Cow genome map

Conread name: Ss1.1-Pig4-TMW8011J19.5

Conread position: 379-749
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 42

Conread position: 381-616
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 18

Conread position: 381-742
Cow position:
Alignm length: 381
Alignm identity: 255
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 18

Conread position: 388-749
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 389-618
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 112

Conread position: 389-749
Cow position:
Alignm length: 376
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 171

Conread position: 391-584
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 8

Conread position: 391-647
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 12

Conread position: 391-715
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 12

Conread position: 391-740
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 12

Conread position: 391-740
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 14

Conread position: 391-740
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 39, 12

Conread position: 391-740
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 12

Conread position: 393-530
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 393-742
Cow position:
Alignm length: 364
Alignm identity: 237
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 62

Conread position: 394-730
Cow position:
Alignm length: 347
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 144, 126

Conread position: 395-749
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 67, 8

Conread position: 398-653
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 5

Conread position: 398-742
Cow position:
Alignm length: 356
Alignm identity: 245
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 173

Conread position: 399-658
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 182

Conread position: 399-749
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 333

Conread position: 400-625
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 24

Conread position: 400-647
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 155

Conread position: 400-683
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 8

Conread position: 400-687
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 80

Conread position: 400-716
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 156

Conread position: 400-722
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 141

Conread position: 400-737
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 148

Conread position: 400-740
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 94

Conread position: 400-749
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 161

Conread position: 400-749
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 8

Conread position: 400-749
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 50

Conread position: 403-582
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 157

Conread position: 403-612
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 151

Conread position: 403-613
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 60

Conread position: 403-632
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 75

Conread position: 403-660
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 75

Conread position: 403-700
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 28, 11

Conread position: 403-711
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 5

Conread position: 403-736
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 403-736
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 17

Conread position: 403-736
Cow position:
Alignm length: 355
Alignm identity: 233
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 17

Conread position: 403-736
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 67

Conread position: 403-737
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 87

Conread position: 403-737
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 106

Conread position: 403-737
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 73

Conread position: 403-737
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 176

Conread position: 403-740
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 26

Conread position: 403-740
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 151

Conread position: 403-740
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 71

Conread position: 403-749
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 155

Conread position: 403-749
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 157

Conread position: 403-749
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 27, 156

Conread position: 403-749
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 174

Conread position: 403-749
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 403-749
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 18

Conread position: 405-697
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 172

Conread position: 405-732
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 26, 86

Conread position: 407-704
Cow position:
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 35

Conread position: 409-749
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 410-704
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 166

Conread position: 410-749
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 167

Conread position: 410-749
Cow position:
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 167

Conread position: 410-749
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 410-749
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 410-754
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 148

Conread position: 412-749
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 167

Conread position: 413-692
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 167

Conread position: 413-737
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 413-747
Cow position:
Alignm length: 352
Alignm identity: 236
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 153

Conread position: 415-647
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 16, 145

Conread position: 415-647
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 145

Conread position: 415-647
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 145

Conread position: 415-647
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 145

Conread position: 415-748
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 162

Conread position: 415-749
Cow position:
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 165

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 105

Conread position: 415-749
Cow position:
Alignm length: 352
Alignm identity: 236
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 153

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 49

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 415-751
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 163

Conread position: 415-754
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 416-737
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 14, 5

Conread position: 416-737
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 5

Conread position: 416-740
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 143

Conread position: 416-749
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 5

Conread position: 417-736
Cow position:
Alignm length: 333
Alignm identity: 219
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 5

Conread position: 417-749
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 161

Conread position: 423-665
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 15

Conread position: 426-659
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 21

Conread position: 426-749
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 133

Conread position: 429-653
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 130

Conread position: 429-740
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 150

Conread position: 429-740
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 198, 116

Conread position: 429-749
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 128

Conread position: 429-749
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 147

Conread position: 429-749
Cow position:
Alignm length: 343
Alignm identity: 226
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 129

Conread position: 429-749
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 130

Conread position: 430-749
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 123

Conread position: 430-749
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 62, 129

Conread position: 439-719
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 43

Conread position: 442-743
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 123

Conread position: 444-749
Cow position:
Alignm length: 321
Alignm identity: 224
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 115

Conread position: 445-747
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 284

Conread position: 450-737
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 108

Conread position: 450-740
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 129

Conread position: 451-749
Cow position:
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 127

Conread position: 453-716
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 111

Conread position: 461-740
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 91

Conread position: 464-653
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 46

Conread position: 464-748
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 114

Conread position: 476-740
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 29

Conread position: 477-742
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 85

Conread position: 487-749
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 87

Conread position: 487-749
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 87

Conread position: 489-692
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 43

Conread position: 489-722
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 63

Conread position: 493-737
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 179

Conread position: 493-750
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 68

Conread position: 511-749
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 61

Conread position: 517-742
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 43

Conread position: 553-737
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 173

Conread position: 554-749
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 171

Conread position: 559-749
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 166

Conread position: 566-749
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 161

Conread position: 570-751
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 155

Conread position: 571-749
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 147

Conread position: 630-737
Cow position:
Alignm length: 108
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.