Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006M12.5 |
| Conread position: | 125-769 |
| Cow position: | chr8:46816698-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 386 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 263, 257 |
| Conread position: | 128-1016 |
| Cow position: | chr8:45201002-45201898 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 129-770 |
| Cow position: | chr8:55581058-55581700 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 129-853 |
| Cow position: | chr8:48407562-48406837 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 134-801 |
| Cow position: | chr8:55580980-55581649 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 134-854 |
| Cow position: | chr8:46816035-46816755 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 448 |
| Conread position: | 144-512 |
| Cow position: | chr8:45201607-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 153-821 |
| Cow position: | chr8:45201279-45201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 99 |
| Conread position: | 158-909 |
| Cow position: | chr8:45200948-45201699 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 158-923 |
| Cow position: | chr8:55580920-55581687 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 159-1013 |
| Cow position: | chr8:48407195-48406332 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 165-927 |
| Cow position: | chr8:55580843-55581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 168-603 |
| Cow position: | chr8:55581266-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 205-735 |
| Cow position: | chr8:48407317-48406787 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 147 |
| Conread position: | 205-904 |
| Cow position: | chr8:48407569-48406870 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 205-928 |
| Cow position: | chr8:46816442-46817167 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 404 |
| Conread position: | 206-827 |
| Cow position: | chr8:46816695-46817316 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 135 |
| Conread position: | 213-855 |
| Cow position: | chr8:46816618-46817260 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 224 |
| Conread position: | 224-853 |
| Cow position: | chr8:46816377-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 227 |
| Conread position: | 231-1015 |
| Cow position: | chr8:46815962-46816756 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 147 |
| Conread position: | 235-844 |
| Cow position: | chr8:55580747-55581354 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 248-651 |
| Cow position: | chr8:6958060-6957658 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 281, 285 |
| Conread position: | 251-651 |
| Cow position: | chr8:48406683-48406283 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 252-750 |
| Cow position: | chr8:45201462-45201960 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-1016 |
| Cow position: | chr8:45200913-45201646 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 101 |
| Conread position: | 298-690 |
| Cow position: | chr8:48406721-48406328 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 388-935 |
| Cow position: | chr8:48407638-48407090 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 348 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 395-1013 |
| Cow position: | chr8:55580736-55581362 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 393 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 479-1016 |
| Cow position: | chr8:48407631-48407086 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 561-1016 |
| Cow position: | chr8:48407633-48407170 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 33 |
Show alignments to all cow chromosomes.