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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8012I13.3
        

               
Conread position:
               
1-274
               

               
Cow position:
               
chr24:42226497-42226234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
263, 26
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr24:14551021-14550682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
258, 48
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr24:13626514-13626159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr24:6928319-6928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
152, 174
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr24:22689336-22689730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 189
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr24:37267892-37267542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr24:27553336-27553079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr24:230515-230172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr24:30325561-30325783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
8-373
               

               
Cow position:
               
chr24:28690912-28690551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr24:15353667-15353343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr24:23863402-23863786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
11-238
               

               
Cow position:
               
chr24:25082655-25082899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
11-384
               

               
Cow position:
               
chr24:37025242-37024875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr24:22420180-22419957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr24:24165767-24165537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
12-384
               

               
Cow position:
               
chr24:37650890-37650522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
17-272
               

               
Cow position:
               
chr24:35310944-35310684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr24:38347892-38347534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
18-384
               

               
Cow position:
               
chr24:39483678-39483329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 5
               

               
Conread position:
               
25-384
               

               
Cow position:
               
chr24:18356846-18357201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
26-257
               

               
Cow position:
               
chr24:35029852-35030082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
26-365
               

               
Cow position:
               
chr24:26880967-26880637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
27-272
               

               
Cow position:
               
chr24:11028477-11028722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
27-384
               

               
Cow position:
               
chr24:5142148-5141796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
27-384
               

               
Cow position:
               
chr24:19179227-19179595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
28-272
               

               
Cow position:
               
chr24:34896499-34896735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
28-273
               

               
Cow position:
               
chr24:34079126-34079377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
28-342
               

               
Cow position:
               
chr24:18615224-18614893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 168
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr24:21606471-21606778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
28-371
               

               
Cow position:
               
chr24:19000252-18999919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr24:34772096-34772308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr24:36286771-36286540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
29-305
               

               
Cow position:
               
chr24:2380163-2379888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
29-333
               

               
Cow position:
               
chr24:9222179-9222482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
29-384
               

               
Cow position:
               
chr24:18344268-18343901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
29-384
               

               
Cow position:
               
chr24:18484785-18485145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
30-272
               

               
Cow position:
               
chr24:29539723-29539965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr24:33372751-33372466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
234, 109
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr24:25756095-25756393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr24:28775353-28775563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
31-275
               

               
Cow position:
               
chr24:13888914-13888664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
31-340
               

               
Cow position:
               
chr24:41406098-41405793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
31-368
               

               
Cow position:
               
chr24:44809441-44809117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
229, 22
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr24:27149587-27149245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
31-404
               

               
Cow position:
               
chr24:36711396-36711036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr24:13948323-13948027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr24:17407589-17407276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
32-378
               

               
Cow position:
               
chr24:25321188-25320854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
227, 141
               

               
Conread position:
               
32-384
               

               
Cow position:
               
chr24:18731903-18732271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
32-384
               

               
Cow position:
               
chr24:31812388-31812040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
32-384
               

               
Cow position:
               
chr24:40301365-40301011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
33-250
               

               
Cow position:
               
chr24:27940421-27940635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
33-255
               

               
Cow position:
               
chr24:29677709-29677935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr24:7846495-7846768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
33-317
               

               
Cow position:
               
chr24:10536557-10536272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
133, 141
               

               
Conread position:
               
33-332
               

               
Cow position:
               
chr24:28303159-28303463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
33-383
               

               
Cow position:
               
chr24:32054849-32054512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr24:1269978-1269650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 24
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr24:43371440-43371099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
232, 18
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr24:18750911-18750667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
110, 143
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr24:35332928-35332579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
34-383
               

               
Cow position:
               
chr24:6131690-6132020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
230, 16
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr24:18021068-18021277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 153
               

               
Conread position:
               
36-380
               

               
Cow position:
               
chr24:38006513-38006849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
101, 187
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr24:38815171-38814820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
37-347
               

               
Cow position:
               
chr24:3656168-3656477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
37-369
               

               
Cow position:
               
chr24:17311032-17311344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
227, 16
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr24:15557143-15557346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
38-296
               

               
Cow position:
               
chr24:27202281-27202026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
38-335
               

               
Cow position:
               
chr24:38613083-38612788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
38-344
               

               
Cow position:
               
chr24:15246461-15246752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
225, 60
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr24:25263536-25263869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
38-384
               

               
Cow position:
               
chr24:18281437-18281783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
39-331
               

               
Cow position:
               
chr24:39290241-39289948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
39-382
               

               
Cow position:
               
chr24:16510168-16509824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
39-384
               

               
Cow position:
               
chr24:352407-352753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 173
               

               
Conread position:
               
39-384
               

               
Cow position:
               
chr24:16089425-16089088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
40-301
               

               
Cow position:
               
chr24:1816491-1816231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
40-343
               

               
Cow position:
               
chr24:30229669-30229364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
125, 98
               

               
Conread position:
               
40-384
               

               
Cow position:
               
chr24:15057578-15057253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
40-384
               

               
Cow position:
               
chr24:28063144-28062804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
40-384
               

               
Cow position:
               
chr24:28722072-28721743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
222, 87
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr24:24755623-24755296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
223, 45
               

               
Conread position:
               
43-262
               

               
Cow position:
               
chr24:21715159-21715377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr24:39238954-39238715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
43-378
               

               
Cow position:
               
chr24:7914201-7913862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
116, 126
               

               
Conread position:
               
43-396
               

               
Cow position:
               
chr24:33621287-33621643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
44-355
               

               
Cow position:
               
chr24:43832714-43832404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
44-384
               

               
Cow position:
               
chr24:34762087-34761749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
45-368
               

               
Cow position:
               
chr24:29587189-29586863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr24:24457050-24457394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
47-249
               

               
Cow position:
               
chr24:3542489-3542286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
47-289
               

               
Cow position:
               
chr24:8677012-8676769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr24:33098286-33098631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr24:20249701-20250048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr24:27725821-27726163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
47-387
               

               
Cow position:
               
chr24:28234230-28233898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr24:12121085-12120881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
48-283
               

               
Cow position:
               
chr24:21834777-21835007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
216, 9
               

               
Conread position:
               
48-289
               

               
Cow position:
               
chr24:37651907-37651671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
48-293
               

               
Cow position:
               
chr24:19730968-19730723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr24:13586805-13587069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
163, 16
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr24:37823711-37823432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 98
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr24:39143798-39143469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
219, 16
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr24:44987185-44987519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
98, 331
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr24:12200223-12200561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr24:18474543-18474893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 16
               

               
Conread position:
               
49-251
               

               
Cow position:
               
chr24:37252343-37252142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chr24:7757956-7757740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
49-373
               

               
Cow position:
               
chr24:40537147-40537469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
49-378
               

               
Cow position:
               
chr24:19465723-19466063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
49-382
               

               
Cow position:
               
chr24:17860075-17860401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr24:27219902-27220239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 137
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr24:20017241-20017433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
50-245
               

               
Cow position:
               
chr24:11921724-11921920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr24:34301852-34302055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
50-279
               

               
Cow position:
               
chr24:42688025-42687804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
214, 14
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr24:19624051-19623780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 197
               

               
Conread position:
               
50-325
               

               
Cow position:
               
chr24:43028143-43028419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
93, 190
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr24:27958282-27958571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 118
               

               
Conread position:
               
50-344
               

               
Cow position:
               
chr24:13353212-13352930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr24:34273004-34272677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 241
               

               
Conread position:
               
50-376
               

               
Cow position:
               
chr24:10242600-10242921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr24:27040235-27039910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr24:11840368-11840044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
214, 7
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr24:3166004-3165674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr24:27607926-27608245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 90
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr24:11887339-11887013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr24:15861406-15861749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 168
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr24:31159814-31159469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr24:32204598-32204942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 248
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr24:41001450-41001112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
51-230
               

               
Cow position:
               
chr24:7275883-7275709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
51-230
               

               
Cow position:
               
chr24:28255880-28256053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
51-240
               

               
Cow position:
               
chr24:6159458-6159643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr24:23046711-23046910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr24:10499401-10499066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr24:16895241-16895584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 243
               

               
Conread position:
               
52-217
               

               
Cow position:
               
chr24:21656592-21656425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
52-225
               

               
Cow position:
               
chr24:26588402-26588231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
52-332
               

               
Cow position:
               
chr24:39910848-39911133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
52-347
               

               
Cow position:
               
chr24:27348993-27349290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr24:2402193-2402522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr24:27906621-27906290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr24:32609834-32609494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr24:36403974-36404292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
214, 13
               

               
Conread position:
               
53-217
               

               
Cow position:
               
chr24:6488387-6488227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
53-249
               

               
Cow position:
               
chr24:11155481-11155682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
96, 134
               

               
Conread position:
               
53-255
               

               
Cow position:
               
chr24:6739992-6740187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
53-255
               

               
Cow position:
               
chr24:33238072-33238284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
53-255
               

               
Cow position:
               
chr24:39903826-39904023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
53-257
               

               
Cow position:
               
chr24:18730529-18730323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
53-258
               

               
Cow position:
               
chr24:6887187-6886989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
53-268
               

               
Cow position:
               
chr24:32890863-32891076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
53-297
               

               
Cow position:
               
chr24:5360893-5360657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
211, 89
               

               
Conread position:
               
53-326
               

               
Cow position:
               
chr24:23574978-23575247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr24:20364234-20364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
53-335
               

               
Cow position:
               
chr24:27285006-27284721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 173
               

               
Conread position:
               
53-378
               

               
Cow position:
               
chr24:42103543-42103234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
53-382
               

               
Cow position:
               
chr24:19187114-19186815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
326, 87
               

               
Conread position:
               
53-382
               

               
Cow position:
               
chr24:37395026-37395354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
53-383
               

               
Cow position:
               
chr24:5632846-5633180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 120
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr24:27844352-27844670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 11
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr24:30483763-30484099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr24:42825333-42825642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
212, 52
               

               
Conread position:
               
54-264
               

               
Cow position:
               
chr24:3412862-3412655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
54-332
               

               
Cow position:
               
chr24:20807705-20807439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr24:28553391-28553695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
210, 38
               

               
Conread position:
               
55-384
               

               
Cow position:
               
chr24:17104391-17104720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
56-207
               

               
Cow position:
               
chr24:41925995-41925851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
56-377
               

               
Cow position:
               
chr24:390279-389960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr24:39849713-39850037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
208, 89
               

               
Conread position:
               
57-257
               

               
Cow position:
               
chr24:22129466-22129662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr24:28510969-28510750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
207, 81
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr24:175330-175586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr24:28600260-28600535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr24:43537137-43536856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
57-368
               

               
Cow position:
               
chr24:27713232-27713536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
207, 63
               

               
Conread position:
               
57-378
               

               
Cow position:
               
chr24:29595622-29595952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 236
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:2675514-2675174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 229
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:3494059-3493744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:11119472-11119137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 235
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:30313851-30314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:34396012-34396322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr24:34742927-34742607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
58-219
               

               
Cow position:
               
chr24:27719353-27719510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
58-257
               

               
Cow position:
               
chr24:36775594-36775798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
58-273
               

               
Cow position:
               
chr24:23666948-23667155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
58-321
               

               
Cow position:
               
chr24:2992703-2992963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr24:15289004-15288726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
128, 93
               

               
Conread position:
               
58-369
               

               
Cow position:
               
chr24:29605856-29606176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr24:25194443-25194121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr24:28496406-28496731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
59-217
               

               
Cow position:
               
chr24:38427934-38428094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
59-220
               

               
Cow position:
               
chr24:27412939-27413095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
59-231
               

               
Cow position:
               
chr24:25947683-25947857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
59-235
               

               
Cow position:
               
chr24:32429586-32429764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
59-252
               

               
Cow position:
               
chr24:39304735-39304937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr24:11836225-11836433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr24:42984571-42984352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
59-297
               

               
Cow position:
               
chr24:18137124-18137369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr24:18755936-18755661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
59-352
               

               
Cow position:
               
chr24:37974807-37975097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr24:17943001-17943302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr24:2359009-2359306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr24:41980484-41980794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
211, 167
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr24:19801015-19800704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr24:35675707-35675397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 80
               

               
Conread position:
               
60-231
               

               
Cow position:
               
chr24:21524240-21524069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
60-232
               

               
Cow position:
               
chr24:24091159-24091336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
60-274
               

               
Cow position:
               
chr24:22133341-22133132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
60-274
               

               
Cow position:
               
chr24:29984815-29985023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
204, 68
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr24:26001562-26001340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
60-362
               

               
Cow position:
               
chr24:39523275-39523573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 92
               

               
Conread position:
               
60-379
               

               
Cow position:
               
chr24:20801170-20801488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
111, 125
               

               
Conread position:
               
60-382
               

               
Cow position:
               
chr24:212145-211839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
204, 68
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr24:23694736-23695040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr24:30236047-30235726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr24:32739088-32739419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
84, 127
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr24:16995053-16994739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr24:17284808-17285142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr24:24490851-24491158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 13
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr24:26928766-26929093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
61-235
               

               
Cow position:
               
chr24:26569633-26569458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 98
               

               
Conread position:
               
61-249
               

               
Cow position:
               
chr24:18874646-18874834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
62-244
               

               
Cow position:
               
chr24:10219213-10219393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
62-261
               

               
Cow position:
               
chr24:13610474-13610286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
62-278
               

               
Cow position:
               
chr24:33244559-33244353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
62-297
               

               
Cow position:
               
chr24:42175698-42175469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
168, 83
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr24:25884975-25885309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 161
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr24:27630572-27630255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr24:33944579-33944256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
63-332
               

               
Cow position:
               
chr24:28043164-28042876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr24:18374935-18374630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr24:37038062-37037751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
65-219
               

               
Cow position:
               
chr24:24540322-24540474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
68-274
               

               
Cow position:
               
chr24:25122504-25122306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr24:32230338-32230541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
69-383
               

               
Cow position:
               
chr24:36008652-36008338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
69-384
               

               
Cow position:
               
chr24:36173613-36173929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr24:41916421-41916191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
71-329
               

               
Cow position:
               
chr24:31816739-31816483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
72-231
               

               
Cow position:
               
chr24:43358858-43358703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr24:28344543-28344338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
72-363
               

               
Cow position:
               
chr24:29561416-29561701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 23
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr24:40130299-40129985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
72-383
               

               
Cow position:
               
chr24:23556174-23556474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
72-383
               

               
Cow position:
               
chr24:38841270-38841551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
302, 51
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr24:18741402-18741719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 219
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr24:41423759-41423461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
73-247
               

               
Cow position:
               
chr24:6008008-6008181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
73-247
               

               
Cow position:
               
chr24:17073103-17073268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
73-255
               

               
Cow position:
               
chr24:162168-161984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
73-321
               

               
Cow position:
               
chr24:6912196-6912453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
73-339
               

               
Cow position:
               
chr24:28342524-28342247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
73-368
               

               
Cow position:
               
chr24:35632143-35631855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
73-384
               

               
Cow position:
               
chr24:22225353-22225033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
74-384
               

               
Cow position:
               
chr24:7476189-7476501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
75-382
               

               
Cow position:
               
chr24:41756010-41755717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
189, 53
               

               
Conread position:
               
76-384
               

               
Cow position:
               
chr24:44040852-44041161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
79-377
               

               
Cow position:
               
chr24:6102983-6102688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
185, 38
               

               
Conread position:
               
80-384
               

               
Cow position:
               
chr24:20943315-20943019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
83-367
               

               
Cow position:
               
chr24:20594700-20594407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
85-384
               

               
Cow position:
               
chr24:29782314-29782016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
86-384
               

               
Cow position:
               
chr24:17294046-17294340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
86-384
               

               
Cow position:
               
chr24:28990711-28990416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
87-386
               

               
Cow position:
               
chr24:16645170-16645473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
95-383
               

               
Cow position:
               
chr24:20874820-20874533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 51
               

               
Conread position:
               
96-384
               

               
Cow position:
               
chr24:5754967-5754690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
96-384
               

               
Cow position:
               
chr24:31359457-31359178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
98-347
               

               
Cow position:
               
chr24:16895010-16895241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
98-367
               

               
Cow position:
               
chr24:26554457-26554729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr24:42344857-42345153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
99-383
               

               
Cow position:
               
chr24:17832684-17832961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
165, 134
               

               
Conread position:
               
116-382
               

               
Cow position:
               
chr24:2095760-2096035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
128-297
               

               
Cow position:
               
chr24:28689776-28689605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 151
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr24:17955339-17955591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr24:18017337-18017079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr24:23186810-23187065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr24:28326972-28327232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr24:43200168-43200424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
129-282
               

               
Cow position:
               
chr24:17375742-17375591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
129-343
               

               
Cow position:
               
chr24:19769600-19769381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
129-348
               

               
Cow position:
               
chr24:14457619-14457834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
129-348
               

               
Cow position:
               
chr24:39791647-39791427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
129-362
               

               
Cow position:
               
chr24:35150625-35150396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 103
               

               
Conread position:
               
129-383
               

               
Cow position:
               
chr24:33153882-33153630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr24:201531-201782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr24:34008466-34008726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
131-281
               

               
Cow position:
               
chr24:42981657-42981805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 88
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr24:29679208-29679416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr24:27290976-27290729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
133, 154
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:14171589-14171842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:18331825-18331576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:18970404-18970656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:29673625-29673371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:33221829-33222090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr24:33465519-33465756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr24:15373509-15373262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
132, 165
               

               
Conread position:
               
134-343
               

               
Cow position:
               
chr24:8887014-8886803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr24:8006406-8006168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr24:32071063-32070818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 92
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr24:28289153-28289396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr24:43432888-43432644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
142-384
               

               
Cow position:
               
chr24:43364451-43364211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
146-320
               

               
Cow position:
               
chr24:16268039-16268212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 98
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr24:24662041-24662272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
118, 141
               

               
Conread position:
               
146-383
               

               
Cow position:
               
chr24:33230764-33230528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr24:18975299-18975052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr24:28319120-28319346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 171
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr24:29063570-29063795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr24:30897449-30897685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr24:24250812-24250580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
148-368
               

               
Cow position:
               
chr24:27824550-27824321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
116, 198
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr24:32369827-32370092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
151-332
               

               
Cow position:
               
chr24:28045843-28045655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
151-378
               

               
Cow position:
               
chr24:29171046-29170828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
151-397
               

               
Cow position:
               
chr24:27748725-27748488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
152-384
               

               
Cow position:
               
chr24:43927249-43927470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
153-339
               

               
Cow position:
               
chr24:30308475-30308660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr24:19736252-19736476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr24:33723762-33723992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr24:39227077-39226854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr24:31324365-31324133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr24:43967423-43967649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr24:3430813-3430591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr24:15707380-15707582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr24:40837828-40837635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
185-378
               

               
Cow position:
               
chr24:41986046-41985848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
185-384
               

               
Cow position:
               
chr24:27340968-27341168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
187-364
               

               
Cow position:
               
chr24:32194561-32194380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr24:6150072-6149877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
191-384
               

               
Cow position:
               
chr24:29180931-29180740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr24:24061765-24061989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
194-380
               

               
Cow position:
               
chr24:39841807-39841993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
195-384
               

               
Cow position:
               
chr24:7001028-7001212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
199-378
               

               
Cow position:
               
chr24:20024650-20024474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
202-384
               

               
Cow position:
               
chr24:6487950-6487775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
203-380
               

               
Cow position:
               
chr24:39833482-39833656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
220-384
               

               
Cow position:
               
chr24:27052478-27052644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
233-384
               

               
Cow position:
               
chr24:35794732-35794884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
243-384
               

               
Cow position:
               
chr24:4615527-4615667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 43
               
Show alignments to all cow chromosomes.