Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 465-896 |
| Cow position: | chr13:39609605-39610041 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 489-867 |
| Cow position: | chr13:59161397-59161769 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 168 |
| Conread position: | 493-660 |
| Cow position: | chr13:31450735-31450905 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 156 |
| Conread position: | 493-822 |
| Cow position: | chr13:34569959-34570299 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 165 |
| Conread position: | 493-880 |
| Cow position: | chr13:3714712-3715120 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 38, 215 |
| Conread position: | 493-884 |
| Cow position: | chr13:39848118-39847722 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 19, 306 |
| Conread position: | 493-885 |
| Cow position: | chr13:13181005-13180612 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 493-886 |
| Cow position: | chr13:19026377-19025966 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 494-836 |
| Cow position: | chr13:38880707-38880370 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 194 |
| Conread position: | 495-618 |
| Cow position: | chr13:43536368-43536244 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 495-756 |
| Cow position: | chr13:34781666-34781936 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 40, 153 |
| Conread position: | 498-885 |
| Cow position: | chr13:40137717-40138100 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 502-869 |
| Cow position: | chr13:41803416-41803814 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 33, 250 |
| Conread position: | 503-863 |
| Cow position: | chr13:54134412-54134779 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 503-885 |
| Cow position: | chr13:11689104-11689481 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 655-884 |
| Cow position: | chr13:42898105-42898338 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 664-782 |
| Cow position: | chr13:41975757-41975874 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 664-884 |
| Cow position: | chr13:45107501-45107713 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 667-883 |
| Cow position: | chr13:40252548-40252761 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 671-872 |
| Cow position: | chr13:23042819-23042623 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 65 |
Show alignments to all cow chromosomes.