Cow genome map

Conread name: Ss1.1-Pig4-TMW8011J19.5

Conread position: 104-748
Cow position: chr12:1405022-1405677 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 454

Conread position: 366-737
Cow position: chr12:1174174-1173786 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 66

Conread position: 367-749
Cow position: chr12:19861525-19861899 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 11

Conread position: 371-594
Cow position: chr12:4379007-4378784 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 122

Conread position: 374-736
Cow position: chr12:36341592-36341221 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 25

Conread position: 375-736
Cow position: chr12:36453703-36453331 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 24

Conread position: 379-727
Cow position: chr12:23944000-23944362 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 74

Conread position: 382-737
Cow position: chr12:27506797-27506432 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 21

Conread position: 382-749
Cow position: chr12:10930928-10931314 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 21

Conread position: 389-730
Cow position: chr12:32066422-32066771 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 390-702
Cow position: chr12:21945902-21946219 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 13

Conread position: 391-608
Cow position: chr12:10542181-10541962 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 12

Conread position: 391-624
Cow position: chr12:36204611-36204851 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 12

Conread position: 391-629
Cow position: chr12:35302215-35302458 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 12

Conread position: 391-652
Cow position: chr12:34383803-34384077 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 12

Conread position: 391-737
Cow position: chr12:8628335-8627984 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 15

Conread position: 391-748
Cow position: chr12:20846999-20847364 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 17

Conread position: 392-737
Cow position: chr12:4783629-4783273 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 174

Conread position: 393-643
Cow position: chr12:20109829-20109571 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 93

Conread position: 399-736
Cow position: chr12:42193101-42193430 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 94

Conread position: 399-749
Cow position: chr12:17968855-17969217 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 32, 312

Conread position: 399-749
Cow position: chr12:21074703-21075065 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 131

Conread position: 400-625
Cow position: chr12:1500016-1500243 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 39

Conread position: 400-676
Cow position: chr12:33283514-33283231 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 165

Conread position: 400-682
Cow position: chr12:42194503-42194798 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 21

Conread position: 400-725
Cow position: chr12:1775049-1774713 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 166

Conread position: 400-736
Cow position: chr12:36486874-36486527 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 400-740
Cow position: chr12:30501508-30501861 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 177

Conread position: 400-742
Cow position: chr12:35367272-35367623 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 178

Conread position: 400-749
Cow position: chr12:1407699-1408047 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 166

Conread position: 400-749
Cow position: chr12:21314563-21314200 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 159

Conread position: 400-750
Cow position: chr12:4830095-4830447 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 82

Conread position: 400-754
Cow position: chr12:47803044-47803407 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 81

Conread position: 403-547
Cow position: chr12:26822556-26822707 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 403-625
Cow position: chr12:24029859-24029637 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 139

Conread position: 403-646
Cow position: chr12:13115712-13115472 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 17

Conread position: 403-697
Cow position: chr12:32986406-32986710 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 161

Conread position: 403-705
Cow position: chr12:8641649-8641966 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 403-705
Cow position: chr12:22202797-22202479 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 157

Conread position: 403-705
Cow position: chr12:28764128-28763811 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 126

Conread position: 403-737
Cow position: chr12:487542-487883 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 19, 13

Conread position: 403-737
Cow position: chr12:551944-551597 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 157

Conread position: 403-737
Cow position: chr12:8675193-8674848 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 28, 327

Conread position: 403-737
Cow position: chr12:11101119-11101465 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 174

Conread position: 403-737
Cow position: chr12:42797883-42798225 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 41

Conread position: 403-740
Cow position: chr12:22565911-22566255 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 85, 12

Conread position: 403-740
Cow position: chr12:23100166-23099829 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 48

Conread position: 403-742
Cow position: chr12:27853075-27852719 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 28, 177

Conread position: 403-742
Cow position: chr12:33689536-33689875 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 168

Conread position: 403-749
Cow position: chr12:3717403-3717044 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 403-749
Cow position: chr12:12755284-12754927 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 157

Conread position: 403-749
Cow position: chr12:23491862-23491505 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 15, 160

Conread position: 403-749
Cow position: chr12:27993971-27994330 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 177

Conread position: 403-749
Cow position: chr12:34176235-34176594 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 157

Conread position: 403-749
Cow position: chr12:42232180-42232539 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 177

Conread position: 403-754
Cow position: chr12:18585547-18585907 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 90, 22

Conread position: 405-628
Cow position: chr12:12295410-12295634 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 42

Conread position: 405-740
Cow position: chr12:2285144-2285496 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 159

Conread position: 405-740
Cow position: chr12:41338357-41338012 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 115

Conread position: 405-751
Cow position: chr12:8137108-8136759 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 66

Conread position: 407-742
Cow position: chr12:13259295-13259639 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 248

Conread position: 407-746
Cow position: chr12:41288212-41288558 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 152

Conread position: 409-753
Cow position: chr12:22748092-22748448 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 12

Conread position: 410-625
Cow position: chr12:22480118-22479897 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 150

Conread position: 410-737
Cow position: chr12:25097386-25097048 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 21, 186

Conread position: 410-742
Cow position: chr12:21201688-21202012 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 154

Conread position: 410-747
Cow position: chr12:250435-250091 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 170

Conread position: 410-749
Cow position: chr12:758298-758650 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 144

Conread position: 410-749
Cow position: chr12:20459841-20459490 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 150

Conread position: 410-749
Cow position: chr12:27929914-27929562 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 410-751
Cow position: chr12:42856653-42856299 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 168

Conread position: 413-654
Cow position: chr12:1469244-1468995 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 145

Conread position: 413-737
Cow position: chr12:1886471-1886141 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 147

Conread position: 413-749
Cow position: chr12:1056627-1056278 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 169

Conread position: 413-749
Cow position: chr12:14568934-14568585 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 141

Conread position: 413-749
Cow position: chr12:17718181-17718530 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 147

Conread position: 414-740
Cow position: chr12:15080467-15080802 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 159

Conread position: 415-642
Cow position: chr12:3363826-3364061 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 145

Conread position: 415-653
Cow position: chr12:536686-536440 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 145

Conread position: 415-687
Cow position: chr12:24992940-24992653 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 145

Conread position: 415-705
Cow position: chr12:24696429-24696733 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 10

Conread position: 415-738
Cow position: chr12:20994876-20994546 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 66

Conread position: 415-740
Cow position: chr12:32656437-32656769 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 158

Conread position: 415-748
Cow position: chr12:5328027-5327681 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 145

Conread position: 415-748
Cow position: chr12:31027938-31027591 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 167

Conread position: 415-749
Cow position: chr12:62325-61978 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr12:1491049-1491396 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr12:5106940-5107287 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr12:10358578-10358925 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 10

Conread position: 415-749
Cow position: chr12:21665019-21665365 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 55

Conread position: 415-749
Cow position: chr12:25148735-25148389 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 10

Conread position: 415-749
Cow position: chr12:25266450-25266104 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 165

Conread position: 415-749
Cow position: chr12:27958643-27958296 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr12:32757579-32757926 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 10

Conread position: 415-749
Cow position: chr12:35548244-35547899 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr12:37561891-37562236 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 163

Conread position: 415-749
Cow position: chr12:38893245-38893593 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 146

Conread position: 415-749
Cow position: chr12:39930051-39930398 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-751
Cow position: chr12:1511881-1511532 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 164

Conread position: 415-752
Cow position: chr12:1006898-1007248 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 145

Conread position: 415-753
Cow position: chr12:35161490-35161841 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-753
Cow position: chr12:35162646-35162997 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 421-728
Cow position: chr12:10486369-10486677 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 69

Conread position: 421-749
Cow position: chr12:45144946-45145282 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 12, 63

Conread position: 422-738
Cow position: chr12:42558163-42557847 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 95

Conread position: 422-743
Cow position: chr12:43457160-43456831 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 49

Conread position: 424-704
Cow position: chr12:1107935-1108226 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 80

Conread position: 428-721
Cow position: chr12:21705974-21705675 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 133

Conread position: 428-749
Cow position: chr12:32011885-32011548 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 151

Conread position: 429-681
Cow position: chr12:46163637-46163903 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 130

Conread position: 429-716
Cow position: chr12:42605278-42604976 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 63, 130

Conread position: 429-721
Cow position: chr12:26870205-26870511 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 135

Conread position: 429-737
Cow position: chr12:8626208-8626520 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 124

Conread position: 429-737
Cow position: chr12:19871112-19871429 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 125

Conread position: 429-737
Cow position: chr12:21392126-21391805 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 153

Conread position: 429-742
Cow position: chr12:24980619-24980943 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 128

Conread position: 429-747
Cow position: chr12:6106449-6106121 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 24

Conread position: 429-748
Cow position: chr12:25143815-25143492 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 60

Conread position: 429-749
Cow position: chr12:12929008-12928677 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 78

Conread position: 430-740
Cow position: chr12:32219996-32220319 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 38

Conread position: 431-749
Cow position: chr12:19197948-19198265 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 125

Conread position: 431-749
Cow position: chr12:27614315-27614645 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 133

Conread position: 432-611
Cow position: chr12:12242134-12242325 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 434-749
Cow position: chr12:21484315-21484640 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 132

Conread position: 434-751
Cow position: chr12:30686643-30686973 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 58, 117

Conread position: 435-736
Cow position: chr12:10165049-10164744 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 136, 44

Conread position: 443-737
Cow position: chr12:5712874-5713181 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 111

Conread position: 443-742
Cow position: chr12:19040525-19040836 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 139

Conread position: 443-754
Cow position: chr12:25939360-25939051 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 28

Conread position: 445-707
Cow position: chr12:21904281-21904556 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 18

Conread position: 446-749
Cow position: chr12:21251397-21251085 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 90

Conread position: 450-747
Cow position: chr12:8773584-8773894 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 103

Conread position: 457-704
Cow position: chr12:5222232-5221981 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 107

Conread position: 459-737
Cow position: chr12:4010678-4010964 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 53

Conread position: 472-740
Cow position: chr12:48416804-48416526 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 81

Conread position: 487-733
Cow position: chr12:15230987-15231248 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 238

Conread position: 487-734
Cow position: chr12:16438984-16439240 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 75

Conread position: 487-742
Cow position: chr12:9988728-9988464 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 241

Conread position: 487-749
Cow position: chr12:5777170-5776900 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 87

Conread position: 487-749
Cow position: chr12:8839212-8839483 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 87

Conread position: 488-737
Cow position: chr12:17412171-17411918 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 73

Conread position: 492-749
Cow position: chr12:15925787-15925522 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 82

Conread position: 502-749
Cow position: chr12:16302360-16302109 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 40

Conread position: 509-749
Cow position: chr12:15939880-15939632 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 68

Conread position: 510-749
Cow position: chr12:36288030-36287783 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 64

Conread position: 510-752
Cow position: chr12:23512196-23511945 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 64

Conread position: 512-749
Cow position: chr12:33925713-33925468 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 62

Conread position: 514-747
Cow position: chr12:28737512-28737752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 39

Conread position: 517-740
Cow position: chr12:15208538-15208767 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 45

Conread position: 526-749
Cow position: chr12:21010476-21010249 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 16

Conread position: 534-737
Cow position: chr12:8343042-8342847 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 172, 24

Conread position: 535-749
Cow position: chr12:31829440-31829220 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 37

Conread position: 538-749
Cow position: chr12:46112105-46111888 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 34

Conread position: 555-749
Cow position: chr12:258758-258959 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 171

Conread position: 555-749
Cow position: chr12:32340228-32340027 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 171

Conread position: 560-749
Cow position: chr12:7673935-7674131 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 166

Show alignments to all cow chromosomes.