Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 487-881 |
| Cow position: | chr19:30463166-30463589 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 489-743 |
| Cow position: | chr19:7745593-7745866 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 489-883 |
| Cow position: | chr19:46877215-46877610 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 292 |
| Conread position: | 493-732 |
| Cow position: | chr19:38127362-38127608 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 493-878 |
| Cow position: | chr19:18223141-18222757 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 502-812 |
| Cow position: | chr19:13634451-13634763 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 289 |
| Conread position: | 552-782 |
| Cow position: | chr19:28183793-28183558 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 576-900 |
| Cow position: | chr19:32485081-32485398 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 589-889 |
| Cow position: | chr19:49665157-49664851 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 664-900 |
| Cow position: | chr19:13034440-13034217 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 164, 71 |
| Conread position: | 667-885 |
| Cow position: | chr19:39863872-39863658 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 670-880 |
| Cow position: | chr19:41106562-41106352 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 674-900 |
| Cow position: | chr19:15105421-15105209 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 675-879 |
| Cow position: | chr19:14923427-14923617 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 689-880 |
| Cow position: | chr19:42769844-42770031 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 134, 100 |
| Conread position: | 689-898 |
| Cow position: | chr19:29135218-29135419 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 179, 77 |
| Conread position: | 690-880 |
| Cow position: | chr19:19436086-19436268 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 694-863 |
| Cow position: | chr19:44504146-44504311 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 719-885 |
| Cow position: | chr19:7746450-7746617 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 63 |
| Conread position: | 719-894 |
| Cow position: | chr19:17805285-17805463 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 10 |
Show alignments to all cow chromosomes.