Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 445-633 |
| Cow position: | chr2:14645235-14645043 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 446-900 |
| Cow position: | chr2:22639440-22639886 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 483-900 |
| Cow position: | chr2:56544793-56544356 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 488-885 |
| Cow position: | chr2:2052705-2053110 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 247 |
| Conread position: | 489-626 |
| Cow position: | chr2:73791535-73791673 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 489-743 |
| Cow position: | chr2:52844546-52844277 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 246 |
| Conread position: | 489-880 |
| Cow position: | chr2:61862555-61862962 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 489-885 |
| Cow position: | chr2:1162812-1163212 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 489-885 |
| Cow position: | chr2:12366554-12366947 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 490-743 |
| Cow position: | chr2:6338146-6337886 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 490-744 |
| Cow position: | chr2:10871434-10871683 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 490-880 |
| Cow position: | chr2:16783735-16784152 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 317 |
| Conread position: | 492-878 |
| Cow position: | chr2:62058488-62058102 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 492-883 |
| Cow position: | chr2:62491792-62491391 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 493-869 |
| Cow position: | chr2:22246695-22247104 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 109 |
| Conread position: | 493-900 |
| Cow position: | chr2:65923893-65923473 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 272 |
| Conread position: | 494-735 |
| Cow position: | chr2:59421910-59422156 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 494-881 |
| Cow position: | chr2:54333261-54332876 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 494-889 |
| Cow position: | chr2:39075789-39076184 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 494-889 |
| Cow position: | chr2:72224531-72224149 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 495-891 |
| Cow position: | chr2:81354356-81353950 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 495-900 |
| Cow position: | chr2:24042243-24041818 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 499-834 |
| Cow position: | chr2:2387483-2387138 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 288 |
| Conread position: | 500-898 |
| Cow position: | chr2:25251872-25252297 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 34, 242 |
| Conread position: | 501-887 |
| Cow position: | chr2:74992748-74993127 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 503-879 |
| Cow position: | chr2:74556380-74556764 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 28, 231 |
| Conread position: | 531-823 |
| Cow position: | chr2:62359936-62359642 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 536-885 |
| Cow position: | chr2:71770657-71770269 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 341 |
| Conread position: | 538-900 |
| Cow position: | chr2:69849948-69849578 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 543-869 |
| Cow position: | chr2:80086904-80086584 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 549-882 |
| Cow position: | chr2:18769774-18770118 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 554-889 |
| Cow position: | chr2:76056852-76057198 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 578-756 |
| Cow position: | chr2:59135573-59135393 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 591-900 |
| Cow position: | chr2:41693287-41693595 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 64, 191 |
| Conread position: | 658-863 |
| Cow position: | chr2:80323965-80323765 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 664-900 |
| Cow position: | chr2:13833336-13833090 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 667-869 |
| Cow position: | chr2:22715190-22714990 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 667-886 |
| Cow position: | chr2:32439231-32439011 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 52, 117 |
| Conread position: | 667-899 |
| Cow position: | chr2:29386455-29386680 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 670-900 |
| Cow position: | chr2:29186087-29185871 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 672-869 |
| Cow position: | chr2:76811670-76811871 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 672-895 |
| Cow position: | chr2:72290302-72290077 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 674-881 |
| Cow position: | chr2:37887988-37887777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 140, 105 |
| Conread position: | 674-898 |
| Cow position: | chr2:41456691-41456475 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 674-900 |
| Cow position: | chr2:26284260-26284044 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 690-882 |
| Cow position: | chr2:52842713-52842522 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 145, 72 |
| Conread position: | 691-885 |
| Cow position: | chr2:20784109-20783916 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 697-887 |
| Cow position: | chr2:36271257-36271447 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 718-886 |
| Cow position: | chr2:85099792-85099634 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 719-883 |
| Cow position: | chr2:43229260-43229425 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 720-881 |
| Cow position: | chr2:8108592-8108751 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 720-889 |
| Cow position: | chr2:1184244-1184078 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 64 |
| Conread position: | 724-885 |
| Cow position: | chr2:26518772-26518931 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 10 |
Show alignments to all cow chromosomes.