Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 489-880 |
| Cow position: | chr15:19560212-19560610 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 489-884 |
| Cow position: | chr15:8569973-8569565 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 489-900 |
| Cow position: | chr15:22613396-22612990 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 172 |
| Conread position: | 489-900 |
| Cow position: | chr15:46940875-46941266 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 491-886 |
| Cow position: | chr15:4774804-4775213 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 250 |
| Conread position: | 493-881 |
| Cow position: | chr15:9841058-9840660 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 243 |
| Conread position: | 493-887 |
| Cow position: | chr15:20864305-20864682 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 495-649 |
| Cow position: | chr15:42232798-42232954 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 495-779 |
| Cow position: | chr15:33476331-33476624 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 515-883 |
| Cow position: | chr15:14121388-14121768 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 516-900 |
| Cow position: | chr15:11928188-11928590 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 526-746 |
| Cow position: | chr15:47980445-47980214 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 550-900 |
| Cow position: | chr15:27974090-27974453 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 576-864 |
| Cow position: | chr15:42625833-42626125 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 578-898 |
| Cow position: | chr15:4637222-4637554 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 211 |
| Conread position: | 664-880 |
| Cow position: | chr15:7244081-7244297 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 664-900 |
| Cow position: | chr15:32305733-32305498 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 668-880 |
| Cow position: | chr15:23983790-23983581 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 668-891 |
| Cow position: | chr15:47607990-47608211 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 669-879 |
| Cow position: | chr15:39554516-39554722 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 173, 109 |
| Conread position: | 669-885 |
| Cow position: | chr15:25654882-25654676 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 202, 21 |
| Conread position: | 669-900 |
| Cow position: | chr15:42535824-42535596 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 670-885 |
| Cow position: | chr15:12712296-12712508 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 168, 102 |
| Conread position: | 678-885 |
| Cow position: | chr15:51914459-51914665 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 706-897 |
| Cow position: | chr15:22917487-22917674 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 707-885 |
| Cow position: | chr15:15564137-15563960 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 719-881 |
| Cow position: | chr15:35859940-35859783 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 719-896 |
| Cow position: | chr15:9046890-9047063 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 723-896 |
| Cow position: | chr15:49320504-49320670 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.