Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 483-900 |
| Cow position: | chr18:18580797-18581220 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 489-811 |
| Cow position: | chr18:13757368-13757670 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 489-866 |
| Cow position: | chr18:19532583-19532198 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 489-871 |
| Cow position: | chr18:2312194-2311814 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 489-896 |
| Cow position: | chr18:23363638-23363247 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 490-785 |
| Cow position: | chr18:17207188-17206887 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 188 |
| Conread position: | 490-900 |
| Cow position: | chr18:5612678-5613080 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 490-900 |
| Cow position: | chr18:40049710-40049292 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 493-646 |
| Cow position: | chr18:1137542-1137388 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 495-772 |
| Cow position: | chr18:5909591-5909291 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 215 |
| Conread position: | 500-880 |
| Cow position: | chr18:9199940-9199550 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 503-782 |
| Cow position: | chr18:47474044-47474319 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 506-881 |
| Cow position: | chr18:40267049-40267431 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 552-805 |
| Cow position: | chr18:8166782-8167040 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 569-836 |
| Cow position: | chr18:23920348-23920074 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 578-898 |
| Cow position: | chr18:8225792-8226090 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 580-900 |
| Cow position: | chr18:15327938-15328255 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 111 |
| Conread position: | 664-781 |
| Cow position: | chr18:14147477-14147361 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 668-878 |
| Cow position: | chr18:32962868-32963061 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 199, 105 |
| Conread position: | 670-885 |
| Cow position: | chr18:34270324-34270113 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 72 |
| Conread position: | 679-894 |
| Cow position: | chr18:38019434-38019226 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 159, 53 |
| Conread position: | 694-891 |
| Cow position: | chr18:51994927-51995123 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 174, 90 |
| Conread position: | 709-896 |
| Cow position: | chr18:32941448-32941626 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 110, 49 |
| Conread position: | 717-900 |
| Cow position: | chr18:13792057-13792234 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 719-896 |
| Cow position: | chr18:50827053-50826883 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 61 |
| Conread position: | 720-896 |
| Cow position: | chr18:37671118-37671282 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 151, 58 |
Show alignments to all cow chromosomes.