Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8011J19.5
        

               Conread position:
               94-637
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               128-749
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               499, 598
               

               Conread position:
               373-737
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               382-719
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               391-625
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               391-740
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               393-732
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               393-740
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               399-742
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               400-573
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               73, 164
               

               Conread position:
               400-589
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 162
               

               Conread position:
               400-737
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               31, 171
               

               Conread position:
               400-749
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               402-666
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               403-647
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               403-647
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 153
               

               Conread position:
               403-653
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               403-722
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               403-737
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               403-737
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               29, 156
               

               Conread position:
               403-737
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               403-738
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               403-740
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               403-740
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 223
               

               Conread position:
               403-740
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 316
               

               Conread position:
               403-742
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               403-742
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               403-746
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 176
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               403-749
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               405-740
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               405-747
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               405-749
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               406-700
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               406-750
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               410-671
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               410-740
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               410-747
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 171
               

               Conread position:
               413-656
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               413-724
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               413-749
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               415-625
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-647
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-658
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-710
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               415-738
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-740
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-744
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               415-747
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 165
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 318
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               415-749
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               416-737
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               416-740
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               417-749
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               421-749
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 128
               

               Conread position:
               422-740
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               429-704
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               182, 40
               

               Conread position:
               429-736
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               59, 123
               

               Conread position:
               429-737
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 133
               

               Conread position:
               429-738
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               429-742
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               70, 313
               

               Conread position:
               429-749
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               429-749
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               59, 147
               

               Conread position:
               430-737
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               430-737
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 128
               

               Conread position:
               431-715
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               431-732
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               109, 73
               

               Conread position:
               431-749
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               443-740
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               443-749
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               443-749
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               448-658
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               449-737
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               455-749
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               456-741
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               28, 142
               

               Conread position:
               466-749
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               34, 112
               

               Conread position:
               471-740
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               473-750
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               487-745
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               494-740
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 48
               

               Conread position:
               500-749
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 74
               

               Conread position:
               500-752
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 228
               

               Conread position:
               510-749
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               521-749
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               537-702
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               555-749
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 171
               
Show alignments to all cow chromosomes.