Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006M12.5 |
| Conread position: | 128-654 |
| Cow position: | chr24:17078025-17077499 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 129-925 |
| Cow position: | chr24:17036394-17035595 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 212 |
| Conread position: | 134-576 |
| Cow position: | chr24:17070617-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 135-857 |
| Cow position: | chr24:17078270-17077548 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 134 |
| Conread position: | 156-832 |
| Cow position: | chr24:17035694-17035018 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 622, 646 |
| Conread position: | 205-853 |
| Cow position: | chr24:17036401-17035753 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 210 |
| Conread position: | 205-904 |
| Cow position: | chr24:17035729-17035030 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 135 |
| Conread position: | 205-904 |
| Cow position: | chr24:17036233-17035534 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 634, 629 |
| Conread position: | 205-1016 |
| Cow position: | chr24:17036149-17035330 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 579, 588 |
| Conread position: | 206-658 |
| Cow position: | chr24:17070605-17071057 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 239 |
| Conread position: | 206-687 |
| Cow position: | chr24:17070521-17071002 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 206-1016 |
| Cow position: | chr24:17036064-17035246 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 404 |
| Conread position: | 226-581 |
| Cow position: | chr24:17013162-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 137 |
| Conread position: | 251-1016 |
| Cow position: | chr24:17036604-17035834 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 252-769 |
| Cow position: | chr24:17070483-17071000 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 280-853 |
| Cow position: | chr24:17035738-17035165 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 179 |
| Conread position: | 286-860 |
| Cow position: | chr24:17070433-17071007 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 319 |
| Conread position: | 296-665 |
| Cow position: | chr24:17013148-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 142, 164 |
| Conread position: | 380-937 |
| Cow position: | chr24:17078277-17077718 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 234, 230 |
| Conread position: | 394-749 |
| Cow position: | chr24:17013162-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 136, 169 |
| Conread position: | 482-822 |
| Cow position: | chr24:17013166-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 131, 123 |
| Conread position: | 501-690 |
| Cow position: | chr24:16986451-16986640 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 91 |
| Conread position: | 528-1016 |
| Cow position: | chr24:17078297-17077801 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 170, 164 |
| Conread position: | 560-852 |
| Cow position: | chr24:17013161-17013452 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 152, 5 |
| Conread position: | 567-1015 |
| Cow position: | chr24:17070462-17070918 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 632-1016 |
| Cow position: | chr24:17070443-17070835 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 276, 362 |
Show alignments to all cow chromosomes.