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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8011J19.5
        

               
Conread position:
               
338-653
               

               
Cow position:
               
chr6:8279978-8279662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
345-707
               

               
Cow position:
               
chr6:11354373-11354013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
363-568
               

               
Cow position:
               
chr6:23013486-23013278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
381-645
               

               
Cow position:
               
chr6:1096907-1096643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
381-733
               

               
Cow position:
               
chr6:41676763-41677123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
381-749
               

               
Cow position:
               
chr6:60876126-60876501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
382-741
               

               
Cow position:
               
chr6:6121527-6121171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
382-749
               

               
Cow position:
               
chr6:28171731-28172116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
389-705
               

               
Cow position:
               
chr6:36962626-36962304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
389-740
               

               
Cow position:
               
chr6:40550863-40550504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
389-749
               

               
Cow position:
               
chr6:3485563-3485214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
389-751
               

               
Cow position:
               
chr6:16703896-16703536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
390-740
               

               
Cow position:
               
chr6:58952286-58951928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
391-585
               

               
Cow position:
               
chr6:9756781-9756587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr6:14851910-14851553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
391-737
               

               
Cow position:
               
chr6:39912161-39912517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-740
               

               
Cow position:
               
chr6:6162966-6163326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
391-740
               

               
Cow position:
               
chr6:15784137-15783785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-740
               

               
Cow position:
               
chr6:41414506-41414149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
391-740
               

               
Cow position:
               
chr6:44017991-44017632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-742
               

               
Cow position:
               
chr6:43798076-43797703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-747
               

               
Cow position:
               
chr6:65930080-65930461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr6:328524-328158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
391-749
               

               
Cow position:
               
chr6:43087756-43087391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
391-753
               

               
Cow position:
               
chr6:50121091-50120717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
392-588
               

               
Cow position:
               
chr6:66954128-66953925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
393-740
               

               
Cow position:
               
chr6:3119706-3119347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
393-747
               

               
Cow position:
               
chr6:3152059-3152421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
393-748
               

               
Cow position:
               
chr6:28550225-28549850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
395-742
               

               
Cow position:
               
chr6:31529265-31529622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
396-693
               

               
Cow position:
               
chr6:11746211-11746513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
396-715
               

               
Cow position:
               
chr6:64812876-64812555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
396-716
               

               
Cow position:
               
chr6:17927263-17927597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
396-735
               

               
Cow position:
               
chr6:18751350-18751017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
396-737
               

               
Cow position:
               
chr6:12514357-12514685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
396-740
               

               
Cow position:
               
chr6:31009969-31009622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
398-725
               

               
Cow position:
               
chr6:63598528-63598868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
398-751
               

               
Cow position:
               
chr6:43103199-43102856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
399-749
               

               
Cow position:
               
chr6:8205034-8205393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
399-749
               

               
Cow position:
               
chr6:8536454-8536090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
6, 334
               

               
Conread position:
               
399-749
               

               
Cow position:
               
chr6:41408247-41408610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
400-553
               

               
Cow position:
               
chr6:35824684-35824845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
400-624
               

               
Cow position:
               
chr6:237032-236803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 154
               

               
Conread position:
               
400-625
               

               
Cow position:
               
chr6:33902903-33902683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
400-647
               

               
Cow position:
               
chr6:1275146-1274892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 176
               

               
Conread position:
               
400-656
               

               
Cow position:
               
chr6:15031013-15030747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
400-705
               

               
Cow position:
               
chr6:6159501-6159820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
400-707
               

               
Cow position:
               
chr6:7161628-7161941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
400-714
               

               
Cow position:
               
chr6:52696481-52696803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr6:9734120-9733777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr6:14147046-14147392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
400-737
               

               
Cow position:
               
chr6:53772905-53773254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
400-738
               

               
Cow position:
               
chr6:10365404-10365064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr6:14305469-14305820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr6:24242134-24242485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
400-740
               

               
Cow position:
               
chr6:48122366-48122708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
400-747
               

               
Cow position:
               
chr6:41050841-41051196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
400-747
               

               
Cow position:
               
chr6:65867630-65867987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr6:3927989-3928342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 189
               

               
Conread position:
               
400-749
               

               
Cow position:
               
chr6:62852429-62852774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chr6:67267115-67267276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
403-615
               

               
Cow position:
               
chr6:66511354-66511571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr6:14264688-14264910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 161
               

               
Conread position:
               
403-625
               

               
Cow position:
               
chr6:61179383-61179159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-628
               

               
Cow position:
               
chr6:66277286-66277518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
403-643
               

               
Cow position:
               
chr6:6165490-6165735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
403-653
               

               
Cow position:
               
chr6:1262728-1262986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-653
               

               
Cow position:
               
chr6:43778365-43778623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
403-653
               

               
Cow position:
               
chr6:55902068-55902327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
403-707
               

               
Cow position:
               
chr6:1888591-1888273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
403-716
               

               
Cow position:
               
chr6:63405657-63405984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
403-724
               

               
Cow position:
               
chr6:1380611-1380277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
403-725
               

               
Cow position:
               
chr6:6439655-6439981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
403-735
               

               
Cow position:
               
chr6:9840284-9839944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
403-736
               

               
Cow position:
               
chr6:52190137-52189796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:916889-917236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:2581259-2581594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:28103019-28102675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:30317095-30316748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:33950306-33949968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:36531127-36531466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:39956908-39957262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
403-737
               

               
Cow position:
               
chr6:40158668-40158323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:182694-182345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:3886660-3886309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:7940943-7940592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:24632401-24632049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:27475258-27475607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:37385996-37386341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:40864186-40863833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 174
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:44950614-44950264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:53418327-53418675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:53935786-53935438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:61056518-61056185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 212
               

               
Conread position:
               
403-740
               

               
Cow position:
               
chr6:64719164-64719514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
403-742
               

               
Cow position:
               
chr6:51732928-51733279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
403-746
               

               
Cow position:
               
chr6:6720828-6721172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
403-746
               

               
Cow position:
               
chr6:35883418-35883775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr6:16592811-16593162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr6:25790853-25790496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr6:39331684-39331328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr6:39999611-39999254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr6:40975032-40975389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:478397-478755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:3272634-3272277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 328
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:5946929-5946570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:6182860-6182503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:10236044-10236401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 326
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:15138320-15137968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:17049217-17049578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 331
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:30270057-30269698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:34493521-34493880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:34504675-34504316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:34843867-34843508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:35417107-35416767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:38873812-38873456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:41231333-41231693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 158
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:42615945-42616302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:43790732-43790371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:48875485-48875135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:50485927-50485579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:50571034-50571396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 158
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:53543632-53543278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:55539424-55539066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 156
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:55592902-55593275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:60332189-60332548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
403-749
               

               
Cow position:
               
chr6:65875435-65875079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 156
               

               
Conread position:
               
403-751
               

               
Cow position:
               
chr6:4904139-4903789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr6:10611673-10612037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
403-756
               

               
Cow position:
               
chr6:30077436-30077073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
403-756
               

               
Cow position:
               
chr6:49165756-49165387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
404-726
               

               
Cow position:
               
chr6:62487622-62487297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
404-740
               

               
Cow position:
               
chr6:12628749-12629098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 282
               

               
Conread position:
               
404-740
               

               
Cow position:
               
chr6:55474154-55474502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
405-625
               

               
Cow position:
               
chr6:51876672-51876896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
405-627
               

               
Cow position:
               
chr6:3685800-3686027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
405-628
               

               
Cow position:
               
chr6:66548322-66548546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
405-707
               

               
Cow position:
               
chr6:11829790-11829467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
405-737
               

               
Cow position:
               
chr6:6120131-6119796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr6:24045824-24045478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr6:35724243-35724581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr6:59618917-59619272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
405-740
               

               
Cow position:
               
chr6:60167702-60167362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
405-742
               

               
Cow position:
               
chr6:12647086-12647426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
405-747
               

               
Cow position:
               
chr6:59596110-59596446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
405-749
               

               
Cow position:
               
chr6:1536553-1536910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
405-756
               

               
Cow position:
               
chr6:44509911-44510274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
406-749
               

               
Cow position:
               
chr6:15924740-15924390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
409-700
               

               
Cow position:
               
chr6:12351680-12351990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
409-737
               

               
Cow position:
               
chr6:32418364-32418707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
409-749
               

               
Cow position:
               
chr6:16050437-16050088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
409-750
               

               
Cow position:
               
chr6:3573649-3573997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
410-740
               

               
Cow position:
               
chr6:16766983-16766644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
410-749
               

               
Cow position:
               
chr6:15276386-15276035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
23, 169
               

               
Conread position:
               
410-749
               

               
Cow position:
               
chr6:47040356-47040004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
410-752
               

               
Cow position:
               
chr6:21975806-21976159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
412-749
               

               
Cow position:
               
chr6:17121243-17121591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
413-752
               

               
Cow position:
               
chr6:26772265-26771913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
414-722
               

               
Cow position:
               
chr6:15153969-15154289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
414-737
               

               
Cow position:
               
chr6:43666700-43666372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
414-749
               

               
Cow position:
               
chr6:43186962-43187314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
414-749
               

               
Cow position:
               
chr6:45724288-45723940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
415-643
               

               
Cow position:
               
chr6:1402670-1402435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
415-643
               

               
Cow position:
               
chr6:1407258-1407023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
415-647
               

               
Cow position:
               
chr6:22679713-22679953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-647
               

               
Cow position:
               
chr6:41389588-41389358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
415-647
               

               
Cow position:
               
chr6:45591406-45591646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-650
               

               
Cow position:
               
chr6:8755959-8755716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 164
               

               
Conread position:
               
415-653
               

               
Cow position:
               
chr6:25217815-25218057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
415-707
               

               
Cow position:
               
chr6:1818941-1818635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
415-735
               

               
Cow position:
               
chr6:34129316-34129648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
415-737
               

               
Cow position:
               
chr6:16418827-16418489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
415-737
               

               
Cow position:
               
chr6:58605389-58605724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
415-738
               

               
Cow position:
               
chr6:50720956-50721290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
415-740
               

               
Cow position:
               
chr6:57181678-57182014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-747
               

               
Cow position:
               
chr6:28185472-28185116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-748
               

               
Cow position:
               
chr6:19104050-19103704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
415-748
               

               
Cow position:
               
chr6:26325341-26324995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-748
               

               
Cow position:
               
chr6:44147089-44146743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:127274-126927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:888415-888762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:2876173-2875829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:6556819-6557166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:7138482-7138136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:9234370-9234716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:10044073-10044420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:11289598-11289261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:11722337-11722003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:14928317-14928664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:17595427-17595080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 317
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:19713376-19713029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:20351231-20350884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:22044150-22043803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:22737849-22737501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:25375236-25374903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:27151582-27151236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:28064849-28065196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:28488710-28488373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:31913317-31912970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:33490196-33489849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:36230668-36230321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:38932396-38932049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:40277917-40278264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:41192181-41192531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:43620589-43620936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:45937156-45937496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:46947677-46948023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:49826394-49826047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:51867853-51868194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:52301599-52301947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:56452237-56451890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:60379021-60379368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:61829087-61829434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:62664633-62664980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-749
               

               
Cow position:
               
chr6:66188942-66188595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-752
               

               
Cow position:
               
chr6:1507652-1507302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
415-752
               

               
Cow position:
               
chr6:26668165-26667816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
415-756
               

               
Cow position:
               
chr6:7467792-7467438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
416-707
               

               
Cow position:
               
chr6:62577323-62577017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
417-740
               

               
Cow position:
               
chr6:33465821-33466154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
417-749
               

               
Cow position:
               
chr6:58030641-58030982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
420-738
               

               
Cow position:
               
chr6:48466200-48466513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
421-740
               

               
Cow position:
               
chr6:51717421-51717751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 137
               

               
Conread position:
               
421-749
               

               
Cow position:
               
chr6:32419817-32420155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
423-743
               

               
Cow position:
               
chr6:53462289-53461952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
426-749
               

               
Cow position:
               
chr6:11168376-11168712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 158
               

               
Conread position:
               
428-736
               

               
Cow position:
               
chr6:24584504-24584187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr6:1498073-1498403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
428-749
               

               
Cow position:
               
chr6:10650911-10650588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
429-616
               

               
Cow position:
               
chr6:9586938-9587130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-625
               

               
Cow position:
               
chr6:4467484-4467685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
429-694
               

               
Cow position:
               
chr6:27761575-27761854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-730
               

               
Cow position:
               
chr6:14498073-14497769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 180
               

               
Conread position:
               
429-737
               

               
Cow position:
               
chr6:7048875-7049200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 155
               

               
Conread position:
               
429-737
               

               
Cow position:
               
chr6:9738384-9738061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
429-738
               

               
Cow position:
               
chr6:33470179-33470472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
429-740
               

               
Cow position:
               
chr6:18520209-18519886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-740
               

               
Cow position:
               
chr6:18571705-18571388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 296
               

               
Conread position:
               
429-740
               

               
Cow position:
               
chr6:42266612-42266929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
429-742
               

               
Cow position:
               
chr6:14143906-14144220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
429-742
               

               
Cow position:
               
chr6:34074736-34075066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
429-747
               

               
Cow position:
               
chr6:65819707-65819377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:48699-48367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 149
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:12663442-12663110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:20553368-20553036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:27172703-27173034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:28160282-28160614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:39897823-39898155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:51149815-51150147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:55238569-55238895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:57521047-57521380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 303
               

               
Conread position:
               
429-749
               

               
Cow position:
               
chr6:68030052-68030384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
429-753
               

               
Cow position:
               
chr6:11019530-11019866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
430-570
               

               
Cow position:
               
chr6:67098189-67098333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
431-749
               

               
Cow position:
               
chr6:2543604-2543940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
433-742
               

               
Cow position:
               
chr6:55945548-55945228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
434-737
               

               
Cow position:
               
chr6:365769-366078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
434-737
               

               
Cow position:
               
chr6:27341479-27341792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
434-737
               

               
Cow position:
               
chr6:43330540-43330226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 119
               

               
Conread position:
               
435-751
               

               
Cow position:
               
chr6:46218569-46218899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
443-738
               

               
Cow position:
               
chr6:37387465-37387772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
443-749
               

               
Cow position:
               
chr6:27527067-27526758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
444-737
               

               
Cow position:
               
chr6:529998-529696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
96, 105
               

               
Conread position:
               
445-714
               

               
Cow position:
               
chr6:65049770-65049493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
445-749
               

               
Cow position:
               
chr6:2452737-2453051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
446-749
               

               
Cow position:
               
chr6:11870044-11869729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
446-749
               

               
Cow position:
               
chr6:67553123-67553437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
447-717
               

               
Cow position:
               
chr6:68912510-68912227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
447-747
               

               
Cow position:
               
chr6:618307-618617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
447-749
               

               
Cow position:
               
chr6:47024931-47025242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
449-749
               

               
Cow position:
               
chr6:43049302-43048990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
450-703
               

               
Cow position:
               
chr6:61065494-61065753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
451-749
               

               
Cow position:
               
chr6:30033535-30033831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
195, 55
               

               
Conread position:
               
453-749
               

               
Cow position:
               
chr6:20450857-20451165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
454-740
               

               
Cow position:
               
chr6:47849002-47848712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
455-749
               

               
Cow position:
               
chr6:705905-706203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
455-749
               

               
Cow position:
               
chr6:31940766-31941072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
459-737
               

               
Cow position:
               
chr6:52245416-52245701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
464-736
               

               
Cow position:
               
chr6:62414213-62414500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
467-749
               

               
Cow position:
               
chr6:67173466-67173760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
468-740
               

               
Cow position:
               
chr6:18970515-18970244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 75
               

               
Conread position:
               
471-670
               

               
Cow position:
               
chr6:43993235-43993438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
484-749
               

               
Cow position:
               
chr6:17112233-17111960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
484-749
               

               
Cow position:
               
chr6:17386455-17386728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
485-749
               

               
Cow position:
               
chr6:11453935-11453663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
487-711
               

               
Cow position:
               
chr6:37866235-37866468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
487-729
               

               
Cow position:
               
chr6:47150034-47149785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
487-733
               

               
Cow position:
               
chr6:52978220-52977969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
487-737
               

               
Cow position:
               
chr6:20611768-20611515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
487-747
               

               
Cow position:
               
chr6:67211653-67211384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
487-749
               

               
Cow position:
               
chr6:1105214-1104947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
487-749
               

               
Cow position:
               
chr6:12997357-12997626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
487-749
               

               
Cow position:
               
chr6:33809499-33809229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
493-737
               

               
Cow position:
               
chr6:45279878-45280130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
493-750
               

               
Cow position:
               
chr6:29283212-29283478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr6:58597321-58597073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
499-740
               

               
Cow position:
               
chr6:50113637-50113878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
509-737
               

               
Cow position:
               
chr6:2087478-2087715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
509-737
               

               
Cow position:
               
chr6:57302569-57302802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
510-695
               

               
Cow position:
               
chr6:15261224-15261416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
510-695
               

               
Cow position:
               
chr6:15262269-15262461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
510-749
               

               
Cow position:
               
chr6:1796585-1796832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
511-749
               

               
Cow position:
               
chr6:2186823-2186577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
516-748
               

               
Cow position:
               
chr6:7112969-7112731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
517-749
               

               
Cow position:
               
chr6:67448961-67448721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
523-749
               

               
Cow position:
               
chr6:63177014-63177248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
528-737
               

               
Cow position:
               
chr6:31304008-31304214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
530-737
               

               
Cow position:
               
chr6:7921057-7920841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
538-740
               

               
Cow position:
               
chr6:22805853-22805650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
538-742
               

               
Cow position:
               
chr6:13405217-13405426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
541-749
               

               
Cow position:
               
chr6:21711695-21711911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
544-742
               

               
Cow position:
               
chr6:31624809-31625005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
545-750
               

               
Cow position:
               
chr6:47614837-47614631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
552-749
               

               
Cow position:
               
chr6:13850739-13850943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 174
               

               
Conread position:
               
553-740
               

               
Cow position:
               
chr6:6492349-6492158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
553-740
               

               
Cow position:
               
chr6:40813367-40813561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 173
               

               
Conread position:
               
555-749
               

               
Cow position:
               
chr6:843824-843623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
555-749
               

               
Cow position:
               
chr6:6034793-6034592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
555-749
               

               
Cow position:
               
chr6:21857361-21857160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
558-740
               

               
Cow position:
               
chr6:45497553-45497366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
559-749
               

               
Cow position:
               
chr6:23568585-23568388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
561-751
               

               
Cow position:
               
chr6:34017998-34017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 14
               
Show alignments to all cow chromosomes.