• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8006M12.5
        

               
Conread position:
               
1-440
               

               
Cow position:
               
chr18:42959869-42959421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr18:44253461-44252773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
77-940
               

               
Cow position:
               
chr18:41197433-41198292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
110-764
               

               
Cow position:
               
chr18:54993040-54993695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
110-771
               

               
Cow position:
               
chr18:41198048-41198709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-853
               

               
Cow position:
               
chr18:52433037-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 475
               

               
Conread position:
               
113-1013
               

               
Cow position:
               
chr18:52427688-52428597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
916
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 346
               

               
Conread position:
               
116-843
               

               
Cow position:
               
chr18:44154393-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
123-906
               

               
Cow position:
               
chr18:53525671-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 92
               

               
Conread position:
               
125-604
               

               
Cow position:
               
chr18:42744313-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 144
               

               
Conread position:
               
125-853
               

               
Cow position:
               
chr18:43093602-43092874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
125-909
               

               
Cow position:
               
chr18:50848319-50849103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
125-1013
               

               
Cow position:
               
chr18:54992720-54993615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
167, 145
               

               
Conread position:
               
127-529
               

               
Cow position:
               
chr18:42837530-42837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
156, 142
               

               
Conread position:
               
127-687
               

               
Cow position:
               
chr18:54980050-54980609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
127-769
               

               
Cow position:
               
chr18:40324562-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
127-853
               

               
Cow position:
               
chr18:42744563-42743837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
127-854
               

               
Cow position:
               
chr18:40306575-40307302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
127-1013
               

               
Cow position:
               
chr18:40306323-40307217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 154
               

               
Conread position:
               
128-437
               

               
Cow position:
               
chr18:56494167-56494476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
128-520
               

               
Cow position:
               
chr18:40075262-40075654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
128-520
               

               
Cow position:
               
chr18:53586424-53586032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
128-645
               

               
Cow position:
               
chr18:33064111-33063594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
155, 141
               

               
Conread position:
               
128-654
               

               
Cow position:
               
chr18:41198234-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 213
               

               
Conread position:
               
128-781
               

               
Cow position:
               
chr18:42837781-42837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 159
               

               
Conread position:
               
128-853
               

               
Cow position:
               
chr18:42960144-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 394
               

               
Conread position:
               
128-854
               

               
Cow position:
               
chr18:56128360-56129086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
128-860
               

               
Cow position:
               
chr18:43120252-43119521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
128-871
               

               
Cow position:
               
chr18:44398284-44397541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
615, 609
               

               
Conread position:
               
128-904
               

               
Cow position:
               
chr18:44154467-44153695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
128-928
               

               
Cow position:
               
chr18:55017951-55018754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 228
               

               
Conread position:
               
128-944
               

               
Cow position:
               
chr18:41197898-41198712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 155
               

               
Conread position:
               
128-1013
               

               
Cow position:
               
chr18:41949277-41948384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
899
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 141
               

               
Conread position:
               
128-1015
               

               
Cow position:
               
chr18:42790951-42791846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
904
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
129-687
               

               
Cow position:
               
chr18:56434285-56434842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
129-909
               

               
Cow position:
               
chr18:41197647-41198427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
129-940
               

               
Cow position:
               
chr18:42960227-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
130-519
               

               
Cow position:
               
chr18:54968110-54968500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 212
               

               
Conread position:
               
130-657
               

               
Cow position:
               
chr18:44398031-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 495
               

               
Conread position:
               
130-685
               

               
Cow position:
               
chr18:53560166-53560722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
6, 250
               

               
Conread position:
               
130-686
               

               
Cow position:
               
chr18:56434117-56434674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 301
               

               
Conread position:
               
130-687
               

               
Cow position:
               
chr18:53560250-53560804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
130-734
               

               
Cow position:
               
chr18:44398115-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 286
               

               
Conread position:
               
130-769
               

               
Cow position:
               
chr18:54979968-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
130-770
               

               
Cow position:
               
chr18:40075011-40075652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
130-770
               

               
Cow position:
               
chr18:55008715-55009354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
130-847
               

               
Cow position:
               
chr18:54979716-54980434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
6, 141
               

               
Conread position:
               
130-848
               

               
Cow position:
               
chr18:54993228-54993945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 77
               

               
Conread position:
               
130-904
               

               
Cow position:
               
chr18:43093681-43092907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
130-1007
               

               
Cow position:
               
chr18:42985572-42984686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
130-1018
               

               
Cow position:
               
chr18:53586927-53586030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
907
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 140
               

               
Conread position:
               
131-414
               

               
Cow position:
               
chr18:43174778-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
131-570
               

               
Cow position:
               
chr18:44184392-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
131-871
               

               
Cow position:
               
chr18:44240083-44240823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
131-910
               

               
Cow position:
               
chr18:53635802-53635024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
131-935
               

               
Cow position:
               
chr18:40306495-40307300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
132-685
               

               
Cow position:
               
chr18:43093343-43092791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
132-763
               

               
Cow position:
               
chr18:50848746-50849377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
132-853
               

               
Cow position:
               
chr18:40324725-40324004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
132-1015
               

               
Cow position:
               
chr18:41949357-41948466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 137
               

               
Conread position:
               
134-393
               

               
Cow position:
               
chr18:42984727-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
134-436
               

               
Cow position:
               
chr18:42984811-42984509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr18:14453211-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-526
               

               
Cow position:
               
chr18:51789060-51788668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
134-530
               

               
Cow position:
               
chr18:43048735-43048339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
286, 282
               

               
Conread position:
               
134-645
               

               
Cow position:
               
chr18:43022490-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 320
               

               
Conread position:
               
134-649
               

               
Cow position:
               
chr18:40075184-40075699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
134-654
               

               
Cow position:
               
chr18:44184473-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 233
               

               
Conread position:
               
134-718
               

               
Cow position:
               
chr18:42959970-42959396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
134-747
               

               
Cow position:
               
chr18:56247652-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 154
               

               
Conread position:
               
134-749
               

               
Cow position:
               
chr18:43175111-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 568
               

               
Conread position:
               
134-757
               

               
Cow position:
               
chr18:53586502-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
300, 326
               

               
Conread position:
               
134-763
               

               
Cow position:
               
chr18:54966944-54967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
134-769
               

               
Cow position:
               
chr18:51874056-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
134-770
               

               
Cow position:
               
chr18:43093425-43092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
134-782
               

               
Cow position:
               
chr18:42744472-42743824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-848
               

               
Cow position:
               
chr18:44253646-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
134-853
               

               
Cow position:
               
chr18:51368105-51367387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
134-853
               

               
Cow position:
               
chr18:51812639-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
134-854
               

               
Cow position:
               
chr18:49032801-49032081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
134-854
               

               
Cow position:
               
chr18:50099304-50100024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
134-903
               

               
Cow position:
               
chr18:44184725-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 476
               

               
Conread position:
               
134-909
               

               
Cow position:
               
chr18:44184809-44184034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 135
               

               
Conread position:
               
134-928
               

               
Cow position:
               
chr18:42985315-42984519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
134-931
               

               
Cow position:
               
chr18:42744640-42743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 158
               

               
Conread position:
               
134-931
               

               
Cow position:
               
chr18:42985399-42984600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
134-1007
               

               
Cow position:
               
chr18:42675328-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 532
               

               
Conread position:
               
134-1007
               

               
Cow position:
               
chr18:44253814-44252947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
590, 424
               

               
Conread position:
               
134-1007
               

               
Cow position:
               
chr18:54992897-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 95
               

               
Conread position:
               
134-1013
               

               
Cow position:
               
chr18:52447437-52448325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
891
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
533, 537
               

               
Conread position:
               
134-1014
               

               
Cow position:
               
chr18:43094001-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
894
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
134-1015
               

               
Cow position:
               
chr18:42791209-42792098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
134-1017
               

               
Cow position:
               
chr18:40306414-40307305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 240
               

               
Conread position:
               
134-1017
               

               
Cow position:
               
chr18:43175447-43174556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
596, 562
               

               
Conread position:
               
134-1028
               

               
Cow position:
               
chr18:43022994-43022093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
134-1052
               

               
Cow position:
               
chr18:40086610-40085691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
938
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
135-643
               

               
Cow position:
               
chr18:40306835-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 143
               

               
Conread position:
               
135-683
               

               
Cow position:
               
chr18:52012113-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
142-564
               

               
Cow position:
               
chr18:49022899-49023323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 150
               

               
Conread position:
               
144-854
               

               
Cow position:
               
chr18:51839559-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
145-686
               

               
Cow position:
               
chr18:51765489-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
145-764
               

               
Cow position:
               
chr18:55067022-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 147
               

               
Conread position:
               
145-854
               

               
Cow position:
               
chr18:54967792-54968499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
145-928
               

               
Cow position:
               
chr18:55523480-55524265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
220, 212
               

               
Conread position:
               
145-1015
               

               
Cow position:
               
chr18:56248155-56247275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
895
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
146-904
               

               
Cow position:
               
chr18:51813048-51812289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
148-597
               

               
Cow position:
               
chr18:51400707-51401156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
126, 121
               

               
Conread position:
               
148-686
               

               
Cow position:
               
chr18:56128716-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 121
               

               
Conread position:
               
148-825
               

               
Cow position:
               
chr18:50281681-50282360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
139, 144
               

               
Conread position:
               
148-848
               

               
Cow position:
               
chr18:53509329-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
148-1013
               

               
Cow position:
               
chr18:52427975-52428849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
148-1015
               

               
Cow position:
               
chr18:53636122-53635246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
888
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
148-1015
               

               
Cow position:
               
chr18:56128043-56128919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
887
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
148-1016
               

               
Cow position:
               
chr18:52447115-52447991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 244
               

               
Conread position:
               
149-854
               

               
Cow position:
               
chr18:40074947-40075652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
150-853
               

               
Cow position:
               
chr18:51789716-51789013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
150-935
               

               
Cow position:
               
chr18:43175346-43174561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 6
               

               
Conread position:
               
151-494
               

               
Cow position:
               
chr18:33063920-33063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 122
               

               
Conread position:
               
151-853
               

               
Cow position:
               
chr18:53559936-53560638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 221
               

               
Conread position:
               
151-854
               

               
Cow position:
               
chr18:33093095-33092399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 8
               

               
Conread position:
               
151-906
               

               
Cow position:
               
chr18:56316311-56317066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
445, 437
               

               
Conread position:
               
151-938
               

               
Cow position:
               
chr18:52012349-52011561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
151-958
               

               
Cow position:
               
chr18:33064508-33063698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
151-1017
               

               
Cow position:
               
chr18:33064592-33063718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 190
               

               
Conread position:
               
152-909
               

               
Cow position:
               
chr18:49033370-49032614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
367, 5
               

               
Conread position:
               
153-657
               

               
Cow position:
               
chr18:1418098-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
153-749
               

               
Cow position:
               
chr18:14453924-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
156-453
               

               
Cow position:
               
chr18:42744114-42743817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-556
               

               
Cow position:
               
chr18:56329248-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
191, 185
               

               
Conread position:
               
156-645
               

               
Cow position:
               
chr18:44240360-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
282, 303
               

               
Conread position:
               
156-687
               

               
Cow position:
               
chr18:41948829-41948300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 0
               

               
Conread position:
               
156-687
               

               
Cow position:
               
chr18:42985041-42984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
156-769
               

               
Cow position:
               
chr18:42985125-42984512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 207
               

               
Conread position:
               
156-808
               

               
Cow position:
               
chr18:42675054-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 113
               

               
Conread position:
               
156-833
               

               
Cow position:
               
chr18:43175173-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 92
               

               
Conread position:
               
156-852
               

               
Cow position:
               
chr18:44254040-44253349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 112
               

               
Conread position:
               
156-853
               

               
Cow position:
               
chr18:40324617-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
156-853
               

               
Cow position:
               
chr18:42744702-42744005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
156-853
               

               
Cow position:
               
chr18:56248223-56247521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
195, 54
               

               
Conread position:
               
156-859
               

               
Cow position:
               
chr18:42837837-42837135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
156-906
               

               
Cow position:
               
chr18:40324785-40324035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 185
               

               
Conread position:
               
156-906
               

               
Cow position:
               
chr18:50059440-50058690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
196, 211
               

               
Conread position:
               
156-935
               

               
Cow position:
               
chr18:42837921-42837141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
156-1016
               

               
Cow position:
               
chr18:44184871-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 113
               

               
Conread position:
               
156-1016
               

               
Cow position:
               
chr18:56128220-56129088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 220
               

               
Conread position:
               
156-1017
               

               
Cow position:
               
chr18:43175746-43174892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
156-1023
               

               
Cow position:
               
chr18:44239856-44240730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 195
               

               
Conread position:
               
157-437
               

               
Cow position:
               
chr18:51839125-51838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-741
               

               
Cow position:
               
chr18:41948912-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
532, 554
               

               
Conread position:
               
157-769
               

               
Cow position:
               
chr18:51367830-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
157-853
               

               
Cow position:
               
chr18:52432998-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
157-857
               

               
Cow position:
               
chr18:56316233-56316933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 184
               

               
Conread position:
               
157-1013
               

               
Cow position:
               
chr18:52427649-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
157-1070
               

               
Cow position:
               
chr18:33064754-33063827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
931
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
158-810
               

               
Cow position:
               
chr18:40306690-40307342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
158-833
               

               
Cow position:
               
chr18:56329498-56328822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 134
               

               
Conread position:
               
158-920
               

               
Cow position:
               
chr18:42693947-42693184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
159-577
               

               
Cow position:
               
chr18:14453270-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
292, 300
               

               
Conread position:
               
159-689
               

               
Cow position:
               
chr18:51812446-51811916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
159-757
               

               
Cow position:
               
chr18:52428407-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 133
               

               
Conread position:
               
159-757
               

               
Cow position:
               
chr18:52433588-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
159-825
               

               
Cow position:
               
chr18:1417936-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
159-828
               

               
Cow position:
               
chr18:56247711-56247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 204
               

               
Conread position:
               
159-844
               

               
Cow position:
               
chr18:51812698-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 182
               

               
Conread position:
               
159-849
               

               
Cow position:
               
chr18:52428239-52428929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 428
               

               
Conread position:
               
159-849
               

               
Cow position:
               
chr18:52433420-52434110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 428
               

               
Conread position:
               
159-852
               

               
Cow position:
               
chr18:51368416-51367724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
159-853
               

               
Cow position:
               
chr18:52433336-52434030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
159-854
               

               
Cow position:
               
chr18:51812782-51812087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 545
               

               
Conread position:
               
159-906
               

               
Cow position:
               
chr18:44398421-44397674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 300
               

               
Conread position:
               
159-940
               

               
Cow position:
               
chr18:51789623-51788840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 378
               

               
Conread position:
               
159-1007
               

               
Cow position:
               
chr18:43175590-43174734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
733, 706
               

               
Conread position:
               
159-1013
               

               
Cow position:
               
chr18:42960281-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
159-1015
               

               
Cow position:
               
chr18:42791402-42792266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
159-1083
               

               
Cow position:
               
chr18:52447294-52448231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
944
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
161-1007
               

               
Cow position:
               
chr18:51368666-51367812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
165-847
               

               
Cow position:
               
chr18:50022379-50021691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
309, 357
               

               
Conread position:
               
166-852
               

               
Cow position:
               
chr18:50271486-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 125
               

               
Conread position:
               
167-853
               

               
Cow position:
               
chr18:51969287-51969958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
604, 21
               

               
Conread position:
               
167-931
               

               
Cow position:
               
chr18:50083392-50084158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 244
               

               
Conread position:
               
168-690
               

               
Cow position:
               
chr18:51789110-51788590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
436, 458
               

               
Conread position:
               
168-769
               

               
Cow position:
               
chr18:51765971-51765370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
501, 505
               

               
Conread position:
               
168-821
               

               
Cow position:
               
chr18:50246188-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
168-948
               

               
Cow position:
               
chr18:50246020-50246800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
171-904
               

               
Cow position:
               
chr18:51765799-51765067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
180-1013
               

               
Cow position:
               
chr18:40086980-40086140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 12
               

               
Conread position:
               
182-1013
               

               
Cow position:
               
chr18:50848212-50849047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
404, 19
               

               
Conread position:
               
186-1014
               

               
Cow position:
               
chr18:42675360-42674524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 106
               

               
Conread position:
               
194-937
               

               
Cow position:
               
chr18:1417803-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 388
               

               
Conread position:
               
196-615
               

               
Cow position:
               
chr18:51969647-51970056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
410, 7
               

               
Conread position:
               
196-1015
               

               
Cow position:
               
chr18:56329711-56328885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
197-769
               

               
Cow position:
               
chr18:51752110-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
467, 6
               

               
Conread position:
               
197-924
               

               
Cow position:
               
chr18:43120266-43119538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 10
               

               
Conread position:
               
202-516
               

               
Cow position:
               
chr18:42827633-42827952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
154, 139
               

               
Conread position:
               
202-769
               

               
Cow position:
               
chr18:50250977-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
204-619
               

               
Cow position:
               
chr18:14453957-14453542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
83, 88
               

               
Conread position:
               
204-769
               

               
Cow position:
               
chr18:43120092-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 235
               

               
Conread position:
               
204-771
               

               
Cow position:
               
chr18:50083681-50084248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 164
               

               
Conread position:
               
204-773
               

               
Cow position:
               
chr18:50049162-50048591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
204-903
               

               
Cow position:
               
chr18:52433297-52433996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 383
               

               
Conread position:
               
204-911
               

               
Cow position:
               
chr18:43167855-43168560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
503, 475
               

               
Conread position:
               
204-930
               

               
Cow position:
               
chr18:50049076-50048348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 164
               

               
Conread position:
               
204-1004
               

               
Cow position:
               
chr18:54979707-54980515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 171
               

               
Conread position:
               
204-1007
               

               
Cow position:
               
chr18:50099122-50099933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
204-1013
               

               
Cow position:
               
chr18:52427948-52428765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
204-1016
               

               
Cow position:
               
chr18:42985581-42984761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 235
               

               
Conread position:
               
205-577
               

               
Cow position:
               
chr18:42792540-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 161
               

               
Conread position:
               
205-854
               

               
Cow position:
               
chr18:42675173-42674524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 377
               

               
Conread position:
               
205-928
               

               
Cow position:
               
chr18:44398291-44397566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 319
               

               
Conread position:
               
205-1009
               

               
Cow position:
               
chr18:42960481-42959685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
808
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
205-1018
               

               
Cow position:
               
chr18:52447424-52448245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 255
               

               
Conread position:
               
206-535
               

               
Cow position:
               
chr18:53610066-53609737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
156, 146
               

               
Conread position:
               
206-619
               

               
Cow position:
               
chr18:50083851-50084264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
243, 228
               

               
Conread position:
               
206-681
               

               
Cow position:
               
chr18:50295421-50295895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
227, 240
               

               
Conread position:
               
206-686
               

               
Cow position:
               
chr18:53635391-53634912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 358
               

               
Conread position:
               
206-735
               

               
Cow position:
               
chr18:41198228-41198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 243
               

               
Conread position:
               
206-758
               

               
Cow position:
               
chr18:51752018-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
395, 406
               

               
Conread position:
               
206-776
               

               
Cow position:
               
chr18:50021999-50021426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
146, 167
               

               
Conread position:
               
206-847
               

               
Cow position:
               
chr18:50848736-50849377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
206-854
               

               
Cow position:
               
chr18:50031001-50030356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
206-855
               

               
Cow position:
               
chr18:50059054-50058407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
206-855
               

               
Cow position:
               
chr18:50059306-50058657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 135
               

               
Conread position:
               
206-904
               

               
Cow position:
               
chr18:51400345-51401043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
206-931
               

               
Cow position:
               
chr18:50099292-50100019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
206-937
               

               
Cow position:
               
chr18:50848568-50849301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 214
               

               
Conread position:
               
206-940
               

               
Cow position:
               
chr18:42792121-42792857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
629, 633
               

               
Conread position:
               
206-1016
               

               
Cow position:
               
chr18:44184905-44184087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 483
               

               
Conread position:
               
206-1033
               

               
Cow position:
               
chr18:40306318-40307154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 201
               

               
Conread position:
               
207-645
               

               
Cow position:
               
chr18:42984906-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr18:43022501-43022021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 323
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr18:51969575-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
323, 28
               

               
Conread position:
               
207-773
               

               
Cow position:
               
chr18:51839411-51838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-842
               

               
Cow position:
               
chr18:44239823-44240458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 134
               

               
Conread position:
               
207-848
               

               
Cow position:
               
chr18:49032812-49032171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 134
               

               
Conread position:
               
207-851
               

               
Cow position:
               
chr18:52012209-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
207-853
               

               
Cow position:
               
chr18:51752269-51751623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 134
               

               
Conread position:
               
207-935
               

               
Cow position:
               
chr18:43022753-43022024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 232
               

               
Conread position:
               
207-1007
               

               
Cow position:
               
chr18:54979626-54980434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
144, 169
               

               
Conread position:
               
207-1013
               

               
Cow position:
               
chr18:55017946-55018762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 156
               

               
Conread position:
               
207-1015
               

               
Cow position:
               
chr18:42791954-42792770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 161
               

               
Conread position:
               
211-1016
               

               
Cow position:
               
chr18:56329781-56328968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 371
               

               
Conread position:
               
212-769
               

               
Cow position:
               
chr18:50848910-50849467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 164
               

               
Conread position:
               
212-771
               

               
Cow position:
               
chr18:50048900-50048341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
140, 166
               

               
Conread position:
               
212-833
               

               
Cow position:
               
chr18:55523715-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
212-848
               

               
Cow position:
               
chr18:55067039-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 162
               

               
Conread position:
               
212-854
               

               
Cow position:
               
chr18:40074926-40075568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
212-854
               

               
Cow position:
               
chr18:50848658-50849300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
212-855
               

               
Cow position:
               
chr18:50059552-50058909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
214, 199
               

               
Conread position:
               
212-921
               

               
Cow position:
               
chr18:56316036-56316744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 129
               

               
Conread position:
               
212-925
               

               
Cow position:
               
chr18:33064279-33063567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 162
               

               
Conread position:
               
212-937
               

               
Cow position:
               
chr18:49032975-49032248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 503
               

               
Conread position:
               
212-1017
               

               
Cow position:
               
chr18:53559829-53560642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
212-1017
               

               
Cow position:
               
chr18:56329948-56329135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 173
               

               
Conread position:
               
212-1018
               

               
Cow position:
               
chr18:40324813-40323999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 398
               

               
Conread position:
               
213-651
               

               
Cow position:
               
chr18:42827476-42827914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
213-764
               

               
Cow position:
               
chr18:53509310-53509861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
233, 247
               

               
Conread position:
               
213-853
               

               
Cow position:
               
chr18:51752179-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
213-906
               

               
Cow position:
               
chr18:56316205-56316898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 246
               

               
Conread position:
               
213-1016
               

               
Cow position:
               
chr18:43120335-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 298
               

               
Conread position:
               
213-1016
               

               
Cow position:
               
chr18:44239745-44240556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
214-909
               

               
Cow position:
               
chr18:56316122-56316817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
302, 330
               

               
Conread position:
               
214-937
               

               
Cow position:
               
chr18:50083271-50083996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
215-1020
               

               
Cow position:
               
chr18:52447014-52447828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
499, 504
               

               
Conread position:
               
216-1015
               

               
Cow position:
               
chr18:33064947-33064140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
218-769
               

               
Cow position:
               
chr18:53635463-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
218-821
               

               
Cow position:
               
chr18:42827398-42828005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
510, 6
               

               
Conread position:
               
218-851
               

               
Cow position:
               
chr18:53610306-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
218-853
               

               
Cow position:
               
chr18:53610388-53609755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
242, 11
               

               
Conread position:
               
218-859
               

               
Cow position:
               
chr18:51400525-51401167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 409
               

               
Conread position:
               
219-643
               

               
Cow position:
               
chr18:14453294-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
219-928
               

               
Cow position:
               
chr18:49032884-49032173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
219-1007
               

               
Cow position:
               
chr18:54979470-54980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
219-1017
               

               
Cow position:
               
chr18:53509232-53510037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
220-1013
               

               
Cow position:
               
chr18:42744722-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 240
               

               
Conread position:
               
222-935
               

               
Cow position:
               
chr18:50848161-50848878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
223-853
               

               
Cow position:
               
chr18:42837938-42837308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-931
               

               
Cow position:
               
chr18:50059709-50058999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
149, 154
               

               
Conread position:
               
224-645
               

               
Cow position:
               
chr18:51765327-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 117
               

               
Conread position:
               
224-691
               

               
Cow position:
               
chr18:51789222-51788755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
224-908
               

               
Cow position:
               
chr18:14454021-14453337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
224-928
               

               
Cow position:
               
chr18:44240092-44240798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 230
               

               
Conread position:
               
225-822
               

               
Cow position:
               
chr18:42792308-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 127
               

               
Conread position:
               
225-852
               

               
Cow position:
               
chr18:50245993-50246620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
225-855
               

               
Cow position:
               
chr18:50083618-50084248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 315
               

               
Conread position:
               
226-1007
               

               
Cow position:
               
chr18:44254054-44253282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 144
               

               
Conread position:
               
227-853
               

               
Cow position:
               
chr18:50271461-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
228-853
               

               
Cow position:
               
chr18:52427636-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 359
               

               
Conread position:
               
228-1013
               

               
Cow position:
               
chr18:52432985-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 400
               

               
Conread position:
               
229-764
               

               
Cow position:
               
chr18:51969511-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
229-853
               

               
Cow position:
               
chr18:42985136-42984513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 112
               

               
Conread position:
               
229-854
               

               
Cow position:
               
chr18:43094157-43093545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
229-937
               

               
Cow position:
               
chr18:50098979-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
228, 208
               

               
Conread position:
               
229-1017
               

               
Cow position:
               
chr18:40324880-40324084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
651, 637
               

               
Conread position:
               
230-832
               

               
Cow position:
               
chr18:50022399-50021793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
230-1016
               

               
Cow position:
               
chr18:42675404-42674606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 233
               

               
Conread position:
               
231-771
               

               
Cow position:
               
chr18:50295362-50295901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 141
               

               
Conread position:
               
231-853
               

               
Cow position:
               
chr18:43022645-43022023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 125
               

               
Conread position:
               
231-1017
               

               
Cow position:
               
chr18:53587078-53586283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
232-687
               

               
Cow position:
               
chr18:40086090-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
232-898
               

               
Cow position:
               
chr18:50099653-50100320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 205
               

               
Conread position:
               
232-904
               

               
Cow position:
               
chr18:51789967-51789298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
535, 76
               

               
Conread position:
               
237-1013
               

               
Cow position:
               
chr18:53559770-53560554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
237-1015
               

               
Cow position:
               
chr18:51400292-51401078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 388
               

               
Conread position:
               
238-935
               

               
Cow position:
               
chr18:53586734-53586036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
238-935
               

               
Cow position:
               
chr18:56128218-56128916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
349, 344
               

               
Conread position:
               
240-853
               

               
Cow position:
               
chr18:40086672-40086056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
241-782
               

               
Cow position:
               
chr18:49022746-49023287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
242-690
               

               
Cow position:
               
chr18:56494029-56494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
242-769
               

               
Cow position:
               
chr18:53586478-53585952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
242-769
               

               
Cow position:
               
chr18:56493945-56494472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
242-847
               

               
Cow position:
               
chr18:55523325-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
242-853
               

               
Cow position:
               
chr18:41948911-41948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
529, 557
               

               
Conread position:
               
242-853
               

               
Cow position:
               
chr18:56493861-56494472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
242-935
               

               
Cow position:
               
chr18:53610534-53609840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 130
               

               
Conread position:
               
242-1015
               

               
Cow position:
               
chr18:53559943-53560724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 340
               

               
Conread position:
               
242-1016
               

               
Cow position:
               
chr18:56493690-56494475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
242-1031
               

               
Cow position:
               
chr18:40306186-40306983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 361
               

               
Conread position:
               
243-664
               

               
Cow position:
               
chr18:52433756-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
243-769
               

               
Cow position:
               
chr18:56433905-56434421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
243-769
               

               
Cow position:
               
chr18:56434147-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
243-773
               

               
Cow position:
               
chr18:51874081-51874604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
243-853
               

               
Cow position:
               
chr18:52433252-52433862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
243-853
               

               
Cow position:
               
chr18:55008577-55009187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
108, 131
               

               
Conread position:
               
243-856
               

               
Cow position:
               
chr18:50295206-50295819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
243-1007
               

               
Cow position:
               
chr18:54979578-54980350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
201, 187
               

               
Conread position:
               
243-1013
               

               
Cow position:
               
chr18:41949330-41948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
639, 685
               

               
Conread position:
               
243-1016
               

               
Cow position:
               
chr18:53635858-53635077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
243-1070
               

               
Cow position:
               
chr18:52446958-52447799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 224
               

               
Conread position:
               
249-733
               

               
Cow position:
               
chr18:51789113-51788628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
444, 475
               

               
Conread position:
               
249-769
               

               
Cow position:
               
chr18:50098915-50099435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
249-844
               

               
Cow position:
               
chr18:51969131-51969706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
492, 102
               

               
Conread position:
               
249-853
               

               
Cow position:
               
chr18:51789785-51789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
363, 378
               

               
Conread position:
               
250-853
               

               
Cow position:
               
chr18:51752391-51751791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
251-494
               

               
Cow position:
               
chr18:43053433-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-687
               

               
Cow position:
               
chr18:53498337-53498770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
251-1004
               

               
Cow position:
               
chr18:51812774-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 286
               

               
Conread position:
               
251-1017
               

               
Cow position:
               
chr18:49033356-49032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
251-1070
               

               
Cow position:
               
chr18:52446728-52447547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
252-607
               

               
Cow position:
               
chr18:51839198-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-770
               

               
Cow position:
               
chr18:56128652-56129170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
252-847
               

               
Cow position:
               
chr18:54966978-54967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
196, 180
               

               
Conread position:
               
252-904
               

               
Cow position:
               
chr18:51839534-51838882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 359
               

               
Conread position:
               
252-927
               

               
Cow position:
               
chr18:42693769-42693093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
495, 483
               

               
Conread position:
               
252-928
               

               
Cow position:
               
chr18:43167819-43168497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
609, 603
               

               
Conread position:
               
252-931
               

               
Cow position:
               
chr18:50083561-50084242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 122
               

               
Conread position:
               
252-931
               

               
Cow position:
               
chr18:56247786-56247115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 114
               

               
Conread position:
               
252-1007
               

               
Cow position:
               
chr18:42791915-42792678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
252-1016
               

               
Cow position:
               
chr18:53636101-53635329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 441
               

               
Conread position:
               
252-1020
               

               
Cow position:
               
chr18:56128064-56128840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
258-1013
               

               
Cow position:
               
chr18:52427582-52428345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
259-686
               

               
Cow position:
               
chr18:51367646-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 348
               

               
Conread position:
               
259-1013
               

               
Cow position:
               
chr18:52432932-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
275-939
               

               
Cow position:
               
chr18:42790846-42791512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
268, 236
               

               
Conread position:
               
279-854
               

               
Cow position:
               
chr18:42790935-42791509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 11
               

               
Conread position:
               
279-1020
               

               
Cow position:
               
chr18:42675519-42674770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
280-904
               

               
Cow position:
               
chr18:49022617-49023241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
282-948
               

               
Cow position:
               
chr18:52427520-52428187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
282-1013
               

               
Cow position:
               
chr18:52432869-52433610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
283-893
               

               
Cow position:
               
chr18:49022705-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
216, 8
               

               
Conread position:
               
284-935
               

               
Cow position:
               
chr18:43167600-43168251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
290-935
               

               
Cow position:
               
chr18:41949367-41948721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
572, 586
               

               
Conread position:
               
290-940
               

               
Cow position:
               
chr18:50049246-50048590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 296
               

               
Conread position:
               
290-1007
               

               
Cow position:
               
chr18:42837955-42837230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 565
               

               
Conread position:
               
290-1018
               

               
Cow position:
               
chr18:1417815-1418551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
291-928
               

               
Cow position:
               
chr18:54979458-54980097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
291-931
               

               
Cow position:
               
chr18:50271443-50272085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
161, 153
               

               
Conread position:
               
291-1013
               

               
Cow position:
               
chr18:54992718-54993449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
291-1016
               

               
Cow position:
               
chr18:52012377-52011644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 262
               

               
Conread position:
               
296-774
               

               
Cow position:
               
chr18:43048741-43048265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 120
               

               
Conread position:
               
296-1013
               

               
Cow position:
               
chr18:53498040-53498768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
296-1015
               

               
Cow position:
               
chr18:53586928-53586201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
296-1016
               

               
Cow position:
               
chr18:43023084-43022356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 377
               

               
Conread position:
               
296-1017
               

               
Cow position:
               
chr18:49033143-49032414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
296-1020
               

               
Cow position:
               
chr18:50022587-50021849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 92
               

               
Conread position:
               
297-941
               

               
Cow position:
               
chr18:42694060-42693414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
297, 310
               

               
Conread position:
               
298-826
               

               
Cow position:
               
chr18:14454031-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 311
               

               
Conread position:
               
298-827
               

               
Cow position:
               
chr18:44253327-44252809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
315, 210
               

               
Conread position:
               
298-940
               

               
Cow position:
               
chr18:56330114-56329470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 162
               

               
Conread position:
               
298-1017
               

               
Cow position:
               
chr18:50083271-50083998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
299-928
               

               
Cow position:
               
chr18:42744727-42744096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
299-1015
               

               
Cow position:
               
chr18:52012452-52011729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 43
               

               
Conread position:
               
301-720
               

               
Cow position:
               
chr18:14453296-14452877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-690
               

               
Cow position:
               
chr18:51874301-51874689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
303-769
               

               
Cow position:
               
chr18:56128787-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
283, 279
               

               
Conread position:
               
305-935
               

               
Cow position:
               
chr18:53610387-53609756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
147, 134
               

               
Conread position:
               
305-1016
               

               
Cow position:
               
chr18:33065110-33064391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
305-1019
               

               
Cow position:
               
chr18:50245989-50246711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
307-830
               

               
Cow position:
               
chr18:42827402-42827925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
307-933
               

               
Cow position:
               
chr18:56316047-56316674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
383, 405
               

               
Conread position:
               
309-855
               

               
Cow position:
               
chr18:50295356-50295901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
310-1018
               

               
Cow position:
               
chr18:44398439-44397722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
311-578
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
311-1083
               

               
Cow position:
               
chr18:40324882-40324097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 382
               

               
Conread position:
               
313-909
               

               
Cow position:
               
chr18:49033378-49032782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
314-854
               

               
Cow position:
               
chr18:33093101-33092561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 227
               

               
Conread position:
               
314-1015
               

               
Cow position:
               
chr18:49022233-49022940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
250, 245
               

               
Conread position:
               
318-935
               

               
Cow position:
               
chr18:53610542-53609924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 264
               

               
Conread position:
               
320-937
               

               
Cow position:
               
chr18:42675560-42674943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
322-936
               

               
Cow position:
               
chr18:50295201-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
333-735
               

               
Cow position:
               
chr18:56267520-56267118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
275, 294
               

               
Conread position:
               
356-1017
               

               
Cow position:
               
chr18:56247851-56247189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
373-1018
               

               
Cow position:
               
chr18:41197555-41198208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 506
               

               
Conread position:
               
373-1020
               

               
Cow position:
               
chr18:52446920-52447576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
312, 344
               

               
Conread position:
               
375-1013
               

               
Cow position:
               
chr18:44254073-44253431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
231, 163
               

               
Conread position:
               
375-1108
               

               
Cow position:
               
chr18:40086954-40086206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
216, 180
               

               
Conread position:
               
380-1007
               

               
Cow position:
               
chr18:44154467-44153836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 413
               

               
Conread position:
               
383-662
               

               
Cow position:
               
chr18:43053468-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
239, 5
               

               
Conread position:
               
383-858
               

               
Cow position:
               
chr18:14454030-14453556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 226
               

               
Conread position:
               
383-1007
               

               
Cow position:
               
chr18:42744727-42744095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
386-1064
               

               
Cow position:
               
chr18:56248166-56247468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
306, 260
               

               
Conread position:
               
387-808
               

               
Cow position:
               
chr18:14453294-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-853
               

               
Cow position:
               
chr18:51874057-51874516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
387-856
               

               
Cow position:
               
chr18:43167786-43168255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
233, 241
               

               
Conread position:
               
387-904
               

               
Cow position:
               
chr18:51766087-51765571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
355, 9
               

               
Conread position:
               
387-1018
               

               
Cow position:
               
chr18:55067116-55066477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
200, 195
               

               
Conread position:
               
390-1007
               

               
Cow position:
               
chr18:55008556-55009181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
391-855
               

               
Cow position:
               
chr18:42827402-42827866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 300
               

               
Conread position:
               
393-855
               

               
Cow position:
               
chr18:50031066-50030605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 135
               

               
Conread position:
               
395-1017
               

               
Cow position:
               
chr18:56330185-56329555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
276, 271
               

               
Conread position:
               
397-939
               

               
Cow position:
               
chr18:50281678-50282222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
398-853
               

               
Cow position:
               
chr18:53587080-53586623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
404-1013
               

               
Cow position:
               
chr18:55017891-55018509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
182, 178
               

               
Conread position:
               
417-906
               

               
Cow position:
               
chr18:49022670-49023159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
417-906
               

               
Cow position:
               
chr18:55523332-55523821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
105, 146
               

               
Conread position:
               
441-1016
               

               
Cow position:
               
chr18:42837972-42837389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 187
               

               
Conread position:
               
444-1015
               

               
Cow position:
               
chr18:33093140-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 185
               

               
Conread position:
               
458-1015
               

               
Cow position:
               
chr18:56248176-56247603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
459-854
               

               
Cow position:
               
chr18:40074921-40075316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
459-931
               

               
Cow position:
               
chr18:50098957-50099431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
211, 207
               

               
Conread position:
               
464-853
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 146
               

               
Conread position:
               
464-905
               

               
Cow position:
               
chr18:50059720-50059279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
209, 202
               

               
Conread position:
               
476-854
               

               
Cow position:
               
chr18:14453289-14452911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
479-746
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
527-1013
               

               
Cow position:
               
chr18:43023105-43022611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 81
               

               
Conread position:
               
528-1016
               

               
Cow position:
               
chr18:44184919-44184423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
191, 167
               

               
Conread position:
               
529-1014
               

               
Cow position:
               
chr18:56316017-56316510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
382, 403
               

               
Conread position:
               
548-904
               

               
Cow position:
               
chr18:56267473-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
548-935
               

               
Cow position:
               
chr18:43048741-43048353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
555-1013
               

               
Cow position:
               
chr18:55017790-55018257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
559-1015
               

               
Cow position:
               
chr18:40306166-40306631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
562-828
               

               
Cow position:
               
chr18:43053458-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
562-1017
               

               
Cow position:
               
chr18:56330186-56329723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
564-940
               

               
Cow position:
               
chr18:14453285-14452907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
625-1018
               

               
Cow position:
               
chr18:44398459-44398058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
643-1016
               

               
Cow position:
               
chr18:14453290-14452909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
647-1014
               

               
Cow position:
               
chr18:53636126-53635751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
647-1014
               

               
Cow position:
               
chr18:56128039-56128414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
654-1017
               

               
Cow position:
               
chr18:41197500-41197871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 40
               
Show alignments to all cow chromosomes.