Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 487-900 |
| Cow position: | chr11:59907836-59908252 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 265 |
| Conread position: | 489-782 |
| Cow position: | chr11:8537577-8537261 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 489-885 |
| Cow position: | chr11:54301755-54302177 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 490-767 |
| Cow position: | chr11:40330952-40331245 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 492-881 |
| Cow position: | chr11:38088845-38088465 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 493-649 |
| Cow position: | chr11:52242899-52242743 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 493-866 |
| Cow position: | chr11:54811388-54811033 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 493-879 |
| Cow position: | chr11:62583861-62583469 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 493-898 |
| Cow position: | chr11:25812013-25811589 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 494-858 |
| Cow position: | chr11:18944762-18944392 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 494-880 |
| Cow position: | chr11:77625293-77625670 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 494-898 |
| Cow position: | chr11:50586303-50585893 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 496-900 |
| Cow position: | chr11:1961816-1961389 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 497-898 |
| Cow position: | chr11:50463497-50463095 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 500-738 |
| Cow position: | chr11:22349261-22349012 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 500-886 |
| Cow position: | chr11:53480092-53479712 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 501-869 |
| Cow position: | chr11:61067980-61067590 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 517-889 |
| Cow position: | chr11:23274533-23274159 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 543-885 |
| Cow position: | chr11:27632697-27633048 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 555-879 |
| Cow position: | chr11:59591324-59590983 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 564-898 |
| Cow position: | chr11:27616675-27616993 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 647-900 |
| Cow position: | chr11:27602197-27602445 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 654-887 |
| Cow position: | chr11:16338811-16339043 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 664-777 |
| Cow position: | chr11:77137866-77137754 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 664-876 |
| Cow position: | chr11:11245783-11245994 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 664-897 |
| Cow position: | chr11:41229661-41229890 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 688-885 |
| Cow position: | chr11:5933527-5933721 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 180, 96 |
| Conread position: | 690-880 |
| Cow position: | chr11:35904380-35904564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 694-900 |
| Cow position: | chr11:2375553-2375343 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 697-885 |
| Cow position: | chr11:63925820-63926004 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 171, 81 |
| Conread position: | 710-894 |
| Cow position: | chr11:16884100-16883923 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 710-896 |
| Cow position: | chr11:51469732-51469548 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 729-900 |
| Cow position: | chr11:52210759-52210594 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 139, 55 |
Show alignments to all cow chromosomes.