
Cow position:
               
chr9:3220060-3220550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr9:19493541-19493305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr9:23431222-23430988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr9:24872761-24872989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr9:44921474-44921233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
269-503
               

               
Cow position:
               
chr9:51557559-51557345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
270-478
               

               
Cow position:
               
chr9:49688890-49689083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
277-487
               

               
Cow position:
               
chr9:41486308-41486105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
277-509
               

               
Cow position:
               
chr9:9823572-9823348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
278-509
               

               
Cow position:
               
chr9:49709782-49709996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
221, 48
               

               
Conread position:
               
279-560
               

               
Cow position:
               
chr9:43936881-43937147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
214, 44
               

               
Conread position:
               
285-509
               

               
Cow position:
               
chr9:17928699-17928917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
287-487
               

               
Cow position:
               
chr9:6089033-6089227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
288-487
               

               
Cow position:
               
chr9:43875774-43875578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
291-508
               

               
Cow position:
               
chr9:35904797-35904589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr9:22114686-22114477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr9:35375375-35375586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
326-510
               

               
Cow position:
               
chr9:34742746-34742570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
329-508
               

               
Cow position:
               
chr9:22360990-22361168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr9:1952290-1952111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
164, 87
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr9:27029725-27029546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 84
               

               
Conread position:
               
329-509
               

               
Cow position:
               
chr9:36827115-36827288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
334-509
               

               
Cow position:
               
chr9:6225470-6225294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
334-509
               

               
Cow position:
               
chr9:33038476-33038304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
337-548
               

               
Cow position:
               
chr9:24997531-24997326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
341-509
               

               
Cow position:
               
chr9:38343879-38344048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
342-509
               

               
Cow position:
               
chr9:32710922-32711087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
349-509
               

               
Cow position:
               
chr9:30195214-30195367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
352-514
               

               
Cow position:
               
chr9:31270783-31270941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
354-509
               

               
Cow position:
               
chr9:29035031-29034873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
360-509
               

               
Cow position:
               
chr9:1712465-1712319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
362-504
               

               
Cow position:
               
chr9:42509129-42509267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
363-515
               

               
Cow position:
               
chr9:20811051-20810902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
365-509
               

               
Cow position:
               
chr9:4324141-4324000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
371-505
               

               
Cow position:
               
chr9:34666442-34666572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
376-509
               

               
Cow position:
               
chr9:41652813-41652943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
379-509
               

               
Cow position:
               
chr9:60037680-60037811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
383-509
               

               
Cow position:
               
chr9:4928659-4928785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-509
               

               
Cow position:
               
chr9:32829967-32829851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 66
               
Show alignments to all cow chromosomes.