Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006M12.5 |
| Conread position: | 133-477 |
| Cow position: | chr10:9031320-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-604 |
| Cow position: | chr10:9010332-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 134-651 |
| Cow position: | chr10:8996520-8996003 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 134-686 |
| Cow position: | chr10:8996604-8996053 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 480, 475 |
| Conread position: | 135-854 |
| Cow position: | chr10:8996769-8996052 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 150-561 |
| Cow position: | chr10:9031253-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 156-685 |
| Cow position: | chr10:9010394-9009865 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 157-646 |
| Cow position: | chr10:8996413-8995933 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 414, 0 |
| Conread position: | 207-854 |
| Cow position: | chr10:9010511-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 403 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 237, 230 |
| Conread position: | 212-645 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 212-678 |
| Cow position: | chr10:21939094-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 225-774 |
| Cow position: | chr10:9010409-9009860 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 219 |
| Conread position: | 229-941 |
| Cow position: | chr10:9010573-9009858 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 146 |
| Conread position: | 242-1017 |
| Cow position: | chr10:8996832-8996049 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 368 |
| Conread position: | 263-1017 |
| Cow position: | chr10:8996895-8996133 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 461 |
| Conread position: | 296-729 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 374, 370 |
| Conread position: | 300-844 |
| Cow position: | chr10:21939174-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 283, 289 |
| Conread position: | 302-1016 |
| Cow position: | chr10:9010584-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 219 |
| Conread position: | 380-813 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 420-937 |
| Cow position: | chr10:21939376-21938871 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 169, 102 |
| Conread position: | 459-854 |
| Cow position: | chr10:21939099-21938706 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 208, 214 |
| Conread position: | 464-897 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 206, 202 |
| Conread position: | 464-952 |
| Cow position: | chr10:9010590-9010099 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 564-935 |
| Cow position: | chr10:21939162-21938790 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 125 |
| Conread position: | 565-928 |
| Cow position: | chr10:9031248-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 631-1017 |
| Cow position: | chr10:9010591-9010197 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 35 |
Show alignments to all cow chromosomes.