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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8012I13.3
        

               
Conread position:
               
1-235
               

               
Cow position:
               
chr9:6205574-6205337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr9:36624158-36623907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr9:55495219-55494942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:21030078-21030455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr9:31215852-31216231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 49
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr9:15983300-15982929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr9:16811885-16811507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr9:64140791-64140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr9:41470337-41470080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 193
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr9:25965065-25964696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr9:24079079-24079326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr9:8992403-8992124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 47
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr9:33411799-33411456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr9:31346717-31347107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr9:41416106-41416507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr9:48730210-48730564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr9:4263310-4262946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-273
               

               
Cow position:
               
chr9:4181769-4181506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr9:20755977-20755644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr9:34024479-34024789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 11
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:48808923-48809156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr9:6237707-6237508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr9:40221396-40221169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 47
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr9:47500414-47500054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr9:11448017-11447809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
20-317
               

               
Cow position:
               
chr9:12398386-12398685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
20-386
               

               
Cow position:
               
chr9:9724088-9723729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
21-384
               

               
Cow position:
               
chr9:53762491-53762850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 43
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr9:28722493-28722711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
25-249
               

               
Cow position:
               
chr9:55807428-55807649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
26-235
               

               
Cow position:
               
chr9:27686377-27686589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
26-252
               

               
Cow position:
               
chr9:41644956-41644729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
26-256
               

               
Cow position:
               
chr9:26394556-26394325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
26-348
               

               
Cow position:
               
chr9:38941650-38941315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr9:4512275-4512640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr9:6338591-6338951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
26-385
               

               
Cow position:
               
chr9:41728056-41728411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 119
               

               
Conread position:
               
27-355
               

               
Cow position:
               
chr9:1878198-1877884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
237, 24
               

               
Conread position:
               
27-367
               

               
Cow position:
               
chr9:34697506-34697170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
28-248
               

               
Cow position:
               
chr9:35295492-35295707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr9:2397607-2397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
28-330
               

               
Cow position:
               
chr9:6954452-6954148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
28-352
               

               
Cow position:
               
chr9:9311657-9311980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
28-367
               

               
Cow position:
               
chr9:44396457-44396795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 162
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr9:61544461-61544795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chr9:35933014-35932825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
29-240
               

               
Cow position:
               
chr9:16216777-16216990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
135, 146
               

               
Conread position:
               
29-252
               

               
Cow position:
               
chr9:13993564-13993786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
29-272
               

               
Cow position:
               
chr9:58132147-58131911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
235, 22
               

               
Conread position:
               
29-340
               

               
Cow position:
               
chr9:52755052-52754748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr9:52485113-52484774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
228, 111
               

               
Conread position:
               
29-382
               

               
Cow position:
               
chr9:30402633-30402269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
29-383
               

               
Cow position:
               
chr9:10144683-10144325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr9:45483905-45484132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
30-342
               

               
Cow position:
               
chr9:17677312-17677003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
30-348
               

               
Cow position:
               
chr9:19902888-19903196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
30-383
               

               
Cow position:
               
chr9:22318163-22318498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr9:42061895-42062265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
31-247
               

               
Cow position:
               
chr9:32662235-32662015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 158
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr9:13945405-13945658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr9:30012674-30012925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr9:45444960-45445278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 281
               

               
Conread position:
               
31-375
               

               
Cow position:
               
chr9:10906018-10905672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr9:20681596-20681259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
233, 19
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr9:56827277-56827523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
32-273
               

               
Cow position:
               
chr9:52689811-52689568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
32-368
               

               
Cow position:
               
chr9:26279371-26279035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 248
               

               
Conread position:
               
32-383
               

               
Cow position:
               
chr9:61457425-61457779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 155
               

               
Conread position:
               
33-243
               

               
Cow position:
               
chr9:11380842-11380634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
33-252
               

               
Cow position:
               
chr9:1884337-1884109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
33-299
               

               
Cow position:
               
chr9:2037245-2037497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
33-316
               

               
Cow position:
               
chr9:9686614-9686329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
33-332
               

               
Cow position:
               
chr9:35729229-35728928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
33-377
               

               
Cow position:
               
chr9:62724350-62724682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
33-382
               

               
Cow position:
               
chr9:19067565-19067928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
18, 170
               

               
Conread position:
               
33-383
               

               
Cow position:
               
chr9:5327064-5327407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr9:43207573-43207224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr9:58448322-58447970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr9:64105704-64106060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
34-271
               

               
Cow position:
               
chr9:23971088-23970855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 18
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr9:47517002-47517253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr9:58452261-58451979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
230, 17
               

               
Conread position:
               
34-346
               

               
Cow position:
               
chr9:50310958-50310659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr9:43757344-43757690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
35-216
               

               
Cow position:
               
chr9:13722332-13722153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
35-225
               

               
Cow position:
               
chr9:20828708-20828900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
35-271
               

               
Cow position:
               
chr9:44822516-44822283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
229, 29
               

               
Conread position:
               
37-297
               

               
Cow position:
               
chr9:34279256-34278995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
37-360
               

               
Cow position:
               
chr9:16120982-16121300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
214, 16
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr9:44389190-44388863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
37-384
               

               
Cow position:
               
chr9:8998162-8998509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr9:9494964-9495149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
38-233
               

               
Cow position:
               
chr9:55013534-55013330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
38-338
               

               
Cow position:
               
chr9:49863748-49863444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
38-368
               

               
Cow position:
               
chr9:11968995-11969324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr9:49373992-49374333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
39-346
               

               
Cow position:
               
chr9:50125789-50125479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
39-373
               

               
Cow position:
               
chr9:3573275-3573611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr9:14975122-14974783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
39-384
               

               
Cow position:
               
chr9:50202363-50202722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
100, 273
               

               
Conread position:
               
40-236
               

               
Cow position:
               
chr9:61301168-61300972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
40-303
               

               
Cow position:
               
chr9:32388176-32387912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
40-373
               

               
Cow position:
               
chr9:52130822-52131159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 143
               

               
Conread position:
               
40-384
               

               
Cow position:
               
chr9:22152272-22151930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
224, 88
               

               
Conread position:
               
41-220
               

               
Cow position:
               
chr9:14519566-14519391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
43-321
               

               
Cow position:
               
chr9:17277078-17276801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
43-378
               

               
Cow position:
               
chr9:58614310-58614630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
43-384
               

               
Cow position:
               
chr9:56088264-56087915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
44-345
               

               
Cow position:
               
chr9:54411351-54411036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
44-371
               

               
Cow position:
               
chr9:32815466-32815781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
44-383
               

               
Cow position:
               
chr9:11123667-11123331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
45-332
               

               
Cow position:
               
chr9:35547081-35547372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr9:27355733-27356072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
104, 149
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr9:27358519-27358858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
104, 149
               

               
Conread position:
               
46-249
               

               
Cow position:
               
chr9:62631852-62631653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr9:22637915-22638247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr9:8901411-8901070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr9:55795574-55795909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
216, 151
               

               
Conread position:
               
46-385
               

               
Cow position:
               
chr9:28917667-28917325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
47-271
               

               
Cow position:
               
chr9:3924274-3924484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
47-272
               

               
Cow position:
               
chr9:7806136-7805919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
217, 17
               

               
Conread position:
               
47-375
               

               
Cow position:
               
chr9:9551906-9552234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr9:12280791-12281114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
47-382
               

               
Cow position:
               
chr9:27279123-27279460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 248
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr9:43623083-43623409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
48-282
               

               
Cow position:
               
chr9:53390391-53390133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr9:35845203-35844918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
48-331
               

               
Cow position:
               
chr9:53258237-53257952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr9:34283773-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
216, 30
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr9:43048798-43048482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr9:47591165-47590838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr9:52406990-52407313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
216, 5
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr9:11168565-11168881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
216, 5
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr9:20090876-20091194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr9:26403612-26403938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr9:26477032-26477369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
94, 5
               

               
Conread position:
               
49-235
               

               
Cow position:
               
chr9:31694218-31694027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chr9:35832795-35832582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
49-272
               

               
Cow position:
               
chr9:5110675-5110900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 128
               

               
Conread position:
               
49-315
               

               
Cow position:
               
chr9:33838489-33838227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
210, 91
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr9:13993977-13994285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
49-352
               

               
Cow position:
               
chr9:6951930-6952227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
49-368
               

               
Cow position:
               
chr9:40005296-40005612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
49-382
               

               
Cow position:
               
chr9:38792834-38793164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr9:17799455-17799782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr9:34286615-34286953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 306
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr9:48627840-48628180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
50-180
               

               
Cow position:
               
chr9:18716278-18716406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr9:53323967-53323795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr9:19657153-19656979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
50-229
               

               
Cow position:
               
chr9:21816351-21816531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
174, 95
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr9:26388036-26388208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
50-233
               

               
Cow position:
               
chr9:44918459-44918279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
50-234
               

               
Cow position:
               
chr9:5172716-5172530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
50-241
               

               
Cow position:
               
chr9:17785749-17785556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 140
               

               
Conread position:
               
50-244
               

               
Cow position:
               
chr9:8592610-8592411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
50-248
               

               
Cow position:
               
chr9:5068657-5068858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
50-249
               

               
Cow position:
               
chr9:8613392-8613193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
50-249
               

               
Cow position:
               
chr9:36401840-36401647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
50-252
               

               
Cow position:
               
chr9:11950213-11950009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 137
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr9:43679939-43680144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
50-258
               

               
Cow position:
               
chr9:59897416-59897616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chr9:35306529-35306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr9:42586729-42586519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
50-271
               

               
Cow position:
               
chr9:33347662-33347449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
50-274
               

               
Cow position:
               
chr9:14738073-14738293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr9:59699732-59699494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr9:19771180-19771443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr9:61351525-61351261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 241
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr9:50382499-50382239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr9:8834311-8834037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
50-332
               

               
Cow position:
               
chr9:28263337-28263618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr9:13744115-13743797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr9:6189542-6189235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr9:38624804-38624493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr9:5456352-5456031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr9:6934262-6933928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 181
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr9:35028347-35028022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
96, 136
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr9:20579768-20579457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
253, 90
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr9:32670125-32669799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr9:7952720-7953049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
50-382
               

               
Cow position:
               
chr9:18380687-18381010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
50-382
               

               
Cow position:
               
chr9:29824837-29825187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr9:5500684-5501009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr9:6397965-6397629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr9:8723611-8723945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr9:9403351-9403024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr9:54681341-54681657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:28747699-28747371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:30137943-30138281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:33219139-33218799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:40215068-40215396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:40303314-40302976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:44709654-44709978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:48563898-48564235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
107, 135
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:51721070-51720749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr9:52638349-52638007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr9:1867291-1867609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
253, 41
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr9:24748496-24748686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
51-249
               

               
Cow position:
               
chr9:36634323-36634526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr9:62144872-62145129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
51-378
               

               
Cow position:
               
chr9:33940418-33940751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr9:6192636-6192310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr9:12910579-12910249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 90
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr9:20847763-20848084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr9:25804648-25804987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 241
               

               
Conread position:
               
52-219
               

               
Cow position:
               
chr9:1917804-1917967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
52-220
               

               
Cow position:
               
chr9:60741362-60741195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr9:23840585-23840370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr9:34917355-34917163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr9:18226928-18226701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
52-290
               

               
Cow position:
               
chr9:52763930-52763699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
52-348
               

               
Cow position:
               
chr9:33584863-33584566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr9:5433467-5433791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
212, 70
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr9:10118844-10118512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
53-220
               

               
Cow position:
               
chr9:12268856-12269019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr9:6929972-6929784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr9:34423441-34423629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 118
               

               
Conread position:
               
53-248
               

               
Cow position:
               
chr9:32052099-32052293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
53-249
               

               
Cow position:
               
chr9:151689-151886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 141
               

               
Conread position:
               
53-252
               

               
Cow position:
               
chr9:36457819-36458020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
53-257
               

               
Cow position:
               
chr9:12129130-12129333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
53-262
               

               
Cow position:
               
chr9:22447471-22447263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
53-272
               

               
Cow position:
               
chr9:21292587-21292365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
53-272
               

               
Cow position:
               
chr9:22440650-22440440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
212, 88
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr9:28156523-28156737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 115
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr9:36627945-36628162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
211, 75
               

               
Conread position:
               
53-288
               

               
Cow position:
               
chr9:57131321-57131554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
53-325
               

               
Cow position:
               
chr9:8629089-8628822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
211, 88
               

               
Conread position:
               
53-334
               

               
Cow position:
               
chr9:9459812-9460078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr9:8636501-8636803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
53-373
               

               
Cow position:
               
chr9:60080715-60081047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
53-380
               

               
Cow position:
               
chr9:5263327-5263649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
53-380
               

               
Cow position:
               
chr9:6839815-6840150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
53-382
               

               
Cow position:
               
chr9:4341333-4341019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
53-382
               

               
Cow position:
               
chr9:9573143-9573483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
53-382
               

               
Cow position:
               
chr9:51620267-51620588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
53-383
               

               
Cow position:
               
chr9:9516926-9516617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr9:3378585-3378897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
209, 74
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr9:9443779-9443444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr9:13670460-13670785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
193, 20
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr9:18253098-18252770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr9:63785085-63784774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
54-244
               

               
Cow position:
               
chr9:32806305-32806116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 121
               

               
Conread position:
               
54-257
               

               
Cow position:
               
chr9:57642337-57642531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
54-282
               

               
Cow position:
               
chr9:5104586-5104351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
54-295
               

               
Cow position:
               
chr9:47214724-47214480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
54-355
               

               
Cow position:
               
chr9:5342422-5342129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
210, 91
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:6852227-6851915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:9596126-9595802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 72
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:11299849-11299538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 91
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:34375103-34374779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:36491080-36490739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:45141772-45141450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
54-384
               

               
Cow position:
               
chr9:58979229-58979550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr9:34666277-34666444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
55-249
               

               
Cow position:
               
chr9:40984329-40984523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-272
               

               
Cow position:
               
chr9:12786650-12786431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 169
               

               
Conread position:
               
56-353
               

               
Cow position:
               
chr9:41785047-41785342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
208, 70
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr9:31640501-31640169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
56-396
               

               
Cow position:
               
chr9:52513640-52513287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 257
               

               
Conread position:
               
56-442
               

               
Cow position:
               
chr9:39011641-39011271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
57-213
               

               
Cow position:
               
chr9:30194838-30194993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
57-220
               

               
Cow position:
               
chr9:55284514-55284355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
57-235
               

               
Cow position:
               
chr9:33101278-33101111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr9:49679937-49680121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 131
               

               
Conread position:
               
57-248
               

               
Cow position:
               
chr9:5357848-5358028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
57-260
               

               
Cow position:
               
chr9:9358384-9358181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
57-260
               

               
Cow position:
               
chr9:42508655-42508861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
57-265
               

               
Cow position:
               
chr9:54664675-54664887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
57-281
               

               
Cow position:
               
chr9:52518994-52518772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr9:4241234-4241458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr9:37198954-37199179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
57-314
               

               
Cow position:
               
chr9:59998203-59997950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 53
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr9:45728604-45728893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr9:647600-647893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
57-367
               

               
Cow position:
               
chr9:41282839-41283149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 233
               

               
Conread position:
               
57-369
               

               
Cow position:
               
chr9:31359431-31359738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:1751156-1751487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:12428676-12428357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:19034181-19034493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:26345135-26344816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:28726902-28726568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:32307407-32307084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:33114166-33114498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:50607103-50606796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
207, 70
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:56453173-56453481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 65
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:59013511-59013181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
207, 89
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr9:61302830-61303156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 82
               

               
Conread position:
               
57-401
               

               
Cow position:
               
chr9:5227333-5227000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 74
               

               
Conread position:
               
58-235
               

               
Cow position:
               
chr9:54677085-54677268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
58-273
               

               
Cow position:
               
chr9:11098623-11098413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
206, 80
               

               
Conread position:
               
58-275
               

               
Cow position:
               
chr9:12337728-12337947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
58-282
               

               
Cow position:
               
chr9:33151577-33151794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
206, 70
               

               
Conread position:
               
58-321
               

               
Cow position:
               
chr9:26102560-26102813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr9:17840851-17840579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
58-332
               

               
Cow position:
               
chr9:36453710-36453440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr9:53109079-53109369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr9:26440986-26440656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr9:13169837-13169511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr9:19555217-19555526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
213, 57
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr9:25556811-25557118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
206, 88
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr9:36410522-36410203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
58-384
               

               
Cow position:
               
chr9:55256721-55256398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 81
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr9:2026257-2026070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
59-247
               

               
Cow position:
               
chr9:22309028-22309213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
59-251
               

               
Cow position:
               
chr9:1403707-1403515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
59-252
               

               
Cow position:
               
chr9:34276384-34276189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr9:31344781-31344583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
59-256
               

               
Cow position:
               
chr9:19718505-19718315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
59-263
               

               
Cow position:
               
chr9:37951071-37950866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr9:34484419-34484635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
59-274
               

               
Cow position:
               
chr9:48016818-48017025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
167, 68
               

               
Conread position:
               
59-332
               

               
Cow position:
               
chr9:8716956-8716668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
59-351
               

               
Cow position:
               
chr9:8547638-8547933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
59-352
               

               
Cow position:
               
chr9:5900125-5899841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr9:37934410-37934102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr9:21460324-21460016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr9:32676506-32676816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr9:34410564-34410259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
59-373
               

               
Cow position:
               
chr9:32348994-32348680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr9:10650459-10650161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
59-378
               

               
Cow position:
               
chr9:42264050-42264353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr9:20815695-20816010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 102
               

               
Conread position:
               
59-383
               

               
Cow position:
               
chr9:20901289-20900971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
59-383
               

               
Cow position:
               
chr9:33597802-33598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 230
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr9:20942790-20942456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr9:24887034-24887352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 232
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr9:28772970-28773274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
246, 42
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr9:61022448-61022763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 184
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr9:45285710-45285376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 294
               

               
Conread position:
               
60-241
               

               
Cow position:
               
chr9:28315254-28315439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
60-249
               

               
Cow position:
               
chr9:9557513-9557704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 81
               

               
Conread position:
               
60-249
               

               
Cow position:
               
chr9:52257630-52257445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
60-252
               

               
Cow position:
               
chr9:5187030-5186846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
60-260
               

               
Cow position:
               
chr9:40603497-40603697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-268
               

               
Cow position:
               
chr9:12773524-12773726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
60-271
               

               
Cow position:
               
chr9:44584431-44584634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 67
               

               
Conread position:
               
60-274
               

               
Cow position:
               
chr9:27345759-27345540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
60-304
               

               
Cow position:
               
chr9:63361881-63361647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
204, 67
               

               
Conread position:
               
60-333
               

               
Cow position:
               
chr9:56032487-56032217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
60-345
               

               
Cow position:
               
chr9:23956147-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 89
               

               
Conread position:
               
60-366
               

               
Cow position:
               
chr9:51566668-51566360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 258
               

               
Conread position:
               
60-379
               

               
Cow position:
               
chr9:15215860-15215541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr9:15806096-15805773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
60-384
               

               
Cow position:
               
chr9:52267932-52267604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
61-247
               

               
Cow position:
               
chr9:61286592-61286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 90
               

               
Conread position:
               
61-290
               

               
Cow position:
               
chr9:44759096-44758874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
61-378
               

               
Cow position:
               
chr9:61738751-61739064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 269
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr9:17872276-17871951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 80
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr9:53139304-53138978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr9:60395218-60394898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 235
               

               
Conread position:
               
62-233
               

               
Cow position:
               
chr9:45740312-45740140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
62-247
               

               
Cow position:
               
chr9:61909216-61909404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr9:16300742-16300413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
64-232
               

               
Cow position:
               
chr9:11873461-11873303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
64-241
               

               
Cow position:
               
chr9:48901001-48900826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr9:43159589-43159804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
64-321
               

               
Cow position:
               
chr9:29819560-29819805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
200, 63
               

               
Conread position:
               
64-355
               

               
Cow position:
               
chr9:56065400-56065674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
202, 75
               

               
Conread position:
               
64-378
               

               
Cow position:
               
chr9:42497662-42497973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
192, 57
               

               
Conread position:
               
64-383
               

               
Cow position:
               
chr9:35167003-35167324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr9:34689771-34689449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr9:41679596-41679898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 76
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr9:55117916-55118232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 157
               

               
Conread position:
               
65-261
               

               
Cow position:
               
chr9:34707475-34707282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
65-287
               

               
Cow position:
               
chr9:49402483-49402708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
65-310
               

               
Cow position:
               
chr9:33822952-33823200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr9:23388845-23388525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 153
               

               
Conread position:
               
66-247
               

               
Cow position:
               
chr9:26557801-26557984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 112
               

               
Conread position:
               
66-378
               

               
Cow position:
               
chr9:9753566-9753247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
67-305
               

               
Cow position:
               
chr9:22289600-22289837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
68-272
               

               
Cow position:
               
chr9:22165879-22165671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
68-378
               

               
Cow position:
               
chr9:3070579-3070274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 196
               

               
Conread position:
               
68-384
               

               
Cow position:
               
chr9:5835988-5836312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
68-384
               

               
Cow position:
               
chr9:30123768-30124073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 78
               

               
Conread position:
               
68-384
               

               
Cow position:
               
chr9:34958214-34957902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 77
               

               
Conread position:
               
69-368
               

               
Cow position:
               
chr9:22443784-22443491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
190, 70
               

               
Conread position:
               
69-373
               

               
Cow position:
               
chr9:1756312-1756003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
69-384
               

               
Cow position:
               
chr9:8936987-8937297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
69-384
               

               
Cow position:
               
chr9:9815252-9815568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
70-366
               

               
Cow position:
               
chr9:38846501-38846209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
70-383
               

               
Cow position:
               
chr9:29185300-29184981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
71-282
               

               
Cow position:
               
chr9:64310938-64310728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr9:32955853-32955616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
72-249
               

               
Cow position:
               
chr9:52998536-52998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
72-251
               

               
Cow position:
               
chr9:1712866-1712686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
72-252
               

               
Cow position:
               
chr9:37955332-37955150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
72-257
               

               
Cow position:
               
chr9:44944631-44944452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr9:25400345-25400099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
211, 55
               

               
Conread position:
               
72-342
               

               
Cow position:
               
chr9:21387272-21387533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
211, 64
               

               
Conread position:
               
72-348
               

               
Cow position:
               
chr9:21080415-21080679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr9:39211453-39211752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr9:12226143-12225837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
72-379
               

               
Cow position:
               
chr9:10010654-10010949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr9:26057587-26057287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
233, 23
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr9:52578696-52578384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
73-378
               

               
Cow position:
               
chr9:3185972-3186274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
191, 68
               

               
Conread position:
               
74-241
               

               
Cow position:
               
chr9:14357256-14357425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
74-247
               

               
Cow position:
               
chr9:32773066-32773229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
74-331
               

               
Cow position:
               
chr9:29195188-29194923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 218
               

               
Conread position:
               
74-349
               

               
Cow position:
               
chr9:54492982-54493255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
190, 65
               

               
Conread position:
               
74-355
               

               
Cow position:
               
chr9:29339468-29339201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
194, 42
               

               
Conread position:
               
74-381
               

               
Cow position:
               
chr9:62471521-62471818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
74-383
               

               
Cow position:
               
chr9:56772905-56773231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 162
               

               
Conread position:
               
74-384
               

               
Cow position:
               
chr9:55288045-55287745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
76-384
               

               
Cow position:
               
chr9:29006405-29006715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 83
               

               
Conread position:
               
77-332
               

               
Cow position:
               
chr9:31648061-31648318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
78-378
               

               
Cow position:
               
chr9:44834118-44833820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
79-272
               

               
Cow position:
               
chr9:20637224-20637415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
80-352
               

               
Cow position:
               
chr9:46930310-46930579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
80-378
               

               
Cow position:
               
chr9:24726818-24726533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
83-317
               

               
Cow position:
               
chr9:33541905-33542142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 208
               

               
Conread position:
               
84-384
               

               
Cow position:
               
chr9:767295-767000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
86-383
               

               
Cow position:
               
chr9:57897247-57896968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
87-236
               

               
Cow position:
               
chr9:54630170-54630315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
88-264
               

               
Cow position:
               
chr9:43202193-43202367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
90-384
               

               
Cow position:
               
chr9:33120031-33119733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 200
               

               
Conread position:
               
91-384
               

               
Cow position:
               
chr9:20416653-20416362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
91-384
               

               
Cow position:
               
chr9:52505448-52505154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
92-282
               

               
Cow position:
               
chr9:22466639-22466824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
92-384
               

               
Cow position:
               
chr9:26506976-26507278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
95-384
               

               
Cow position:
               
chr9:17741076-17740795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
95-384
               

               
Cow position:
               
chr9:44832183-44831902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
102-384
               

               
Cow position:
               
chr9:51204594-51204873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
105-376
               

               
Cow position:
               
chr9:6596350-6596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
105-383
               

               
Cow position:
               
chr9:48107236-48106966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
107-329
               

               
Cow position:
               
chr9:44770323-44770100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
107-396
               

               
Cow position:
               
chr9:41394773-41394491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
109-384
               

               
Cow position:
               
chr9:823838-824113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr9:49545483-49545298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 124
               

               
Conread position:
               
119-384
               

               
Cow position:
               
chr9:46316891-46316633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr9:50139180-50139439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 174
               

               
Conread position:
               
127-384
               

               
Cow position:
               
chr9:64155953-64155707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
128-309
               

               
Cow position:
               
chr9:53751061-53750877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
128-352
               

               
Cow position:
               
chr9:38645447-38645223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
128-363
               

               
Cow position:
               
chr9:17411294-17411060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
128-373
               

               
Cow position:
               
chr9:39681233-39681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
128-379
               

               
Cow position:
               
chr9:50081141-50080899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr9:9461757-9461502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
128-384
               

               
Cow position:
               
chr9:54528410-54528665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
128-388
               

               
Cow position:
               
chr9:62668145-62668409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
128-394
               

               
Cow position:
               
chr9:36445513-36445794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
129-339
               

               
Cow position:
               
chr9:18828158-18827947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
129-378
               

               
Cow position:
               
chr9:17310664-17310416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
129-382
               

               
Cow position:
               
chr9:3782270-3782511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
245, 23
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr9:9406153-9405898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr9:44467440-44467200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
130-383
               

               
Cow position:
               
chr9:5245753-5246007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
130-384
               

               
Cow position:
               
chr9:61997704-61997446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
131-255
               

               
Cow position:
               
chr9:26277731-26277852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
131-273
               

               
Cow position:
               
chr9:6293496-6293638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
131-282
               

               
Cow position:
               
chr9:16137440-16137290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
131-295
               

               
Cow position:
               
chr9:39758418-39758583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
131-366
               

               
Cow position:
               
chr9:8534798-8534556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 212
               

               
Conread position:
               
131-373
               

               
Cow position:
               
chr9:1520837-1520596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr9:37677794-37678030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr9:11313614-11313364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr9:9654407-9654161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
133, 91
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr9:1938026-1938282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr9:1972848-1973095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr9:3738324-3738069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 165
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr9:8288518-8288770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
136, 76
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr9:8562722-8562990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
133, 95
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr9:11319734-11319480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 154
               

               
Conread position:
               
132-262
               

               
Cow position:
               
chr9:35793578-35793708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-278
               

               
Cow position:
               
chr9:55354514-55354659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
132-282
               

               
Cow position:
               
chr9:19758620-19758771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
132-347
               

               
Cow position:
               
chr9:52598818-52598608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr9:18342634-18342877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 144
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr9:21888071-21888322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr9:55084398-55084144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr9:64091582-64091837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
132-385
               

               
Cow position:
               
chr9:18217196-18216950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
133-326
               

               
Cow position:
               
chr9:23797139-23797331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr9:5594406-5594652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr9:28354421-28354671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr9:31079175-31078930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr9:42446078-42445826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr9:7634176-7634426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr9:30652806-30652553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr9:4646419-4646180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr9:49293237-49292994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr9:4268078-4267831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
129, 169
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr9:17518585-17518336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 164
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr9:50543521-50543269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr9:62442194-62442445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr9:28378875-28379080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr9:52839972-52839739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr9:33696942-33697179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
138-325
               

               
Cow position:
               
chr9:54615391-54615208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
139-364
               

               
Cow position:
               
chr9:55075219-55075001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
139-384
               

               
Cow position:
               
chr9:32371843-32371608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
141-272
               

               
Cow position:
               
chr9:34014337-34014207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
146-256
               

               
Cow position:
               
chr9:49830760-49830869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr9:3343664-3343865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 155
               

               
Conread position:
               
146-373
               

               
Cow position:
               
chr9:10819913-10819691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 97
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr9:35105875-35105645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr9:3220051-3220283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 158
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr9:31814471-31814228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr9:5219257-5219021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr9:5763715-5763481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr9:19713995-19714228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr9:43870890-43871132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr9:62357614-62357376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
147-330
               

               
Cow position:
               
chr9:9625094-9624912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr9:28754735-28754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
147-368
               

               
Cow position:
               
chr9:11304159-11303945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr9:43443720-43443943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr9:34468662-34468432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr9:37069643-37069416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr9:55321553-55321790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 136
               

               
Conread position:
               
147-384
               

               
Cow position:
               
chr9:62656719-62656949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
148-309
               

               
Cow position:
               
chr9:30780035-30780192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr9:7362945-7363169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
148-384
               

               
Cow position:
               
chr9:45756280-45756510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
149-368
               

               
Cow position:
               
chr9:15225378-15225162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr9:56204729-56204884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 72
               

               
Conread position:
               
151-366
               

               
Cow position:
               
chr9:58670663-58670866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
151-384
               

               
Cow position:
               
chr9:23431227-23430993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
151-384
               

               
Cow position:
               
chr9:60027117-60027350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
152-340
               

               
Cow position:
               
chr9:32982154-32981963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 135
               

               
Conread position:
               
152-343
               

               
Cow position:
               
chr9:26310426-26310620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
152-383
               

               
Cow position:
               
chr9:36843714-36843939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
152-384
               

               
Cow position:
               
chr9:5509644-5509874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
153-293
               

               
Cow position:
               
chr9:6685821-6685963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
155-381
               

               
Cow position:
               
chr9:5209507-5209730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
156-304
               

               
Cow position:
               
chr9:62908094-62907950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
156-384
               

               
Cow position:
               
chr9:24872761-24872984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr9:19493541-19493309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
158-377
               

               
Cow position:
               
chr9:29684071-29684293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 103
               

               
Conread position:
               
161-384
               

               
Cow position:
               
chr9:49416918-49417140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
165-368
               

               
Cow position:
               
chr9:41486308-41486104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
168-412
               

               
Cow position:
               
chr9:43936882-43937120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
174-380
               

               
Cow position:
               
chr9:17928700-17928908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr9:24997574-24997368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
179-368
               

               
Cow position:
               
chr9:43875771-43875577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
181-384
               

               
Cow position:
               
chr9:22114686-22114482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr9:27029749-27029551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr9:35904789-35904593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
190-384
               

               
Cow position:
               
chr9:41789243-41789436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
194-384
               

               
Cow position:
               
chr9:35375389-35375581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
194-384
               

               
Cow position:
               
chr9:35849867-35850052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
195-368
               

               
Cow position:
               
chr9:43013686-43013860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
201-384
               

               
Cow position:
               
chr9:38343860-38344043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
203-384
               

               
Cow position:
               
chr9:6225482-6225299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
204-397
               

               
Cow position:
               
chr9:35533980-35533786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
205-383
               

               
Cow position:
               
chr9:44921419-44921239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
207-384
               

               
Cow position:
               
chr9:1952294-1952116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
237-383
               

               
Cow position:
               
chr9:20811059-20810913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
244-384
               

               
Cow position:
               
chr9:42509129-42509267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 43
               
Show alignments to all cow chromosomes.