Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006M12.5 |
| Conread position: | 115-437 |
| Cow position: | chr13:39984541-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 153-1016 |
| Cow position: | chr13:39983992-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 220 |
| Conread position: | 167-556 |
| Cow position: | chr13:39984510-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-636 |
| Cow position: | chr13:39984426-39984895 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 270 |
| Conread position: | 168-773 |
| Cow position: | chr13:39984259-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 192-1015 |
| Cow position: | chr13:39983947-39984778 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 77 |
| Conread position: | 206-773 |
| Cow position: | chr13:56333693-56334269 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 160 |
| Conread position: | 207-569 |
| Cow position: | chr13:56292136-56291773 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 212-936 |
| Cow position: | chr13:22124912-22125638 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 421 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 186, 179 |
| Conread position: | 230-636 |
| Cow position: | chr13:56292194-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 238-936 |
| Cow position: | chr13:24162664-24163364 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 407 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 160, 153 |
| Conread position: | 252-892 |
| Cow position: | chr13:39984259-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 89 |
| Conread position: | 256-1084 |
| Cow position: | chr13:39983927-39984768 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 423 |
| Conread position: | 273-917 |
| Cow position: | chr13:56333676-56334329 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 387 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 78 |
| Conread position: | 301-1015 |
| Cow position: | chr13:39983720-39984442 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 435 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 384-906 |
| Cow position: | chr13:24162474-24162996 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 324, 305 |
| Conread position: | 386-924 |
| Cow position: | chr13:39930637-39931175 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 332 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 206, 214 |
| Conread position: | 398-821 |
| Cow position: | chr13:56292194-56291773 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 208, 39 |
| Conread position: | 416-940 |
| Cow position: | chr13:39930583-39931109 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 176, 184 |
Show alignments to all cow chromosomes.