Cow genome map

Conread name: Ss1.1-Pig4-TMW8012H18.3

Conread position: 1-201
Cow position: chr6:52248149-52248349 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 63

Conread position: 1-204
Cow position: chr6:40032174-40031975 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 58, 11

Conread position: 2-202
Cow position: chr6:5673222-5673012 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 2-202
Cow position: chr6:46860187-46860384 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 28

Conread position: 2-203
Cow position: chr6:56843135-56842942 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 14

Conread position: 2-204
Cow position: chr6:4383467-4383274 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 62

Conread position: 2-204
Cow position: chr6:20605917-20605715 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 48

Conread position: 2-204
Cow position: chr6:51835379-51835181 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 92

Conread position: 2-204
Cow position: chr6:53178619-53178421 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 9

Conread position: 2-204
Cow position: chr6:55282306-55282508 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 48

Conread position: 2-204
Cow position: chr6:61113738-61113531 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 2-204
Cow position: chr6:66303861-66304060 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 81

Conread position: 3-148
Cow position: chr6:12542953-12543095 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 93

Conread position: 3-150
Cow position: chr6:44984310-44984162 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 99

Conread position: 3-159
Cow position: chr6:60819496-60819342 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 47

Conread position: 3-159
Cow position: chr6:61137354-61137198 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 72, 47

Conread position: 3-171
Cow position: chr6:53519643-53519809 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 78

Conread position: 3-180
Cow position: chr6:416079-415901 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 171

Conread position: 3-180
Cow position: chr6:16423679-16423504 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 11

Conread position: 3-184
Cow position: chr6:8788057-8788236 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 86

Conread position: 3-184
Cow position: chr6:33277023-33276840 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 75

Conread position: 3-187
Cow position: chr6:15937871-15938054 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 74

Conread position: 3-188
Cow position: chr6:66131286-66131105 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 96

Conread position: 3-190
Cow position: chr6:20157311-20157120 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 79

Conread position: 3-191
Cow position: chr6:6098303-6098488 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 62

Conread position: 3-193
Cow position: chr6:54864690-54864874 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 94

Conread position: 3-195
Cow position: chr6:58732326-58732524 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-196
Cow position: chr6:53138941-53139140 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 47

Conread position: 3-198
Cow position: chr6:37149168-37148985 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 82

Conread position: 3-198
Cow position: chr6:62925017-62925208 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 47

Conread position: 3-199
Cow position: chr6:59620649-59620455 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 23

Conread position: 3-200
Cow position: chr6:14201681-14201483 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 54

Conread position: 3-200
Cow position: chr6:30786175-30786363 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 51

Conread position: 3-200
Cow position: chr6:60350315-60350514 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 61

Conread position: 3-200
Cow position: chr6:61130497-61130697 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 47

Conread position: 3-202
Cow position: chr6:2012999-2012802 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 28

Conread position: 3-202
Cow position: chr6:8966071-8965873 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 47

Conread position: 3-202
Cow position: chr6:14958365-14958565 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 61

Conread position: 3-202
Cow position: chr6:21110945-21110752 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 47

Conread position: 3-202
Cow position: chr6:28483000-28482798 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 47

Conread position: 3-202
Cow position: chr6:38207511-38207712 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 47

Conread position: 3-202
Cow position: chr6:49685564-49685368 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 68

Conread position: 3-202
Cow position: chr6:51674893-51674701 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 72

Conread position: 3-202
Cow position: chr6:60442399-60442202 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 94

Conread position: 3-203
Cow position: chr6:242790-242596 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 92

Conread position: 3-203
Cow position: chr6:3978682-3978881 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 77

Conread position: 3-203
Cow position: chr6:8804550-8804745 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 47

Conread position: 3-203
Cow position: chr6:47540511-47540308 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 48, 30

Conread position: 3-204
Cow position: chr6:389150-388952 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 47

Conread position: 3-204
Cow position: chr6:642584-642796 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 3-204
Cow position: chr6:1783797-1783991 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 76

Conread position: 3-204
Cow position: chr6:2607595-2607394 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 47

Conread position: 3-204
Cow position: chr6:3952498-3952306 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 47

Conread position: 3-204
Cow position: chr6:7103249-7103454 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 197

Conread position: 3-204
Cow position: chr6:7694368-7694572 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 48, 142

Conread position: 3-204
Cow position: chr6:8562700-8562497 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 47

Conread position: 3-204
Cow position: chr6:15242812-15242617 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 33

Conread position: 3-204
Cow position: chr6:16411171-16410977 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 47

Conread position: 3-204
Cow position: chr6:16700245-16700040 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 99

Conread position: 3-204
Cow position: chr6:16738000-16737802 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 93

Conread position: 3-204
Cow position: chr6:17090579-17090380 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 167

Conread position: 3-204
Cow position: chr6:21311768-21311977 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 3-204
Cow position: chr6:21542300-21542101 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 47

Conread position: 3-204
Cow position: chr6:31526023-31525830 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 158, 47

Conread position: 3-204
Cow position: chr6:31535591-31535789 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 30

Conread position: 3-204
Cow position: chr6:34196170-34196367 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 47

Conread position: 3-204
Cow position: chr6:35181280-35181472 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 14

Conread position: 3-204
Cow position: chr6:35471539-35471745 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 45

Conread position: 3-204
Cow position: chr6:40713520-40713718 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 84

Conread position: 3-204
Cow position: chr6:42961381-42961586 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 16

Conread position: 3-204
Cow position: chr6:44099067-44098866 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 96

Conread position: 3-204
Cow position: chr6:48572903-48573101 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 34

Conread position: 3-204
Cow position: chr6:50119806-50120006 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 29

Conread position: 3-204
Cow position: chr6:50746967-50746762 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 147

Conread position: 3-204
Cow position: chr6:52478434-52478646 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 47

Conread position: 3-204
Cow position: chr6:54430806-54430600 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 3-204
Cow position: chr6:54647541-54647741 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 118

Conread position: 3-204
Cow position: chr6:54867494-54867292 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 86

Conread position: 3-204
Cow position: chr6:54884930-54885132 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 96

Conread position: 3-204
Cow position: chr6:60859318-60859525 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 3-204
Cow position: chr6:61515211-61515416 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 97

Conread position: 3-204
Cow position: chr6:62479183-62479384 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 89

Conread position: 3-204
Cow position: chr6:65862670-65862467 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 25

Conread position: 3-204
Cow position: chr6:65871010-65870805 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 109

Conread position: 3-204
Cow position: chr6:66363263-66363463 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 73

Conread position: 3-204
Cow position: chr6:67950932-67950740 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 25

Conread position: 3-205
Cow position: chr6:899310-899504 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 61

Conread position: 3-205
Cow position: chr6:8637255-8637055 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 47

Conread position: 3-205
Cow position: chr6:10176316-10176521 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 85

Conread position: 3-205
Cow position: chr6:10332110-10332316 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 3-205
Cow position: chr6:12337969-12337765 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 114

Conread position: 3-205
Cow position: chr6:14949500-14949701 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 9

Conread position: 3-205
Cow position: chr6:20230848-20231045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 84

Conread position: 3-205
Cow position: chr6:25407410-25407616 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 95

Conread position: 3-205
Cow position: chr6:32126042-32125847 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 158, 21

Conread position: 3-205
Cow position: chr6:36196192-36195994 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 25

Conread position: 3-205
Cow position: chr6:38441156-38440962 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 157, 47

Conread position: 3-205
Cow position: chr6:38614796-38614604 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 47

Conread position: 3-205
Cow position: chr6:39994481-39994681 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 30

Conread position: 3-205
Cow position: chr6:42565669-42565466 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 83

Conread position: 3-205
Cow position: chr6:45160314-45160511 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 47

Conread position: 3-205
Cow position: chr6:54365350-54365543 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 86

Conread position: 3-205
Cow position: chr6:61575589-61575384 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 166

Conread position: 3-205
Cow position: chr6:63272632-63272833 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 21

Conread position: 3-210
Cow position: chr6:9008631-9008836 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 61

Conread position: 3-210
Cow position: chr6:24902164-24902366 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 25

Conread position: 3-212
Cow position: chr6:6460523-6460315 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 47, 61

Conread position: 3-213
Cow position: chr6:54294088-54293883 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 94

Conread position: 4-191
Cow position: chr6:38641473-38641292 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 92

Conread position: 4-202
Cow position: chr6:48344311-48344111 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 4-204
Cow position: chr6:12500840-12500641 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 14

Conread position: 4-204
Cow position: chr6:14696391-14696591 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 75

Conread position: 4-204
Cow position: chr6:58076209-58076006 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 98

Conread position: 4-207
Cow position: chr6:36470587-36470785 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 86

Conread position: 5-204
Cow position: chr6:14839046-14839245 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 164

Conread position: 5-204
Cow position: chr6:24327163-24327354 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 31

Conread position: 5-204
Cow position: chr6:61631630-61631838 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 45

Conread position: 5-205
Cow position: chr6:5095569-5095770 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 98

Conread position: 6-174
Cow position: chr6:52412838-52412665 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 6-202
Cow position: chr6:32210651-32210843 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 27

Conread position: 6-204
Cow position: chr6:18447532-18447727 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 45

Conread position: 6-204
Cow position: chr6:20097987-20098183 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 70

Conread position: 6-204
Cow position: chr6:38853678-38853877 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 29

Conread position: 6-204
Cow position: chr6:51581276-51581478 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 7-209
Cow position: chr6:45690614-45690817 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 12

Conread position: 9-186
Cow position: chr6:46245343-46245524 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 95

Conread position: 9-195
Cow position: chr6:46667086-46666894 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 138

Conread position: 9-203
Cow position: chr6:36928630-36928434 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 42

Conread position: 9-204
Cow position: chr6:1770224-1770414 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 27

Conread position: 9-204
Cow position: chr6:18988187-18987998 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 55

Conread position: 9-204
Cow position: chr6:21587443-21587640 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 8

Conread position: 9-205
Cow position: chr6:9375394-9375594 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 15

Conread position: 9-205
Cow position: chr6:10695841-10695649 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 26

Conread position: 9-205
Cow position: chr6:16746317-16746120 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 116

Conread position: 10-193
Cow position: chr6:7989436-7989621 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 152

Conread position: 10-202
Cow position: chr6:5609465-5609657 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 57

Conread position: 10-202
Cow position: chr6:6343399-6343209 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 23

Conread position: 10-204
Cow position: chr6:16706976-16706788 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 76

Conread position: 10-205
Cow position: chr6:10106018-10106216 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 23

Conread position: 11-139
Cow position: chr6:61608483-61608354 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 11-200
Cow position: chr6:17997342-17997530 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 86

Conread position: 11-201
Cow position: chr6:53460600-53460787 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 39

Conread position: 11-203
Cow position: chr6:9323134-9322941 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 53

Conread position: 11-204
Cow position: chr6:2547217-2547024 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 10

Conread position: 11-204
Cow position: chr6:23695966-23695779 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 53

Conread position: 11-204
Cow position: chr6:39358372-39358559 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 25

Conread position: 11-204
Cow position: chr6:44078489-44078303 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 52

Conread position: 11-204
Cow position: chr6:56849984-56849799 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 30

Conread position: 12-195
Cow position: chr6:1886693-1886875 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 21

Conread position: 12-199
Cow position: chr6:59015587-59015776 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 76

Conread position: 12-200
Cow position: chr6:12623441-12623256 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 12-202
Cow position: chr6:9736673-9736856 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 57

Conread position: 12-202
Cow position: chr6:13040428-13040235 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 52

Conread position: 12-203
Cow position: chr6:15923028-15923215 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 84

Conread position: 12-204
Cow position: chr6:21535027-21534840 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 85

Conread position: 12-204
Cow position: chr6:23247988-23248182 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 45

Conread position: 12-204
Cow position: chr6:24031351-24031156 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 53

Conread position: 12-204
Cow position: chr6:24468420-24468611 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 54

Conread position: 12-204
Cow position: chr6:24781585-24781782 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 173

Conread position: 12-204
Cow position: chr6:32121882-32121692 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 38

Conread position: 12-204
Cow position: chr6:54807200-54807004 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 54

Conread position: 12-204
Cow position: chr6:55607841-55608025 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 63

Conread position: 12-205
Cow position: chr6:607238-607042 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 38

Conread position: 12-205
Cow position: chr6:15300847-15301037 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 85

Conread position: 12-205
Cow position: chr6:44194571-44194765 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 45

Conread position: 12-205
Cow position: chr6:53652013-53651819 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 21

Conread position: 12-205
Cow position: chr6:61978203-61978401 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 60

Conread position: 12-205
Cow position: chr6:63047550-63047356 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 104

Conread position: 12-205
Cow position: chr6:67304780-67304582 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 177

Conread position: 13-192
Cow position: chr6:19695777-19695600 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 37

Conread position: 13-204
Cow position: chr6:19681552-19681739 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 58

Conread position: 14-204
Cow position: chr6:68049406-68049217 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 84

Conread position: 16-202
Cow position: chr6:26728557-26728743 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 49

Conread position: 16-204
Cow position: chr6:130194-130383 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 48

Conread position: 16-205
Cow position: chr6:38218638-38218452 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 48

Conread position: 16-209
Cow position: chr6:7539542-7539349 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 17

Conread position: 18-189
Cow position: chr6:51463647-51463820 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 7

Conread position: 18-204
Cow position: chr6:65676227-65676038 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 76

Conread position: 18-204
Cow position: chr6:65711797-65711608 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 76

Conread position: 18-205
Cow position: chr6:20329991-20329801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 52

Conread position: 19-194
Cow position: chr6:47989149-47988981 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 31

Conread position: 20-201
Cow position: chr6:42931142-42931327 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 30

Conread position: 20-204
Cow position: chr6:51398764-51398582 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 13

Conread position: 20-205
Cow position: chr6:59301857-59302044 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 182

Conread position: 26-204
Cow position: chr6:5958063-5958235 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 28

Conread position: 28-204
Cow position: chr6:17067863-17068038 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 75

Conread position: 40-205
Cow position: chr6:21184901-21184736 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 10

Conread position: 42-203
Cow position: chr6:3719061-3719226 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 56-204
Cow position: chr6:11830099-11829947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 56-205
Cow position: chr6:13741622-13741476 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 40

Conread position: 59-204
Cow position: chr6:16491994-16492139 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 15

Conread position: 62-205
Cow position: chr6:6117629-6117769 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 33

Show alignments to all cow chromosomes.