Cow genome map

Conread name: Ss1.1-Pig4-TMW8011J19.5

Conread position: 94-637
Cow position: chr27:21684776-21684231 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 111

Conread position: 128-749
Cow position: chr27:19487606-19488234 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 499, 598

Conread position: 373-737
Cow position: chr27:31547701-31547319 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 26

Conread position: 382-719
Cow position: chr27:615918-615579 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 21

Conread position: 391-625
Cow position: chr27:30571694-30571928 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 14

Conread position: 391-740
Cow position: chr27:17567964-17568322 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 393-732
Cow position: chr27:23905668-23906018 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 25

Conread position: 393-740
Cow position: chr27:1082296-1081941 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 38, 19

Conread position: 399-742
Cow position: chr27:27235238-27234881 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 154

Conread position: 400-573
Cow position: chr27:143944-144127 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 164

Conread position: 400-589
Cow position: chr27:16582599-16582402 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 162

Conread position: 400-737
Cow position: chr27:28894862-28895221 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 171

Conread position: 400-749
Cow position: chr27:26329801-26330162 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 151

Conread position: 402-666
Cow position: chr27:20281917-20281640 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 403-647
Cow position: chr27:10379058-10379309 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 403-647
Cow position: chr27:23075075-23074827 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 153

Conread position: 403-653
Cow position: chr27:13900765-13901023 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 157

Conread position: 403-722
Cow position: chr27:30750506-30750190 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 71

Conread position: 403-737
Cow position: chr27:4331869-4331522 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 157

Conread position: 403-737
Cow position: chr27:8426729-8427075 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 156

Conread position: 403-737
Cow position: chr27:31268097-31268434 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 89

Conread position: 403-738
Cow position: chr27:12749904-12750243 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 93

Conread position: 403-740
Cow position: chr27:17422463-17422805 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 403-740
Cow position: chr27:26621381-26621035 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 223

Conread position: 403-740
Cow position: chr27:27665872-27666227 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 316

Conread position: 403-742
Cow position: chr27:9255265-9254919 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 28, 57

Conread position: 403-742
Cow position: chr27:26784693-26785045 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 151

Conread position: 403-746
Cow position: chr27:27193490-27193138 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 41

Conread position: 403-749
Cow position: chr27:1536052-1536400 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 151

Conread position: 403-749
Cow position: chr27:2000716-2001075 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 157

Conread position: 403-749
Cow position: chr27:4982243-4982602 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 403-749
Cow position: chr27:5913810-5914163 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 28, 55

Conread position: 403-749
Cow position: chr27:5925144-5925503 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 174

Conread position: 403-749
Cow position: chr27:14297089-14297437 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 90

Conread position: 403-749
Cow position: chr27:15634463-15634112 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 106

Conread position: 403-749
Cow position: chr27:19523837-19523478 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 106

Conread position: 403-749
Cow position: chr27:20810292-20810651 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 176

Conread position: 403-749
Cow position: chr27:25971728-25971371 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 18

Conread position: 403-749
Cow position: chr27:29811202-29811557 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 155

Conread position: 405-740
Cow position: chr27:25965083-25964738 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 120

Conread position: 405-747
Cow position: chr27:6030647-6030994 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 57

Conread position: 405-749
Cow position: chr27:25801332-25800975 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 155

Conread position: 406-700
Cow position: chr27:25873514-25873816 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 126

Conread position: 406-750
Cow position: chr27:1904696-1904372 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 9

Conread position: 410-671
Cow position: chr27:30035693-30035965 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 163

Conread position: 410-740
Cow position: chr27:26855944-26856278 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 83

Conread position: 410-747
Cow position: chr27:15273194-15272840 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 21, 171

Conread position: 413-656
Cow position: chr27:24157085-24157331 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 73

Conread position: 413-724
Cow position: chr27:21342411-21342735 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 138

Conread position: 413-749
Cow position: chr27:3232653-3232304 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 415-625
Cow position: chr27:29447193-29446977 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 145

Conread position: 415-647
Cow position: chr27:22648023-22647783 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 145

Conread position: 415-658
Cow position: chr27:7911866-7912115 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 145

Conread position: 415-710
Cow position: chr27:8960146-8959836 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 145

Conread position: 415-738
Cow position: chr27:12146760-12146422 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 201
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 16, 145

Conread position: 415-740
Cow position: chr27:27045066-27045398 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 145

Conread position: 415-744
Cow position: chr27:3759756-3760093 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 43

Conread position: 415-747
Cow position: chr27:27556691-27557032 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 17, 137

Conread position: 415-749
Cow position: chr27:166034-165689 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 49

Conread position: 415-749
Cow position: chr27:1520563-1520910 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr27:5984147-5983800 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 165

Conread position: 415-749
Cow position: chr27:10578829-10579177 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 318

Conread position: 415-749
Cow position: chr27:15543898-15544245 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr27:16031514-16031167 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 145

Conread position: 415-749
Cow position: chr27:29036486-29036150 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 145

Conread position: 416-737
Cow position: chr27:5991156-5990828 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 28

Conread position: 416-740
Cow position: chr27:21451330-21451665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 5

Conread position: 417-749
Cow position: chr27:8972332-8972674 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 77, 19

Conread position: 421-749
Cow position: chr27:24296378-24296039 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 128

Conread position: 422-740
Cow position: chr27:865501-865844 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 67

Conread position: 429-704
Cow position: chr27:29375231-29374962 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 182, 40

Conread position: 429-736
Cow position: chr27:10282844-10283161 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 123

Conread position: 429-737
Cow position: chr27:31249144-31249460 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 133

Conread position: 429-738
Cow position: chr27:22260475-22260152 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 94

Conread position: 429-742
Cow position: chr27:1188553-1188889 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 313

Conread position: 429-749
Cow position: chr27:13353204-13353536 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 147

Conread position: 429-749
Cow position: chr27:27849168-27849500 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 59, 147

Conread position: 430-737
Cow position: chr27:23318034-23317724 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 39

Conread position: 430-737
Cow position: chr27:24571903-24571587 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 128

Conread position: 431-715
Cow position: chr27:21284329-21284036 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 88

Conread position: 431-732
Cow position: chr27:15405549-15405841 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 73

Conread position: 431-749
Cow position: chr27:13308544-13308874 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 128

Conread position: 443-740
Cow position: chr27:16427576-16427884 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 25

Conread position: 443-749
Cow position: chr27:2558079-2557759 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 135

Conread position: 443-749
Cow position: chr27:27291299-27291619 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 15, 112

Conread position: 448-658
Cow position: chr27:15926002-15925785 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 128

Conread position: 449-737
Cow position: chr27:16038036-16037747 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 38

Conread position: 455-749
Cow position: chr27:22797732-22797427 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 9

Conread position: 456-741
Cow position: chr27:8200863-8201160 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 142

Conread position: 466-749
Cow position: chr27:4768370-4768665 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 112

Conread position: 471-740
Cow position: chr27:526158-525878 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 107

Conread position: 473-750
Cow position: chr27:8297718-8297444 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 190

Conread position: 487-745
Cow position: chr27:3994345-3994082 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 73

Conread position: 494-740
Cow position: chr27:19932595-19932345 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 48

Conread position: 500-749
Cow position: chr27:3990827-3990570 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 74

Conread position: 500-752
Cow position: chr27:19424405-19424144 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 228

Conread position: 510-749
Cow position: chr27:30307285-30307039 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 64

Conread position: 521-749
Cow position: chr27:3653705-3653470 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 41

Conread position: 537-702
Cow position: chr27:17864024-17864188 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 23

Conread position: 555-749
Cow position: chr27:12006177-12006378 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 171

Show alignments to all cow chromosomes.