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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8011J19.5
        

               
Conread position:
               
329-736
               

               
Cow position:
               
chr4:28835099-28835516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
337-749
               

               
Cow position:
               
chr4:15617241-15617660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
290, 389
               

               
Conread position:
               
355-725
               

               
Cow position:
               
chr4:43028560-43028198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
366-652
               

               
Cow position:
               
chr4:28316510-28316802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
369-749
               

               
Cow position:
               
chr4:10424069-10424458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
381-700
               

               
Cow position:
               
chr4:384259-384589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
381-737
               

               
Cow position:
               
chr4:995400-995043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
381-749
               

               
Cow position:
               
chr4:7215188-7214811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
382-550
               

               
Cow position:
               
chr4:43834959-43835125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
388-737
               

               
Cow position:
               
chr4:60625929-60625574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
389-742
               

               
Cow position:
               
chr4:4673982-4673619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr4:54173466-54173730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
390-706
               

               
Cow position:
               
chr4:5579196-5578867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
390-707
               

               
Cow position:
               
chr4:8935210-8935524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
390-740
               

               
Cow position:
               
chr4:46031038-46031393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
390-742
               

               
Cow position:
               
chr4:21973085-21972732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
391-596
               

               
Cow position:
               
chr4:20789164-20789375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
391-728
               

               
Cow position:
               
chr4:18301639-18301295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
391-729
               

               
Cow position:
               
chr4:11105082-11104739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
391-735
               

               
Cow position:
               
chr4:67649455-67649105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr4:22491879-22492229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr4:32000185-32000526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr4:49990254-49989939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr4:21843921-21843554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr4:34176395-34176016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr4:44733223-44733588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr4:58882786-58882419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
393-737
               

               
Cow position:
               
chr4:47720524-47720159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
393-755
               

               
Cow position:
               
chr4:42862788-42863160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
394-740
               

               
Cow position:
               
chr4:44957813-44957454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
394-740
               

               
Cow position:
               
chr4:61952089-61952453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
396-716
               

               
Cow position:
               
chr4:64038850-64039169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
396-749
               

               
Cow position:
               
chr4:1935923-1935555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
396-749
               

               
Cow position:
               
chr4:37702856-37703221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
398-647
               

               
Cow position:
               
chr4:63000739-63000996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
399-647
               

               
Cow position:
               
chr4:50761771-50761522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
399-749
               

               
Cow position:
               
chr4:6000840-6000468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 343
               

               
Conread position:
               
399-749
               

               
Cow position:
               
chr4:67601064-67600702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
400-603
               

               
Cow position:
               
chr4:49002196-49002407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
400-650
               

               
Cow position:
               
chr4:48752869-48753124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
400-668
               

               
Cow position:
               
chr4:11318601-11318854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
400-687
               

               
Cow position:
               
chr4:55519871-55520176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
400-688
               

               
Cow position:
               
chr4:46198657-46198363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
400-705
               

               
Cow position:
               
chr4:36669197-36669503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
400-707
               

               
Cow position:
               
chr4:27539273-27539592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 180
               

               
Conread position:
               
400-713
               

               
Cow position:
               
chr4:4116265-4116577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
400-733
               

               
Cow position:
               
chr4:453368-453697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr4:17471051-17471395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr4:47136263-47136592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr4:65890402-65890747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr4:6168362-6168014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr4:38180370-38180716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 185
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr4:55540241-55539895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 232
               

               
Conread position:
               
400-747
               

               
Cow position:
               
chr4:41190556-41190199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
400-748
               

               
Cow position:
               
chr4:54189395-54189735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:1028616-1028265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 201
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:1239813-1239456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:3284753-3284392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:10045163-10044801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:15874031-15873668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:29530853-29530491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:30507800-30508165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:36026666-36026305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:66174714-66174355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr4:67393831-67394193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
400-750
               

               
Cow position:
               
chr4:1187750-1187387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
400-751
               

               
Cow position:
               
chr4:19206301-19206663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
403-589
               

               
Cow position:
               
chr4:42923587-42923399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
403-608
               

               
Cow position:
               
chr4:7156343-7156130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
403-616
               

               
Cow position:
               
chr4:40437919-40437701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-620
               

               
Cow position:
               
chr4:30578334-30578557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr4:11390878-11390656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr4:33645975-33645759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
403-640
               

               
Cow position:
               
chr4:35001213-35000973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
403-653
               

               
Cow position:
               
chr4:5047923-5047666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
403-660
               

               
Cow position:
               
chr4:19604377-19604637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
403-684
               

               
Cow position:
               
chr4:49827635-49827917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
213, 22
               

               
Conread position:
               
403-695
               

               
Cow position:
               
chr4:22074465-22074161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
403-716
               

               
Cow position:
               
chr4:61596093-61595771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
403-729
               

               
Cow position:
               
chr4:43897100-43896761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr4:33478-33138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr4:26467855-26468185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr4:33070234-33069893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr4:48029469-48029812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:26625983-26625649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:27350643-27350984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:33496168-33496519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 175
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:42103052-42103394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:43317042-43316692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr4:46711989-46711649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
403-742
               

               
Cow position:
               
chr4:5913959-5914285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
403-742
               

               
Cow position:
               
chr4:64875416-64875068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
403-746
               

               
Cow position:
               
chr4:358492-358848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
403-746
               

               
Cow position:
               
chr4:6631704-6631345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr4:27177435-27177792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:3971008-3971355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:6487760-6487401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:8648687-8649043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:12238620-12238268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:17920346-17919988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:18813602-18813244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:23304734-23304375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:27288493-27288138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:27336820-27337178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:29604867-29604508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:31562622-31562265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:35929088-35929448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:36898984-36899342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:41957369-41957727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:57987351-57987711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:61241889-61242247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 177
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:67382894-67383247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr4:67681375-67681011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
403-756
               

               
Cow position:
               
chr4:52695872-52696229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
404-732
               

               
Cow position:
               
chr4:22316337-22316674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
404-737
               

               
Cow position:
               
chr4:45654569-45654218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
404-740
               

               
Cow position:
               
chr4:39840322-39840662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
404-742
               

               
Cow position:
               
chr4:54147800-54147454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
404-749
               

               
Cow position:
               
chr4:20027914-20027555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 152
               

               
Conread position:
               
405-589
               

               
Cow position:
               
chr4:55510225-55510035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
405-616
               

               
Cow position:
               
chr4:54972075-54972291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
405-621
               

               
Cow position:
               
chr4:5486780-5486558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
405-624
               

               
Cow position:
               
chr4:1436884-1436653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
405-625
               

               
Cow position:
               
chr4:62171403-62171622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
405-650
               

               
Cow position:
               
chr4:15814891-15814638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
405-717
               

               
Cow position:
               
chr4:41977036-41976714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
405-735
               

               
Cow position:
               
chr4:18100296-18099953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr4:5611390-5611043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 182
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr4:11108467-11108117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr4:39934006-39934355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr4:65430891-65431238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
405-742
               

               
Cow position:
               
chr4:185758-186100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
405-747
               

               
Cow position:
               
chr4:19236679-19237033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
406-702
               

               
Cow position:
               
chr4:43841362-43841053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
406-705
               

               
Cow position:
               
chr4:64799729-64800036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 150
               

               
Conread position:
               
406-737
               

               
Cow position:
               
chr4:23452403-23452058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 152
               

               
Conread position:
               
409-737
               

               
Cow position:
               
chr4:19523554-19523898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
410-740
               

               
Cow position:
               
chr4:20242770-20243113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
410-740
               

               
Cow position:
               
chr4:26745135-26745475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
410-740
               

               
Cow position:
               
chr4:55669858-55670205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
410-749
               

               
Cow position:
               
chr4:43883708-43884059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
410-749
               

               
Cow position:
               
chr4:60651206-60651559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
410-751
               

               
Cow position:
               
chr4:17834233-17833872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 329
               

               
Conread position:
               
413-749
               

               
Cow position:
               
chr4:33021015-33020666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
414-749
               

               
Cow position:
               
chr4:47751945-47752297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 145
               

               
Conread position:
               
415-620
               

               
Cow position:
               
chr4:62557949-62557738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
415-625
               

               
Cow position:
               
chr4:13464432-13464647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-647
               

               
Cow position:
               
chr4:532664-532904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
415-647
               

               
Cow position:
               
chr4:30474053-30474293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-700
               

               
Cow position:
               
chr4:16061915-16062207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:606230-606571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:1047632-1047298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:3069541-3069883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:3128434-3128781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:4418668-4419012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:6266594-6266248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:6547654-6548001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:6863612-6863265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:7779019-7779366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:9040565-9040912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:9356857-9357204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:10884258-10884606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:16362821-16363166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:17033882-17033535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:17234646-17234987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:17876588-17876923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:18266711-18267058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:18336338-18335984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:20657441-20657095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:21298162-21297815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:21341692-21342039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:27518753-27518406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:27881511-27881858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:27891692-27892039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:31485363-31485016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:40697848-40697501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:41473211-41472864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:47055807-47055460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:47263395-47263743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:48732296-48732642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:54931980-54931640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:58291360-58291707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr4:62907402-62907056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-754
               

               
Cow position:
               
chr4:3169900-3170253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
416-743
               

               
Cow position:
               
chr4:3449416-3449757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
417-749
               

               
Cow position:
               
chr4:25596864-25596519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
421-737
               

               
Cow position:
               
chr4:4379016-4379338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
424-749
               

               
Cow position:
               
chr4:62222784-62223111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
426-750
               

               
Cow position:
               
chr4:17586501-17586169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
427-740
               

               
Cow position:
               
chr4:3474328-3474633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
427-740
               

               
Cow position:
               
chr4:23646574-23646249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 132
               

               
Conread position:
               
428-704
               

               
Cow position:
               
chr4:19254361-19254644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
428-737
               

               
Cow position:
               
chr4:23544194-23544506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr4:54811228-54810881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
429-713
               

               
Cow position:
               
chr4:38931997-38932291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:9005098-9004766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:17821164-17821496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:18004349-18004680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:18096978-18096644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:32214788-32215120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:37785936-37786268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 296
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:40217472-40217804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:41961531-41961862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:44778559-44778226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr4:55272788-55273118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
429-756
               

               
Cow position:
               
chr4:8677436-8677774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
430-740
               

               
Cow position:
               
chr4:26911416-26911738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
431-756
               

               
Cow position:
               
chr4:27293249-27292915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
432-616
               

               
Cow position:
               
chr4:24021826-24021640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
432-740
               

               
Cow position:
               
chr4:9820786-9821103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
433-737
               

               
Cow position:
               
chr4:29093417-29093097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
434-625
               

               
Cow position:
               
chr4:9796948-9796753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
434-752
               

               
Cow position:
               
chr4:42331082-42330752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
436-747
               

               
Cow position:
               
chr4:12606224-12605906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
437-749
               

               
Cow position:
               
chr4:43236453-43236135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
442-693
               

               
Cow position:
               
chr4:49768910-49769174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
443-733
               

               
Cow position:
               
chr4:12840598-12840891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
443-740
               

               
Cow position:
               
chr4:39645403-39645709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
443-740
               

               
Cow position:
               
chr4:65843241-65842936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
443-747
               

               
Cow position:
               
chr4:25971613-25971918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 136
               

               
Conread position:
               
444-740
               

               
Cow position:
               
chr4:38909159-38909457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
444-749
               

               
Cow position:
               
chr4:34712468-34712783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
445-747
               

               
Cow position:
               
chr4:45954336-45954649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
446-751
               

               
Cow position:
               
chr4:21504445-21504153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
446-751
               

               
Cow position:
               
chr4:65207805-65207490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
447-745
               

               
Cow position:
               
chr4:1257678-1257991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
447-749
               

               
Cow position:
               
chr4:26886271-26885957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
449-694
               

               
Cow position:
               
chr4:65345613-65345356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
449-736
               

               
Cow position:
               
chr4:2264057-2263756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
450-749
               

               
Cow position:
               
chr4:14918713-14919023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
450-749
               

               
Cow position:
               
chr4:23525242-23525547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
453-740
               

               
Cow position:
               
chr4:38583539-38583838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
454-624
               

               
Cow position:
               
chr4:23889708-23889530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
454-737
               

               
Cow position:
               
chr4:8818444-8818720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
454-740
               

               
Cow position:
               
chr4:7582881-7583167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
456-740
               

               
Cow position:
               
chr4:44647089-44646791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
459-644
               

               
Cow position:
               
chr4:5005544-5005738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
460-750
               

               
Cow position:
               
chr4:10541566-10541266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
468-749
               

               
Cow position:
               
chr4:1927962-1927669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
468-751
               

               
Cow position:
               
chr4:10135528-10135234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
471-749
               

               
Cow position:
               
chr4:33831754-33831464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
474-737
               

               
Cow position:
               
chr4:7422993-7423268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
482-749
               

               
Cow position:
               
chr4:38153611-38153338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
483-734
               

               
Cow position:
               
chr4:62161482-62161222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
487-724
               

               
Cow position:
               
chr4:25823315-25823068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
487-749
               

               
Cow position:
               
chr4:35144849-35144579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
491-749
               

               
Cow position:
               
chr4:4086661-4086398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
494-749
               

               
Cow position:
               
chr4:60855463-60855726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
494-749
               

               
Cow position:
               
chr4:65581218-65581481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
499-707
               

               
Cow position:
               
chr4:4463657-4463875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
499-733
               

               
Cow position:
               
chr4:56302863-56303104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
499-740
               

               
Cow position:
               
chr4:5574892-5575144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
501-737
               

               
Cow position:
               
chr4:9712443-9712679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
509-733
               

               
Cow position:
               
chr4:23049201-23048961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
510-749
               

               
Cow position:
               
chr4:19736745-19736992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
510-749
               

               
Cow position:
               
chr4:30540948-30540701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
511-737
               

               
Cow position:
               
chr4:23150937-23150703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
512-749
               

               
Cow position:
               
chr4:65199080-65198835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
517-749
               

               
Cow position:
               
chr4:18330812-18331052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
519-740
               

               
Cow position:
               
chr4:15463698-15463469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
522-740
               

               
Cow position:
               
chr4:3355206-3354980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
527-749
               

               
Cow position:
               
chr4:48496413-48496643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
529-749
               

               
Cow position:
               
chr4:54099015-54098789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
533-695
               

               
Cow position:
               
chr4:45470884-45471052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
534-740
               

               
Cow position:
               
chr4:47928919-47929131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
536-722
               

               
Cow position:
               
chr4:27553578-27553773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
539-700
               

               
Cow position:
               
chr4:64811114-64810947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
540-696
               

               
Cow position:
               
chr4:1528506-1528341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
540-740
               

               
Cow position:
               
chr4:57429682-57429478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
555-749
               

               
Cow position:
               
chr4:2226999-2226797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 172
               

               
Conread position:
               
555-749
               

               
Cow position:
               
chr4:33629267-33629066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
556-749
               

               
Cow position:
               
chr4:10122180-10122372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
559-749
               

               
Cow position:
               
chr4:36754554-36754751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 167
               

               
Conread position:
               
587-740
               

               
Cow position:
               
chr4:20789594-20789752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
605-740
               

               
Cow position:
               
chr4:50837901-50838037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 115
               
Show alignments to all cow chromosomes.