Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8006M12.5 |
| Conread position: | 120-937 |
| Cow position: | chrX:25325443-25324624 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 250 |
| Conread position: | 128-854 |
| Cow position: | chrX:25325015-25324289 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 562, 581 |
| Conread position: | 128-855 |
| Cow position: | chrX:25309708-25310433 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 16 |
| Conread position: | 130-657 |
| Cow position: | chrX:29045191-29044663 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 76 |
| Conread position: | 134-747 |
| Cow position: | chrX:25324841-25324230 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 134-751 |
| Cow position: | chrX:29045270-29044653 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 135-935 |
| Cow position: | chrX:25325258-25324459 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 151-686 |
| Cow position: | chrX:12627529-12628063 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 159-454 |
| Cow position: | chrX:12627788-12628083 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 197-1016 |
| Cow position: | chrX:25309691-25310518 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 205-664 |
| Cow position: | chrX:25310119-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 206-822 |
| Cow position: | chrX:25309952-25310568 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 327 |
| Conread position: | 206-854 |
| Cow position: | chrX:25325525-25324877 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 325 |
| Conread position: | 206-904 |
| Cow position: | chrX:12627333-12628029 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 168 |
| Conread position: | 207-748 |
| Cow position: | chrX:25310037-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 207-854 |
| Cow position: | chrX:25325272-25324625 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 145 |
| Conread position: | 207-904 |
| Cow position: | chrX:25309869-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 649 |
| Conread position: | 213-558 |
| Cow position: | chrX:29045758-29045413 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 321, 317 |
| Conread position: | 224-822 |
| Cow position: | chrX:25324835-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 143 |
| Conread position: | 224-854 |
| Cow position: | chrX:25325759-25325129 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 145 |
| Conread position: | 229-827 |
| Cow position: | chrX:29045259-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 116 |
| Conread position: | 229-854 |
| Cow position: | chrX:25325084-25324457 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 439 |
| Conread position: | 230-853 |
| Cow position: | chrX:12627441-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 231-924 |
| Cow position: | chrX:14181640-14180944 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 407 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 251-935 |
| Cow position: | chrX:25325564-25324879 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 364 |
| Conread position: | 254-854 |
| Cow position: | chrX:29045318-29044718 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 261-844 |
| Cow position: | chrX:14181525-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 271-759 |
| Cow position: | chrX:29045867-29045380 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 302 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 278-1007 |
| Cow position: | chrX:25325874-25325136 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 456 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 287-1013 |
| Cow position: | chrX:12627330-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 154 |
| Conread position: | 297-1014 |
| Cow position: | chrX:25309707-25310432 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 300-854 |
| Cow position: | chrX:13826792-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 340 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 303-641 |
| Cow position: | chrX:14181231-14180893 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 195, 200 |
| Conread position: | 321-1014 |
| Cow position: | chrX:12627280-12627979 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 426 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 128, 136 |
| Conread position: | 334-858 |
| Cow position: | chrX:25309660-25310183 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 384-935 |
| Cow position: | chrX:13826876-13826324 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 391-769 |
| Cow position: | chrX:29045832-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 465-853 |
| Cow position: | chrX:29045842-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 277, 272 |
Show alignments to all cow chromosomes.