Cow genome map

Conread name: Ss1.1-Pig4-TMW8006M12.5

Conread position: 33-1016
Cow position:
Alignm length: 1003
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 39

Conread position: 120-1016
Cow position:
Alignm length: 912
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 125-935
Cow position:
Alignm length: 819
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 334

Conread position: 125-1007
Cow position:
Alignm length: 896
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 133

Conread position: 128-769
Cow position:
Alignm length: 644
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 141

Conread position: 128-853
Cow position:
Alignm length: 730
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 77

Conread position: 130-687
Cow position:
Alignm length: 563
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 79

Conread position: 131-750
Cow position:
Alignm length: 625
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 132-825
Cow position:
Alignm length: 700
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 136

Conread position: 134-853
Cow position:
Alignm length: 723
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 476

Conread position: 134-1016
Cow position:
Alignm length: 894
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 396

Conread position: 135-935
Cow position:
Alignm length: 807
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 73

Conread position: 148-1016
Cow position:
Alignm length: 884
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 106

Conread position: 152-1016
Cow position:
Alignm length: 877
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 7

Conread position: 156-1021
Cow position:
Alignm length: 879
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 37

Conread position: 157-439
Cow position:
Alignm length: 283
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 157-1013
Cow position:
Alignm length: 874
Alignm identity: 517
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 285, 297

Conread position: 157-1016
Cow position:
Alignm length: 875
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 159-781
Cow position:
Alignm length: 626
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 301

Conread position: 159-904
Cow position:
Alignm length: 749
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 430

Conread position: 159-906
Cow position:
Alignm length: 755
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 88

Conread position: 159-906
Cow position:
Alignm length: 755
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 159-940
Cow position:
Alignm length: 791
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 159-1007
Cow position:
Alignm length: 862
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 64

Conread position: 159-1013
Cow position:
Alignm length: 867
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 159-1016
Cow position:
Alignm length: 871
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 52

Conread position: 168-857
Cow position:
Alignm length: 694
Alignm identity: 413
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 283, 291

Conread position: 168-930
Cow position:
Alignm length: 775
Alignm identity: 463
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 118, 124

Conread position: 193-651
Cow position:
Alignm length: 462
Alignm identity: 276
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 16

Conread position: 198-1016
Cow position:
Alignm length: 838
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 82

Conread position: 204-1015
Cow position:
Alignm length: 826
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 207-782
Cow position:
Alignm length: 582
Alignm identity: 342
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 151, 144

Conread position: 207-953
Cow position:
Alignm length: 752
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 402

Conread position: 207-1007
Cow position:
Alignm length: 816
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 210-679
Cow position:
Alignm length: 475
Alignm identity: 287
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 156

Conread position: 212-603
Cow position:
Alignm length: 392
Alignm identity: 232
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 212-853
Cow position:
Alignm length: 647
Alignm identity: 383
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 42

Conread position: 212-854
Cow position:
Alignm length: 647
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 244

Conread position: 212-902
Cow position:
Alignm length: 698
Alignm identity: 418
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 140, 162

Conread position: 213-904
Cow position:
Alignm length: 698
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 34

Conread position: 214-704
Cow position:
Alignm length: 493
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 138

Conread position: 218-871
Cow position:
Alignm length: 655
Alignm identity: 383
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 409, 389

Conread position: 218-904
Cow position:
Alignm length: 691
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 472

Conread position: 218-904
Cow position:
Alignm length: 688
Alignm identity: 392
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 395, 391

Conread position: 218-935
Cow position:
Alignm length: 729
Alignm identity: 440
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 90, 76

Conread position: 218-937
Cow position:
Alignm length: 729
Alignm identity: 435
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 237, 242

Conread position: 219-906
Cow position:
Alignm length: 694
Alignm identity: 410
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 157

Conread position: 229-909
Cow position:
Alignm length: 691
Alignm identity: 404
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 26

Conread position: 229-1016
Cow position:
Alignm length: 803
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 232

Conread position: 238-931
Cow position:
Alignm length: 701
Alignm identity: 419
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 292, 309

Conread position: 243-906
Cow position:
Alignm length: 673
Alignm identity: 408
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 25, 32

Conread position: 243-935
Cow position:
Alignm length: 701
Alignm identity: 420
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 301, 294

Conread position: 252-928
Cow position:
Alignm length: 686
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 197

Conread position: 273-909
Cow position:
Alignm length: 647
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 97

Conread position: 277-906
Cow position:
Alignm length: 633
Alignm identity: 367
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 83, 75

Conread position: 288-685
Cow position:
Alignm length: 400
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 172

Conread position: 290-1016
Cow position:
Alignm length: 740
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 320

Conread position: 291-1016
Cow position:
Alignm length: 737
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 244

Conread position: 296-688
Cow position:
Alignm length: 394
Alignm identity: 235
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 290, 286

Conread position: 296-854
Cow position:
Alignm length: 562
Alignm identity: 341
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 88

Conread position: 297-854
Cow position:
Alignm length: 561
Alignm identity: 343
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 153, 159

Conread position: 300-783
Cow position:
Alignm length: 486
Alignm identity: 294
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 314, 305

Conread position: 302-854
Cow position:
Alignm length: 558
Alignm identity: 344
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 149, 62

Conread position: 303-820
Cow position:
Alignm length: 520
Alignm identity: 301
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 211, 230

Conread position: 303-871
Cow position:
Alignm length: 573
Alignm identity: 344
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 154

Conread position: 303-906
Cow position:
Alignm length: 608
Alignm identity: 355
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 157

Conread position: 303-923
Cow position:
Alignm length: 631
Alignm identity: 371
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 151

Conread position: 303-937
Cow position:
Alignm length: 643
Alignm identity: 376
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 241, 232

Conread position: 312-854
Cow position:
Alignm length: 548
Alignm identity: 332
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 274, 270

Conread position: 312-1022
Cow position:
Alignm length: 721
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 445

Conread position: 326-1017
Cow position:
Alignm length: 708
Alignm identity: 431
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 30, 50

Conread position: 363-820
Cow position:
Alignm length: 463
Alignm identity: 290
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 93

Conread position: 365-935
Cow position:
Alignm length: 581
Alignm identity: 353
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 76, 98

Conread position: 368-854
Cow position:
Alignm length: 490
Alignm identity: 294
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 16

Conread position: 374-909
Cow position:
Alignm length: 542
Alignm identity: 334
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 77

Conread position: 384-923
Cow position:
Alignm length: 547
Alignm identity: 338
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 138, 157

Conread position: 387-946
Cow position:
Alignm length: 570
Alignm identity: 354
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 46

Conread position: 387-1016
Cow position:
Alignm length: 644
Alignm identity: 379
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 65

Conread position: 417-940
Cow position:
Alignm length: 529
Alignm identity: 313
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 281, 272

Conread position: 454-909
Cow position:
Alignm length: 461
Alignm identity: 275
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 5

Conread position: 530-853
Cow position:
Alignm length: 324
Alignm identity: 198
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 530-1016
Cow position:
Alignm length: 499
Alignm identity: 305
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 345, 325

Show alignments to all cow chromosomes.