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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8012I13.3
        

               
Conread position:
               
2-384
               

               
Cow position:
               
chr25:21289604-21289218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 175
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr25:36873084-36873360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr25:8345744-8346079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 178
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr25:18487923-18487561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr25:18201682-18202052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr25:26160778-26160448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr25:17725283-17724966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
7-383
               

               
Cow position:
               
chr25:33686433-33686804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
8-384
               

               
Cow position:
               
chr25:1838488-1838111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr25:33555860-33555536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 204
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr25:7750687-7750330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 40
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr25:36555452-36555796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
15-384
               

               
Cow position:
               
chr25:7008164-7007789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr25:13826669-13826408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
249, 40
               

               
Conread position:
               
22-243
               

               
Cow position:
               
chr25:3141733-3141518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
23-203
               

               
Cow position:
               
chr25:7441239-7441064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
24-418
               

               
Cow position:
               
chr25:36020643-36020246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr25:13272804-13272447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr25:24115088-24115312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
27-384
               

               
Cow position:
               
chr25:26655120-26654783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
229, 23
               

               
Conread position:
               
27-413
               

               
Cow position:
               
chr25:7035789-7035399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
28-250
               

               
Cow position:
               
chr25:5791487-5791709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
28-347
               

               
Cow position:
               
chr25:26578373-26578700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
226, 25
               

               
Conread position:
               
28-384
               

               
Cow position:
               
chr25:11316131-11315784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
236, 133
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr25:5637163-5637402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
235, 20
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr25:33959022-33959356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 134
               

               
Conread position:
               
29-384
               

               
Cow position:
               
chr25:6463802-6464160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr25:26643038-26642858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
31-251
               

               
Cow position:
               
chr25:21443142-21443362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
31-273
               

               
Cow position:
               
chr25:26236284-26236527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
31-383
               

               
Cow position:
               
chr25:22179132-22178796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
233, 18
               

               
Conread position:
               
31-384
               

               
Cow position:
               
chr25:20349097-20348733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
32-292
               

               
Cow position:
               
chr25:28423372-28423107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr25:4192233-4192022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
33-326
               

               
Cow position:
               
chr25:21184109-21183813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
33-344
               

               
Cow position:
               
chr25:12807263-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr25:24207190-24207524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr25:22347008-22346647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
34-288
               

               
Cow position:
               
chr25:9769646-9769385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr25:6469988-6470344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr25:6292793-6292436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
35-241
               

               
Cow position:
               
chr25:5808170-5807962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 152
               

               
Conread position:
               
35-289
               

               
Cow position:
               
chr25:12194998-12195259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 153
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr25:17915006-17914675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
36-412
               

               
Cow position:
               
chr25:20157073-20157452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr25:17141318-17141148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
37-238
               

               
Cow position:
               
chr25:24147737-24147926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
37-251
               

               
Cow position:
               
chr25:33100796-33100580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
37-255
               

               
Cow position:
               
chr25:36370039-36369822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
37-255
               

               
Cow position:
               
chr25:36375730-36375513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr25:3744512-3744762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
37-340
               

               
Cow position:
               
chr25:41130449-41130146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr25:30817110-30816766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
37-384
               

               
Cow position:
               
chr25:2415020-2414693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
37-384
               

               
Cow position:
               
chr25:5921164-5920812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
38-273
               

               
Cow position:
               
chr25:31514403-31514166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 152
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr25:9316242-9315930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr25:18551117-18551332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
39-383
               

               
Cow position:
               
chr25:9843394-9843052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
39-384
               

               
Cow position:
               
chr25:11065922-11066274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
40-280
               

               
Cow position:
               
chr25:18928993-18929215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
222, 12
               

               
Conread position:
               
40-326
               

               
Cow position:
               
chr25:5646292-5646581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
219, 104
               

               
Conread position:
               
40-383
               

               
Cow position:
               
chr25:18720911-18721239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 30
               

               
Conread position:
               
40-397
               

               
Cow position:
               
chr25:9989888-9990229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr25:31926169-31926365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
41-272
               

               
Cow position:
               
chr25:14107052-14106817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr25:28939925-28940090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
43-289
               

               
Cow position:
               
chr25:9616054-9615805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
45-368
               

               
Cow position:
               
chr25:8157299-8157620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr25:40904613-40904940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr25:35612086-35612429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 257
               

               
Conread position:
               
45-385
               

               
Cow position:
               
chr25:12293533-12293873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr25:41150754-41151086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
47-295
               

               
Cow position:
               
chr25:35109067-35109306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
47-368
               

               
Cow position:
               
chr25:8485274-8485602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr25:7217029-7216705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr25:22315413-22315077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 6
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr25:30852974-30852631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
224, 10
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr25:21082197-21082366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
48-343
               

               
Cow position:
               
chr25:7673515-7673205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr25:1823881-1824205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 246
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr25:17991385-17991700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
48-434
               

               
Cow position:
               
chr25:20664070-20664469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 358
               

               
Conread position:
               
49-260
               

               
Cow position:
               
chr25:14944920-14945124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
49-273
               

               
Cow position:
               
chr25:2111245-2111033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr25:19584577-19584347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr25:26136612-26136949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
50-213
               

               
Cow position:
               
chr25:30709138-30709303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
50-215
               

               
Cow position:
               
chr25:13565127-13565280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr25:12223771-12223598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr25:20085784-20085597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr25:15349702-15349897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr25:11060342-11060135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr25:2362032-2361825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
214, 77
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr25:4157040-4157282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
205, 96
               

               
Conread position:
               
50-305
               

               
Cow position:
               
chr25:28597397-28597658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
62, 242
               

               
Conread position:
               
50-307
               

               
Cow position:
               
chr25:9025331-9025078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr25:38958152-38957911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr25:7726872-7726611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 140
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr25:11957011-11956733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr25:12305485-12305189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
50-355
               

               
Cow position:
               
chr25:33773561-33773877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr25:11432740-11433072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr25:21245386-21245722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 248
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr25:21191683-21191366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 7
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:447954-448293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:3992989-3992668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 172
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:23053770-23053433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:24573266-24572943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:26089620-26089940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 41
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr25:26524168-26523839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
51-221
               

               
Cow position:
               
chr25:32750282-32750112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr25:18491242-18491044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr25:1802819-1802596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
52-344
               

               
Cow position:
               
chr25:10156759-10156488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
52-382
               

               
Cow position:
               
chr25:36082074-36081753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr25:14102872-14102670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
53-255
               

               
Cow position:
               
chr25:2662598-2662402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
53-269
               

               
Cow position:
               
chr25:20203112-20202901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
211, 67
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr25:36872852-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
211, 11
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr25:17919182-17918957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
53-309
               

               
Cow position:
               
chr25:40682941-40682687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
211, 103
               

               
Conread position:
               
53-321
               

               
Cow position:
               
chr25:19478894-19478610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr25:1840525-1840255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
211, 88
               

               
Conread position:
               
53-327
               

               
Cow position:
               
chr25:36073795-36074069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 153
               

               
Conread position:
               
53-364
               

               
Cow position:
               
chr25:26224832-26225131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr25:17474309-17474619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
53-368
               

               
Cow position:
               
chr25:12260683-12261000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
53-371
               

               
Cow position:
               
chr25:22317887-22317568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
53-373
               

               
Cow position:
               
chr25:7817189-7816869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
53-383
               

               
Cow position:
               
chr25:8120985-8120656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:4489107-4488794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:7010766-7011099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
131, 104
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:9002873-9002549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:12755286-12755618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:20008339-20008009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 237
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:21893539-21893210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:24669248-24669562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr25:26701224-26700911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
211, 78
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr25:33457930-33457603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr25:18810535-18810297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr25:22298835-22298590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
212, 91
               

               
Conread position:
               
54-383
               

               
Cow position:
               
chr25:27869014-27868677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
55-235
               

               
Cow position:
               
chr25:18934434-18934612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
55-382
               

               
Cow position:
               
chr25:20069915-20069600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
56-202
               

               
Cow position:
               
chr25:13470510-13470658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr25:22734207-22734018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
56-381
               

               
Cow position:
               
chr25:26338661-26338327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
56-383
               

               
Cow position:
               
chr25:12509820-12510134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 71
               

               
Conread position:
               
57-208
               

               
Cow position:
               
chr25:18131171-18131328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
57-247
               

               
Cow position:
               
chr25:7684699-7684887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
57-249
               

               
Cow position:
               
chr25:22565766-22565947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
57-265
               

               
Cow position:
               
chr25:11841499-11841290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr25:22348258-22348508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-344
               

               
Cow position:
               
chr25:13621162-13621445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
209, 84
               

               
Conread position:
               
57-355
               

               
Cow position:
               
chr25:13768158-13767871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
208, 34
               

               
Conread position:
               
57-376
               

               
Cow position:
               
chr25:14152388-14152070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 121
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr25:22731025-22730714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
173, 82
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr25:33557466-33557153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 88
               

               
Conread position:
               
57-383
               

               
Cow position:
               
chr25:33550712-33550384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:4245865-4245564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
207, 88
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:16921593-16921916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:18294111-18294443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 119
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:20523038-20523356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
244, 37
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:21668448-21668120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 90
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:26679427-26679102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 240
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:32453231-32453520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
58-220
               

               
Cow position:
               
chr25:15999351-15999514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr25:14949614-14949777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
58-254
               

               
Cow position:
               
chr25:35902945-35902751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr25:14419893-14419694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
58-270
               

               
Cow position:
               
chr25:9573936-9574143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
206, 98
               

               
Conread position:
               
58-343
               

               
Cow position:
               
chr25:37331846-37332130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
206, 36
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr25:5846606-5846905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr25:14791953-14791628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
208, 93
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr25:21192742-21193066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 88
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr25:30278998-30279330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr25:36746249-36746568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 130
               

               
Conread position:
               
58-391
               

               
Cow position:
               
chr25:26134245-26133909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
59-244
               

               
Cow position:
               
chr25:22373288-22373476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
59-249
               

               
Cow position:
               
chr25:15423423-15423616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
59-260
               

               
Cow position:
               
chr25:13542785-13542990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
59-275
               

               
Cow position:
               
chr25:23519839-23520046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
59-305
               

               
Cow position:
               
chr25:18760513-18760754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr25:7551171-7551410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
205, 81
               

               
Conread position:
               
59-335
               

               
Cow position:
               
chr25:35762786-35762513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 163
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr25:11585727-11585409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 237
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr25:38135951-38135637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr25:6996983-6996656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr25:7306488-7306176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr25:12609541-12609219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
59-388
               

               
Cow position:
               
chr25:1763282-1762966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
60-237
               

               
Cow position:
               
chr25:26269517-26269696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
60-238
               

               
Cow position:
               
chr25:20487238-20487418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 134
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr25:13823522-13823760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
206, 118
               

               
Conread position:
               
60-332
               

               
Cow position:
               
chr25:14720929-14720672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
204, 81
               

               
Conread position:
               
60-341
               

               
Cow position:
               
chr25:432851-433132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
60-342
               

               
Cow position:
               
chr25:35052421-35052705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 192
               

               
Conread position:
               
60-373
               

               
Cow position:
               
chr25:27532476-27532786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
60-382
               

               
Cow position:
               
chr25:37448624-37448312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
243, 80
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr25:34978660-34978992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:4521644-4521960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 81
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:13380401-13380738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:14833471-14833784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:19130051-19129727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 107
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:19679549-19679220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 87
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr25:32277419-32277725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
60-385
               

               
Cow position:
               
chr25:20785390-20785712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
60-391
               

               
Cow position:
               
chr25:17119941-17119608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
61-262
               

               
Cow position:
               
chr25:31657084-31657281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
61-265
               

               
Cow position:
               
chr25:23998743-23998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
61-274
               

               
Cow position:
               
chr25:14225563-14225345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
61-348
               

               
Cow position:
               
chr25:13567180-13566872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr25:27801475-27801166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr25:22296817-22297142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr25:7641259-7641576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr25:22756808-22756483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr25:35348102-35347782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
62-235
               

               
Cow position:
               
chr25:14210171-14210006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
62-282
               

               
Cow position:
               
chr25:28667855-28668075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
62-319
               

               
Cow position:
               
chr25:15273859-15273612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
200, 60
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr25:16318955-16319256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
202, 48
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr25:17658807-17658487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
103, 107
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr25:24651262-24651577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
62-385
               

               
Cow position:
               
chr25:17704935-17704626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
62-425
               

               
Cow position:
               
chr25:6928321-6928673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
63-243
               

               
Cow position:
               
chr25:14849458-14849637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
63-288
               

               
Cow position:
               
chr25:21317224-21317459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
64-288
               

               
Cow position:
               
chr25:18288577-18288800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
200, 83
               

               
Conread position:
               
64-332
               

               
Cow position:
               
chr25:11276740-11276478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
64-383
               

               
Cow position:
               
chr25:11051715-11051405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 27
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr25:9269533-9269230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
198, 82
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr25:14513299-14512985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
65-232
               

               
Cow position:
               
chr25:10856524-10856688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr25:6682858-6683188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 288
               

               
Conread position:
               
68-244
               

               
Cow position:
               
chr25:11857797-11857973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
68-247
               

               
Cow position:
               
chr25:7005704-7005523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
68-282
               

               
Cow position:
               
chr25:16372742-16372526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
68-283
               

               
Cow position:
               
chr25:13223086-13222874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 7
               

               
Conread position:
               
68-378
               

               
Cow position:
               
chr25:19363871-19364181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
68-382
               

               
Cow position:
               
chr25:10504146-10504461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
68-397
               

               
Cow position:
               
chr25:7380649-7380977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
69-247
               

               
Cow position:
               
chr25:26061536-26061716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
69-282
               

               
Cow position:
               
chr25:35339002-35339215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
71-252
               

               
Cow position:
               
chr25:23323683-23323496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
71-353
               

               
Cow position:
               
chr25:16100772-16100490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
71-384
               

               
Cow position:
               
chr25:20402523-20402842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
72-262
               

               
Cow position:
               
chr25:11760275-11760454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
72-283
               

               
Cow position:
               
chr25:26072378-26072583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
72-328
               

               
Cow position:
               
chr25:26306018-26306276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr25:13443222-13443519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
72-382
               

               
Cow position:
               
chr25:36835247-36835548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr25:17566776-17566459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr25:20023209-20023515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
73-363
               

               
Cow position:
               
chr25:23828946-23829233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr25:25716829-25716544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
191, 72
               

               
Conread position:
               
74-217
               

               
Cow position:
               
chr25:22571142-22570999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
74-347
               

               
Cow position:
               
chr25:23244821-23245091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 71
               

               
Conread position:
               
74-378
               

               
Cow position:
               
chr25:36872546-36872242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 205
               

               
Conread position:
               
75-378
               

               
Cow position:
               
chr25:23779151-23779441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
76-261
               

               
Cow position:
               
chr25:8347834-8347649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-384
               

               
Cow position:
               
chr25:2624975-2624683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
76-384
               

               
Cow position:
               
chr25:17190573-17190866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
79-342
               

               
Cow position:
               
chr25:7806146-7805880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr25:17342639-17342323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
80-384
               

               
Cow position:
               
chr25:22369563-22369267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
81-230
               

               
Cow position:
               
chr25:6782036-6781890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
82-292
               

               
Cow position:
               
chr25:37637486-37637703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
83-384
               

               
Cow position:
               
chr25:18075840-18075546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
87-384
               

               
Cow position:
               
chr25:788427-788139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
89-384
               

               
Cow position:
               
chr25:16065050-16064763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
90-274
               

               
Cow position:
               
chr25:9107363-9107541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
90-343
               

               
Cow position:
               
chr25:15715039-15714788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
174, 54
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr25:7799721-7799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
90-378
               

               
Cow position:
               
chr25:15634299-15634593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
90-382
               

               
Cow position:
               
chr25:11661660-11661940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
95-255
               

               
Cow position:
               
chr25:15573551-15573391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-352
               

               
Cow position:
               
chr25:8102834-8102574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
105-368
               

               
Cow position:
               
chr25:25861192-25861467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
117-384
               

               
Cow position:
               
chr25:5474091-5474352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
127-381
               

               
Cow position:
               
chr25:38982224-38981980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
127-384
               

               
Cow position:
               
chr25:3145976-3145718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
127-384
               

               
Cow position:
               
chr25:26238996-26238745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
128-332
               

               
Cow position:
               
chr25:23505180-23504973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
128-345
               

               
Cow position:
               
chr25:26052031-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
128-355
               

               
Cow position:
               
chr25:34241973-34242194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr25:61778-61551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr25:18906013-18905759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
129-326
               

               
Cow position:
               
chr25:7012552-7012360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
129-344
               

               
Cow position:
               
chr25:23745387-23745171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
129-352
               

               
Cow position:
               
chr25:36120625-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr25:7581297-7581550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr25:30619190-30618940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
130-332
               

               
Cow position:
               
chr25:12116871-12117076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr25:10217921-10218167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr25:15463712-15463561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr25:30624956-30625110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr25:40931398-40931194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
131-377
               

               
Cow position:
               
chr25:28187818-28188065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr25:13569051-13569290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr25:22531408-22531161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 111
               

               
Conread position:
               
131-383
               

               
Cow position:
               
chr25:17144563-17144299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
131-383
               

               
Cow position:
               
chr25:34170073-34169829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr25:14196986-14196734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr25:23917967-23917717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
132-337
               

               
Cow position:
               
chr25:5920205-5920005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
132-382
               

               
Cow position:
               
chr25:15254222-15254455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
132, 143
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr25:21894758-21895012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
134-366
               

               
Cow position:
               
chr25:12252687-12252920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
135-271
               

               
Cow position:
               
chr25:30064789-30064927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr25:36762227-36761980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 141
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr25:22341647-22341437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
137-384
               

               
Cow position:
               
chr25:8961891-8961648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 95
               

               
Conread position:
               
137-384
               

               
Cow position:
               
chr25:27531152-27531398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
138-383
               

               
Cow position:
               
chr25:14157745-14157497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
126, 139
               

               
Conread position:
               
141-333
               

               
Cow position:
               
chr25:6227154-6226961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr25:20133200-20133436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
141-384
               

               
Cow position:
               
chr25:4681343-4681111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
142-384
               

               
Cow position:
               
chr25:18564602-18564363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
146-262
               

               
Cow position:
               
chr25:34967397-34967513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-321
               

               
Cow position:
               
chr25:6133979-6134155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
146-334
               

               
Cow position:
               
chr25:7379035-7379226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
146-352
               

               
Cow position:
               
chr25:4948074-4947869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
120, 162
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr25:12840606-12840842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr25:20076608-20076368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 210
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr25:22750896-22751135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
148-384
               

               
Cow position:
               
chr25:12319243-12319473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
151-385
               

               
Cow position:
               
chr25:6688052-6687822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
152-383
               

               
Cow position:
               
chr25:2136456-2136229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 102
               

               
Conread position:
               
152-384
               

               
Cow position:
               
chr25:11436701-11436932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
112, 201
               

               
Conread position:
               
152-384
               

               
Cow position:
               
chr25:12778435-12778654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr25:6961048-6961280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr25:17975273-17975493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 122
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr25:25051272-25051507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
155-321
               

               
Cow position:
               
chr25:36019566-36019731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
155-345
               

               
Cow position:
               
chr25:23817737-23817935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr25:4547615-4547842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
156-366
               

               
Cow position:
               
chr25:24066564-24066765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr25:36036677-36036907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 169
               

               
Conread position:
               
161-332
               

               
Cow position:
               
chr25:14809370-14809206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
103, 123
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr25:16714173-16714387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr25:40321191-40321433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr25:5407835-5407631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 188
               

               
Conread position:
               
168-283
               

               
Cow position:
               
chr25:14211719-14211603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
168-384
               

               
Cow position:
               
chr25:15377416-15377202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr25:14118175-14117976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
179-378
               

               
Cow position:
               
chr25:19317344-19317141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
190-384
               

               
Cow position:
               
chr25:24052034-24051837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
191-368
               

               
Cow position:
               
chr25:38425428-38425252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
192-381
               

               
Cow position:
               
chr25:12081256-12081443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
193-384
               

               
Cow position:
               
chr25:32191725-32191545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
196-384
               

               
Cow position:
               
chr25:5836895-5837088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 162
               

               
Conread position:
               
198-379
               

               
Cow position:
               
chr25:26642647-26642462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr25:7449859-7449681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
240-389
               

               
Cow position:
               
chr25:36033456-36033307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 34
               
Show alignments to all cow chromosomes.