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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8012H18.3
        

               
Conread position:
               
1-198
               

               
Cow position:
               
chr13:6060967-6060770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr13:48037665-48037859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:24155586-24155784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:25926833-25927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr13:37592898-37592740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr13:14927279-14927466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr13:40722664-40722468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:18166777-18166974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:26383196-26382987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:33517879-33517680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:37381846-37382055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 107
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:38278091-38277893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:55295579-55295382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:17622325-17622529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:27027730-27027524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr13:15110364-15110501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chr13:2404784-2404930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
3-149
               

               
Cow position:
               
chr13:22025664-22025521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr13:15991186-15991030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr13:11147347-11147504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr13:19223690-19223847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr13:51015142-51014982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr13:20839608-20839781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr13:563098-562918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr13:7059512-7059698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr13:21039557-21039375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr13:33054350-33054170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr13:54237399-54237574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr13:20649939-20649754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr13:54093789-54093972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr13:18551489-18551683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr13:17815813-17816007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr13:34556292-34556096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr13:43184827-43184635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
156, 103
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr13:51821845-51821649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr13:12977610-12977800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr13:15869167-15869357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr13:38329671-38329869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr13:23856257-23856455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:1779872-1780075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:5091621-5091420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:25261765-25261566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:42200664-42200859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:8607473-8607277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:12614300-12614502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:15974657-15974852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:33875711-33875904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:38012400-38012603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:42114063-42114263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr13:47756414-47756617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:2414073-2414268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:12989888-12990088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:17292088-17291888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:17800118-17800315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:23167052-23166854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr13:34941607-34941414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:971848-971654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:1042921-1042712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:1231691-1231892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:6153738-6153535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:6616707-6616504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:12448950-12448746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:12546866-12546663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:13306140-13306350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:14544162-14544366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:15041429-15041228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:15872491-15872693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:16269968-16270179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:16343731-16343930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:17021684-17021476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:17855418-17855618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:17993974-17994170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:19178319-19178520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:20563040-20563242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:20814236-20814036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:20816357-20816557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:21155448-21155245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:21235641-21235441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:21275902-21276099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:22115751-22115947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:24539536-24539739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:25531743-25531548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:25695726-25695524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:26261754-26261550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:26698061-26697860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:27525220-27525018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:30651222-30651419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:30793861-30794065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:32017481-32017279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:34507921-34508120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:35659798-35659997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:38484876-38485074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:40651979-40652177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:41806820-41807019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:45353088-45353286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:51940781-51940973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:52283958-52284153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:54381892-54381691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:60599896-60599698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:60690682-60690475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr13:61170675-61170472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:311475-311675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:3315633-3315428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:5279142-5278943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:6079374-6079174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:16292586-16292791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:17158830-17158621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:17613388-17613591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:18835237-18835431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:19023798-19023594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:19555803-19555997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:20666340-20666143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:21708230-21708426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:23270167-23269968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:37517092-37516891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:42860527-42860325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:43595064-43594871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:45023167-45022963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:52284853-52285060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:54344815-54345022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:54418274-54418477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr13:60430030-60429834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr13:55674164-55673957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:24776327-24776543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr13:12282879-12283088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr13:8652393-8652236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr13:20041922-20041717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr13:6606977-6606776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr13:15740109-15740310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr13:34035406-34035612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
6-171
               

               
Cow position:
               
chr13:60340855-60341025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr13:25062456-25062653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr13:46181839-46182027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr13:37069397-37069617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr13:6086853-6086657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chr13:43139176-43138988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
9-204
               

               
Cow position:
               
chr13:4037930-4038124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
9-204
               

               
Cow position:
               
chr13:15446093-15446290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr13:20606063-20605874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr13:40943297-40943462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr13:6975740-6975575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr13:17439717-17439539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr13:57323507-57323681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
11-189
               

               
Cow position:
               
chr13:43480110-43480290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr13:9884821-9884999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr13:24369635-24369819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr13:44322953-44323143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr13:15884967-15884773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr13:20820783-20820599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr13:56148586-56148781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 170
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr13:56160381-56160186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 170
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr13:9587536-9587340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr13:21288033-21287846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr13:23960760-23960562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr13:24753933-24754128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr13:37484221-37484026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr13:17970975-17970790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr13:28683415-28683603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr13:52585969-52585776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr13:52922145-52922333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr13:21209914-21210103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
12-202
               

               
Cow position:
               
chr13:45604369-45604176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr13:15288875-15288683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr13:24376543-24376733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:7257450-7257645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:8201431-8201241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:11460679-11460867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:20784642-20784832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:38283932-38283740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr13:54702241-54702434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:3701492-3701677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:13501568-13501377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:15172357-15172162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:21242038-21241847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:30693759-30693946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr13:57494134-57493939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
13-204
               

               
Cow position:
               
chr13:34281731-34281924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr13:23479083-23479273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr13:24715299-24715481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr13:53566651-53566840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chr13:47216201-47216008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr13:19882978-19882793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr13:20706148-20705960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr13:43194233-43194418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr13:12408232-12408040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr13:12670388-12670201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr13:32949953-32949759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr13:46525388-46525193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr13:1011385-1011577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr13:8362696-8362501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr13:20879775-20879590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
19-184
               

               
Cow position:
               
chr13:4464062-4464231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
19-205
               

               
Cow position:
               
chr13:61166398-61166212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
20-204
               

               
Cow position:
               
chr13:60436824-60436639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr13:24373459-24373649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
25-204
               

               
Cow position:
               
chr13:26098216-26098386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
25-205
               

               
Cow position:
               
chr13:49283277-49283098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
40-204
               

               
Cow position:
               
chr13:33352283-33352123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
42-205
               

               
Cow position:
               
chr13:21524509-21524670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
56-202
               

               
Cow position:
               
chr13:25453264-25453412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
74-204
               

               
Cow position:
               
chr13:36264081-36264208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
103-204
               

               
Cow position:
               
chr13:24729091-24729192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.