Cow genome map

Conread name: Ss1.1-Pig4-TMW8006M12.5

Conread position: 1-1233
Cow position:
Alignm length: 1242
Alignm identity: 899
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 187

Conread position: 2-909
Cow position:
Alignm length: 910
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 664, 669

Conread position: 125-824
Cow position:
Alignm length: 705
Alignm identity: 416
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 83

Conread position: 125-1014
Cow position:
Alignm length: 900
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 330

Conread position: 128-690
Cow position:
Alignm length: 566
Alignm identity: 341
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 158, 164

Conread position: 128-1016
Cow position:
Alignm length: 901
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 142

Conread position: 131-826
Cow position:
Alignm length: 699
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 116

Conread position: 134-825
Cow position:
Alignm length: 696
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 135

Conread position: 134-825
Cow position:
Alignm length: 695
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 135

Conread position: 134-906
Cow position:
Alignm length: 776
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 448

Conread position: 145-855
Cow position:
Alignm length: 712
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 125

Conread position: 148-603
Cow position:
Alignm length: 456
Alignm identity: 268
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 148-1010
Cow position:
Alignm length: 873
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 199

Conread position: 151-857
Cow position:
Alignm length: 711
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 153-700
Cow position:
Alignm length: 550
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 128

Conread position: 156-685
Cow position:
Alignm length: 531
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 304

Conread position: 156-738
Cow position:
Alignm length: 588
Alignm identity: 351
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 291, 303

Conread position: 156-750
Cow position:
Alignm length: 598
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 195

Conread position: 156-909
Cow position:
Alignm length: 754
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 157-852
Cow position:
Alignm length: 697
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 681, 677

Conread position: 157-854
Cow position:
Alignm length: 703
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 90

Conread position: 157-1016
Cow position:
Alignm length: 876
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 112

Conread position: 158-1018
Cow position:
Alignm length: 874
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 158-1248
Cow position:
Alignm length: 1095
Alignm identity: 770
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 341

Conread position: 159-397
Cow position:
Alignm length: 239
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 159-551
Cow position:
Alignm length: 395
Alignm identity: 243
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 49

Conread position: 159-687
Cow position:
Alignm length: 529
Alignm identity: 322
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 159-935
Cow position:
Alignm length: 785
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 110

Conread position: 159-940
Cow position:
Alignm length: 785
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 449

Conread position: 159-1013
Cow position:
Alignm length: 868
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 159-1015
Cow position:
Alignm length: 875
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 109

Conread position: 159-1015
Cow position:
Alignm length: 876
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 182

Conread position: 159-1015
Cow position:
Alignm length: 867
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 296

Conread position: 159-1015
Cow position:
Alignm length: 867
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 121

Conread position: 159-1151
Cow position:
Alignm length: 1016
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 114

Conread position: 163-824
Cow position:
Alignm length: 666
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 277

Conread position: 166-821
Cow position:
Alignm length: 658
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 103

Conread position: 168-940
Cow position:
Alignm length: 781
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 112

Conread position: 186-1015
Cow position:
Alignm length: 846
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 19

Conread position: 203-1007
Cow position:
Alignm length: 818
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 534

Conread position: 204-1016
Cow position:
Alignm length: 826
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 255

Conread position: 205-649
Cow position:
Alignm length: 447
Alignm identity: 276
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 409, 404

Conread position: 205-853
Cow position:
Alignm length: 652
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 70

Conread position: 205-935
Cow position:
Alignm length: 753
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 437

Conread position: 205-1016
Cow position:
Alignm length: 822
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 377

Conread position: 207-659
Cow position:
Alignm length: 458
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 67

Conread position: 207-685
Cow position:
Alignm length: 484
Alignm identity: 302
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 157, 140

Conread position: 207-854
Cow position:
Alignm length: 651
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 207-909
Cow position:
Alignm length: 721
Alignm identity: 400
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 144, 476

Conread position: 207-1015
Cow position:
Alignm length: 819
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 513, 483

Conread position: 207-1016
Cow position:
Alignm length: 830
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 134

Conread position: 210-925
Cow position:
Alignm length: 722
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 212-736
Cow position:
Alignm length: 526
Alignm identity: 319
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 498, 477

Conread position: 212-1012
Cow position:
Alignm length: 814
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 397

Conread position: 212-1015
Cow position:
Alignm length: 813
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 696, 808

Conread position: 218-854
Cow position:
Alignm length: 641
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 74

Conread position: 219-909
Cow position:
Alignm length: 702
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 28

Conread position: 224-904
Cow position:
Alignm length: 682
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 191

Conread position: 224-909
Cow position:
Alignm length: 694
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 230-746
Cow position:
Alignm length: 520
Alignm identity: 314
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 140, 117

Conread position: 230-820
Cow position:
Alignm length: 597
Alignm identity: 366
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 117

Conread position: 231-770
Cow position:
Alignm length: 545
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 133

Conread position: 242-854
Cow position:
Alignm length: 619
Alignm identity: 366
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 35, 27

Conread position: 243-856
Cow position:
Alignm length: 615
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 38

Conread position: 243-1016
Cow position:
Alignm length: 785
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 65

Conread position: 252-1015
Cow position:
Alignm length: 774
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 376

Conread position: 287-1016
Cow position:
Alignm length: 741
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 484

Conread position: 302-853
Cow position:
Alignm length: 553
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 305-1017
Cow position:
Alignm length: 728
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 71

Conread position: 315-854
Cow position:
Alignm length: 545
Alignm identity: 338
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 36, 48

Conread position: 320-824
Cow position:
Alignm length: 510
Alignm identity: 314
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 117, 134

Conread position: 320-854
Cow position:
Alignm length: 537
Alignm identity: 330
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 294, 284

Conread position: 361-905
Cow position:
Alignm length: 548
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 397-1018
Cow position:
Alignm length: 634
Alignm identity: 376
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 203, 217

Conread position: 416-854
Cow position:
Alignm length: 445
Alignm identity: 278
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 117

Conread position: 417-905
Cow position:
Alignm length: 492
Alignm identity: 292
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 127

Conread position: 475-937
Cow position:
Alignm length: 469
Alignm identity: 286
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 146, 132

Conread position: 481-1015
Cow position:
Alignm length: 545
Alignm identity: 324
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 126

Conread position: 485-904
Cow position:
Alignm length: 420
Alignm identity: 262
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 563-1004
Cow position:
Alignm length: 451
Alignm identity: 278
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 83

Conread position: 577-1016
Cow position:
Alignm length: 453
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 282

Show alignments to all cow chromosomes.