Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8006M12.5
        

               Conread position:
               118-1014
               

               Cow position:
               
               

               Alignm length:
               913
               

               Alignm identity:
               535
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               125-603
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               445, 0
               

               Conread position:
               128-607
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               128-909
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               130-502
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 127
               

               Conread position:
               134-704
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               135-854
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               148-904
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               455
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               290, 301
               

               Conread position:
               151-473
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               116, 124
               

               Conread position:
               151-685
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               156-503
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               156-608
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               425, 415
               

               Conread position:
               156-685
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               157-581
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               157-666
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               157-770
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               447, 457
               

               Conread position:
               157-821
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 542
               

               Conread position:
               157-906
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               158-910
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               159-437
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-770
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               345
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               346, 330
               

               Conread position:
               203-569
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               204-645
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               205-802
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 149
               

               Conread position:
               206-809
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               207-579
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               212-853
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 395
               

               Conread position:
               224-649
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 358
               

               Conread position:
               224-822
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               237-770
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               459, 445
               

               Conread position:
               251-940
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 359
               

               Conread position:
               252-579
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               104, 89
               

               Conread position:
               280-750
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 325
               

               Conread position:
               281-854
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 71
               

               Conread position:
               289-857
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               349
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               151, 170
               

               Conread position:
               290-854
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               296-1015
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               437
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               155, 142
               

               Conread position:
               298-1013
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               302-844
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 147
               

               Conread position:
               305-854
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 389
               

               Conread position:
               305-865
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 217
               

               Conread position:
               320-663
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               335-827
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 10
               

               Conread position:
               368-642
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               234, 23
               

               Conread position:
               372-935
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               350
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               380-725
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               238, 230
               

               Conread position:
               380-1013
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               458, 454
               

               Conread position:
               411-685
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               121, 140
               

               Conread position:
               455-1025
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               346
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               252, 20
               

               Conread position:
               457-1014
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 66
               

               Conread position:
               458-909
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               459-769
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               459-1015
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               452, 0
               

               Conread position:
               473-854
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               141, 130
               

               Conread position:
               479-1016
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               263, 258
               

               Conread position:
               483-1016
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               330
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               488-826
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               205, 226
               

               Conread position:
               527-1017
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 164
               

               Conread position:
               554-854
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               564-940
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               579-1007
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               625-906
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               117, 112
               

               Conread position:
               711-928
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               200, 0
               
Show alignments to all cow chromosomes.